cluster # 9743

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Schistosoma mansoni
cluster # 9743 cluster # 9743 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9743#0 length = 1265 sequences # 3
consensus_9743#1 length = 909 sequences # 2
consensus_9743#2 length = 894 sequences # 2

consensus_9743#3 length = 817 sequences # 2
consensus_9743#4 length = 402 sequences # 1
consensus_9743#5 length = 187 sequences # 1

consensusID : consensus_9743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1265
fasta sequence

                              [AGGCCATTAATTCGGCACGCAGGAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATCAATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTAATAATACTACTTATTCTACATCCATCGTATGTACTACTAATCCGAATGGCATTACTACTACTAATACTGTTGCCACAAATATCAGTACTATGAATACTCATATTCATGAACGCGACGTGGTCAATCCATTGCCGATTCATATTCAAGAAGAAATGACTAAAATCCCTGTTGAAAAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAGAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTACATTTCGTAGAGACAAAAACACANATTCAAGTTTCAGATGATATTGATTGGAGTAGATTAGCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTTGAAAGAAAACCCTTCATTNTTTNCTCTATATGCAGTAACACCTTATAGGGTTTACACAACATNATTATGATAGCACCAATCACTTTTAGACTAACCCACAATCATTTGGTTCGTTTAAAATTCACCCAGCTCACCAATGTATCTCTCAGTTGAGTGATATCTATNNNTCTCTGTGTACACTACAATACGCTTTGATCCTCTCTGACTCTTTGTACATTTNCATCTGGGGAAGAATGATTTTGNCCACTTCTGGCTACAGAATATNNGATCGCCATCCTTGAGTCTTCTCTATATGATGACGACGACATGTGATCTATTTTATCAAGTACCACGAGCTATGAAGCTTTGACGGATACTTGGAAACAGAAAAGATTGA]

[+] EMBL CD081771             [AGGCCATTAATTCGGCACGCAGGAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATCAATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTAATAATACTACTTATTCTACATCCATCGTATGTACTACTAATCCGAATGGCATTACTACTACTAATACTGTTGCCACAAATATCAGTACTATGAATACTCATATTCATGAACGCGACGTGGTCAATCCATTGCCGATTCATATTCAAGAAGAAATGACTAAAATCCCTGTTGAAAAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAGAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTACATTTCGTAGAGACAAAAACACANATTCAAGTTTCAGATGATATTGATTGGAGTAGATTAGCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTTGAAAGAAAACCCTTCATTNTTTNCTCTATATGCAGTAACACCTTATAGGGTTTACACAACATNATTATGATAGCACCAATCACTTTTAGACTAACCCACAATCATTTGGTTCGTTTAAAATTCACCCAGCTCACCAATGTATCTCTCAGTTGAGTGATATCTATNNNTCTCTGTGTACACTACAATACGCTTTGATCCTCTCTGACTCTTTGTACATTTNCATCTGGGGAAGAATGATTTTGNCCACTTCTGGCTACAGAATATNNGATCGCCATCCTTGAGTCTTCTCTATATGATGACGACGACATGTGATCTATTTTATCAAGTACCACGAGCTATGAAGCTTTGACGGATACTTGGAAACAGAAAAGATTGA]
[+] EMBL CD084094             [                                                                                                                                                                                                                                                                                                                                                         aggCCGAATGGCATTACTACTACTAATACTGTTGCCACAAATATCAGTACTATGAATACTCATATTCATGAACGCGACGTGGTCAATCCATTGCCGATTCATATTCAAGAAGAAATGACTAAAATCCCTGTTGAAAAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAAAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTACATTTCGTAGAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD077999             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGACTAAAATCCCTGTTGAAAAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAGAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGNGTAGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_9743#0
AGGCCATTAATTCGGCACGCAGGAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAAT
AACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATC
AATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAA
ACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAA
CAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAAT
ATCACTAATAATACTACTTATTCTACATCCATCGTATGTACTACTAATCCGAATGGCATT
ACTACTACTAATACTGTTGCCACAAATATCAGTACTATGAATACTCATATTCATGAACGC
GACGTGGTCAATCCATTGCCGATTCATATTCAAGAAGAAATGACTAAAATCCCTGTTGAA
AAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACAAAAACA
CGGCATACTGAGCCAAAGAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACT
GCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTC
AAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACAC
CATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTA
CATTTCGTAGAGACAAAAACACANATTCAAGTTTCAGATGATATTGATTGGAGTAGATTA
GCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTTGAAAGAAAACC
CTTCATTNTTTNCTCTATATGCAGTAACACCTTATAGGGTTTACACAACATNATTATGAT
AGCACCAATCACTTTTAGACTAACCCACAATCATTTGGTTCGTTTAAAATTCACCCAGCT
CACCAATGTATCTCTCAGTTGAGTGATATCTATNNNTCTCTGTGTACACTACAATACGCT
TTGATCCTCTCTGACTCTTTGTACATTTNCATCTGGGGAAGAATGATTTTGNCCACTTCT
GGCTACAGAATATNNGATCGCCATCCTTGAGTCTTCTCTATATGATGACGACGACATGTG
ATCTATTTTATCAAGTACCACGAGCTATGAAGCTTTGACGGATACTTGGAAACAGAAAAG
ATTGA

consensusID : consensus_9743#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 909
fasta sequence

                              [AGCTGATATCTTTTGAGAAGAGCAAATGAAAATATGAAATCTACTGACAATTCTATTCAAGACAATAGAAAATCAGCACTGGCGGAAAAAGCTATTATCGCACCAAAACCTTTTCACAAAATAAAACGATCATCTTCACCCGAAACAAATAAGTGCAATGTTAAATATTCAACACCTGCCGTTGGTAAAAAATTGAAATTGGAGTCTGAATTTGCAAATTTTAAATCTCAATGTAAAAGTGAAACGATTTCACCAATAAAAAAATCAGGTTCTGCGATAGACAAACACGGTGTTTGTGAAAGTGAAGATAGTGATTTCATGGATTTCAGTGACGACGGAGAGGGGACAAAACATCCTACAAACTTGAAGAATAAATCTATGAACAAAGACCAAACTTTAAACTATTTCTGGACAAAACAACTACAATCTGATAGCAGAACTGAAGGAAACGGTAAGCTAAACAAAAATGCAAATAACCAATGGGATTCGACAGAAGTTGACCCCGATATCAAAGGATGTAATCGAATCCTAGTGCAAAATAAAGATCGTTCTCCAGACCTTAGTGATGATGATGACGACAATGGAAGAGAAATAAAGCGACATCCACAACTAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATCAATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTAGTAATACTACTTAT]

[-] EMBL CD122825             [AGCTGATATCTTTTGAGAAGAGCAAATGAAAATATGAAATCTACTGACAATTCTATTCAAGACAATAGAAAATCAGCACTGGCGGAAAAAGCTATTATCGCACCAAAACCTTTTCACAAAATAAAACGATCATCTTCACCCGAAACAAATAAGTGCAATGTTAAATATTCAACACCTGCCGTTGGTAAAAAATTGAAATTGGAGTCTGAATTTGCAAATTTTAAATCTCAATGTAAAAGTGAAACGATTTCACCAATAAAAAAATCAGGTTCTGCGATAGACAAACACGGTGTTTGTGAAAGTGAAGATAGTGATTTCATGGATTTCAGTGACGACGGAGAGGGGACAAAACATCCTACAAACTTGAAGAATAAATCTATGAACAAAGACCAAACTTTAAACTATTTCTGGACAAAACAACTACAATCTGATAGCAGAACTGAAGGAAACGGTAAGCTAAACAAAAATGCAAATAACCAATGGGATTCGACAGAAGTTGACCCCGATATCAAAGGATGTAATCGAATCCTAGTGCAAAATAAAGATCGTTCTCCAGACCTTAGTGATGATGATGACGACAATGGAAGAGAAATAAAGCGA                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD167791             [                                                                                                                                                                                                                                                                                                                                                                                 AATAAATCTATGAACAAAGACCAAACTTTAAACTATTTCTGGACAAAACAACTACAATCTGATAGCAGAACTGAAGGAAACGGTAAGCTAAACAAAAATGCAAATAACCAATGGGATTCGACAGAAGTTGACCCCGATATCAAAGGATGTGATCGAATCCTAGTGCAAAATAAAGATCGTTCTCCAGACCTTAGTGATGATGATGACGACAATGGAAGAGAAATAAAGCGACATCCACAACTAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATCAATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTAGTAATACTACTTAT]




>consensus_9743#1
AGCTGATATCTTTTGAGAAGAGCAAATGAAAATATGAAATCTACTGACAATTCTATTCAA
GACAATAGAAAATCAGCACTGGCGGAAAAAGCTATTATCGCACCAAAACCTTTTCACAAA
ATAAAACGATCATCTTCACCCGAAACAAATAAGTGCAATGTTAAATATTCAACACCTGCC
GTTGGTAAAAAATTGAAATTGGAGTCTGAATTTGCAAATTTTAAATCTCAATGTAAAAGT
GAAACGATTTCACCAATAAAAAAATCAGGTTCTGCGATAGACAAACACGGTGTTTGTGAA
AGTGAAGATAGTGATTTCATGGATTTCAGTGACGACGGAGAGGGGACAAAACATCCTACA
AACTTGAAGAATAAATCTATGAACAAAGACCAAACTTTAAACTATTTCTGGACAAAACAA
CTACAATCTGATAGCAGAACTGAAGGAAACGGTAAGCTAAACAAAAATGCAAATAACCAA
TGGGATTCGACAGAAGTTGACCCCGATATCAAAGGATGTAATCGAATCCTAGTGCAAAAT
AAAGATCGTTCTCCAGACCTTAGTGATGATGATGACGACAATGGAAGAGAAATAAAGCGA
CATCCACAACTAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTACC
AGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATCAATAACAATGAT
AATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGATCTAAA
CCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTAATAAA
ACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTAGTAAT
ACTACTTAT

consensusID : consensus_9743#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 894
fasta sequence

                              [CATTTACTGTCTCTAAAAACTAAAAACATATGAATGAGCACTTCTGGTTAAATAGTAATTATATAACGTTAAAAAATATATGATAATCACCTTATTAAAAGCACTGTGGACCTCAGCAACTGATAGGAAAAGGGGGCAACAACAAGCAATGTTTCATGTTTTAAAAATTACAATATCGTTTAGTGCAACATCGGAAACAATGTATAAGTTGATAATAATAACCTAATATTTGTCACTACGTCGACAGAGGTTATTTTCAGTTATAAATTCAACACGACAGTAGGGATTTATTTGACGTATTTTTATTTCTGTACTCCGTAGGATGCATTCAAATCGGTCGCCAAAAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCAGTAAAATTCTTTTATTATTTGAATATGTTCAGTATGTAAACAAAATATTACTGTATACTCTCGTATAAAGTTGTCACCAGGATACAATTGAATAAGCTGACCGTTGAAAAATGCAAACTGTCTTCCTTCAAAAATTTTAACGTATTTGTGTTAAAACCGCATTCCATGAGATCTTTTTCATTGGATACAGAATCATTATTAGTTGGATTCCCATTGTTTATCGTATCCGATTGTTGAGACATTAGAATACGTTGAACTTCTCGTCGTTTACGCCTAGTATGTGTCCATGTATTTACTGTTGCTGTAATATTTAAATGCAGACCACCTAGTTCAGCACGATTTTTTTGGTCTAATACTTTCATACCTAATTGTTTAAATTCATATCTCAACCAATCCAAAAGAGCATCAACTGTATTTTCAGGAAGACAAGATACTGAATCCGGCAGTTGCAGTGTTAATGGAGGACGTTCTAATTTACGAAGTCGGCGGAAATCAGATTCAGG]

[+] EMBL CD073355             [CATTTACTGTCTCTAAAAACTAAAAACATATGAATGAGCACTTCTGGTTAAATAGTAATTATATAACGTTAAAAAATATATGATAATCACCTTATTAAAAGCACTGTGGACCTCAGCAACTGATAGGAAAAGGGGGCAACAACAAGCAATGTTTCATGTTTTAAAAATTACAATATCGTTTAGTGCAACATCGGAAACAATGTATAAGTTGATAATAATAACCTAATATTTGTCACTACGTCGACAGAGGTTATTTTCAGTTATAAATTCAACACGACAGTAGGGATTTATTTGACGTATTTTTATTTCTGTACTCCGTAGGATGCATTCAAATCGGTCGCCAAAAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCAGTAAAATTCTTTTATTATTTGAATATGTTCAGTATGTAAACAAAATATTACTGTATACTCTCGTATAAAGTTGTCACCAGGATACAATTGAATAAGCTGACCGTTGAAAAATGCAAACTGTCTTCCTTCAAAAATTTT                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD078896             [                                                                                                                                                                                                                                                                       TAAATTCAACACGACAGTAGGGATTTATTTGACGTATTTNTATTTCTGTACTCCGTAGGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCAGTAAGATTCTTTTATTATTTGAATATGTTCAGTATGTAGACAAAATATTACTGTATACTCTCGTATAGAGTTGTCACCAGGATACAATTGAATAAGCTGACCGTTGAAAAATGCAAACTGTCTTCCTTCAGAAATTTTAACGTATTTGTGTTAAAACCGCATTCCATGAGATCTTTTTCATTGGATACAGAATCATTATTAGTTGGATTCCCATTGTTTATCGTATCCGATTGTTGAGACATTAGAATACGTTGAACTTCTCGTCGTTTACGCCTAGTATGTGTCCATGTATTTACTGTTGCTGTAATATTTAAATGCAGACCACCTAGTTCAGCACGATTTTTTTGGTCTAATACTTTCATACCTAATTGTTTAAATTCATATCTCAACCAATCCAAAAGAGCATCAACTGTATTTTCAGGAAGACAAGATACTGAATCCGGCAGTTGCAGTGTTAATGGAGGACGTTCTAATTTACGAAGTCGGCGGAAATCAGATTCAGG]




>consensus_9743#2
CATTTACTGTCTCTAAAAACTAAAAACATATGAATGAGCACTTCTGGTTAAATAGTAATT
ATATAACGTTAAAAAATATATGATAATCACCTTATTAAAAGCACTGTGGACCTCAGCAAC
TGATAGGAAAAGGGGGCAACAACAAGCAATGTTTCATGTTTTAAAAATTACAATATCGTT
TAGTGCAACATCGGAAACAATGTATAAGTTGATAATAATAACCTAATATTTGTCACTACG
TCGACAGAGGTTATTTTCAGTTATAAATTCAACACGACAGTAGGGATTTATTTGACGTAT
TTTTATTTCTGTACTCCGTAGGATGCATTCAAATCGGTCGCCAAAAAATTGACTCGGAAG
CTGCTCACACACCATGAAGTCGACATATTCAGTAAAATTCTTTTATTATTTGAATATGTT
CAGTATGTAAACAAAATATTACTGTATACTCTCGTATAAAGTTGTCACCAGGATACAATT
GAATAAGCTGACCGTTGAAAAATGCAAACTGTCTTCCTTCAAAAATTTTAACGTATTTGT
GTTAAAACCGCATTCCATGAGATCTTTTTCATTGGATACAGAATCATTATTAGTTGGATT
CCCATTGTTTATCGTATCCGATTGTTGAGACATTAGAATACGTTGAACTTCTCGTCGTTT
ACGCCTAGTATGTGTCCATGTATTTACTGTTGCTGTAATATTTAAATGCAGACCACCTAG
TTCAGCACGATTTTTTTGGTCTAATACTTTCATACCTAATTGTTTAAATTCATATCTCAA
CCAATCCAAAAGAGCATCAACTGTATTTTCAGGAAGACAAGATACTGAATCCGGCAGTTG
CAGTGTTAATGGAGGACGTTCTAATTTACGAAGTCGGCGGAAATCAGATTCAGG

consensusID : consensus_9743#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 817
fasta sequence

                              [ATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTACATTTCGTAGAGACAAAAACACAAATTCAAGTTTCAGATGATATTGATTGGAGTAGATTAGCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTTGAAAGAAAACCCTTCATTTTTTCTTCTATATGCAGTAACACCTTATAGGTTTACCCAAACATATTATGATAAGCCCCAATCACTTTTAGACTAACCCCAAATCATTTGGTTCGTTTAAAATTTCACCCAAGCTCACCAATTGTAATCTCTTCAGTTGAGTGATTATCTATTTTCTCCTTGTGTACACTAACAATTACGCTTTGTATCCCTCTCTGACTCTTTGTTACATCTTTCATCTTGTGTAAGTAATGATTTTTGTCCACTTTCTGTCTTACGAGAATTATTGATTTCGCCCATCTTTGTAGTTCTTTTCTCTTATAAATGAATGACCGATCGACCCATGTAGAATCATATTTTTTTAATCCAGAGTAACCCCAGAAAGCTTATATGAAAGCTTCTGTACCGGATAACATTTGT-AAACACAAGAAACAAAGGGCTGAATATATATATTTTTGGGAATGTTGTTTTATCACTTTTTCCCTTATCCACAAAAAAGTTCTTTCTGCAATAAAAAAAT]

[-] EMBL CD075502             [ATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGCTGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATCAATTGCTGGTACATTTCGTAGAGACAAAAACACAAATTCAAGTTTCAGATGATATTGATTGGAGTAGATTAGCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTTGAAAGAAAACCCTTCATTTTTTCTTCTATATGCAGTAACACCTTATAGGTTTACCCAAACATATTATGATAAGCCCCAATCACTTTTAGACTAACCCCAAATCATTTGGTTCGTTTAAAATTTCACCCAAGCTCACCAATTGTAATCTCTTCAGTTGAGTGATTATCTATTTTCTCCTTGTGTACACTAACAATTACGCTTTGTATCCCTCTCTGACTCTTTGTTACATCTTTCATCTTGTGTAAGTAATGATTTTTGTCCACTTTCTGTCTTACGAGAATTATTGATTTCGCCCATCTTTGTAGTTCTTTTCTCTTATAAATGAATGACCGATCGACCCATGTAGAATCATATTTTTTTAATCCAGAGTAACCCCAGAAAGCTTATATGAAAGCTTCTGTACCGGATAACATTTGT AAACACAAGAAACAAAGGGCTGAATATATA                                                                      ]
[-] EMBL CD076893             [                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCACCCAAGCTCACCAATTGTAATCTCTTCAGTTGAGTGATTATCTATTTTCTCCTTGTGTACACTAACAATTACGCTTTGTATCCCTCTCTGACTCTTTGTTACATCTTTCATCTTGTGTAAGTAATGATTTTTGTCCACTTTCTGTCTTACGAGAATTATTGATTTCGCCCATCTTTGTAGTTCTTTTCTCTTATAAATGAATGACCGATCGACCCATGTAGAATCATATTTTTTTAATCCAGAGTAACCACAGAAAGCTTATATGAAAGCTTCTGTACCGGATAACATTTGTGAAACACAAGAAACAAAGATCTGAATATATATATTTTTGGGAATGTTGTTTTATCACTTTTTCCCTTATCCACAAAAAAGTTCTTTCTGCAATAAAAAAAT]




>consensus_9743#3
ATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCA
AAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCGCCAAGAAATTGACTCGGAAGC
TGCTCACACACCATGAAGTCGACATATTCACTAAATCAAGGTTAGATCAATTGATCGATC
AATTGCTGGTACATTTCGTAGAGACAAAAACACAAATTCAAGTTTCAGATGATATTGATT
GGAGTAGATTAGCTGGGATATTTTTAAGGCTCCCGTGAAGATAAGATTAAAAAGTGATTT
GAAAGAAAACCCTTCATTTTTTCTTCTATATGCAGTAACACCTTATAGGTTTACCCAAAC
ATATTATGATAAGCCCCAATCACTTTTAGACTAACCCCAAATCATTTGGTTCGTTTAAAA
TTTCACCCAAGCTCACCAATTGTAATCTCTTCAGTTGAGTGATTATCTATTTTCTCCTTG
TGTACACTAACAATTACGCTTTGTATCCCTCTCTGACTCTTTGTTACATCTTTCATCTTG
TGTAAGTAATGATTTTTGTCCACTTTCTGTCTTACGAGAATTATTGATTTCGCCCATCTT
TGTAGTTCTTTTCTCTTATAAATGAATGACCGATCGACCCATGTAGAATCATATTTTTTT
AATCCAGAGTAACCCCAGAAAGCTTATATGAAAGCTTCTGTACCGGATAACATTTGTAAA
CACAAGAAACAAAGGGCTGAATATATATATTTTTGGGAATGTTGTTTTATCACTTTTTCC
CTTATCCACAAAAAAGTTCTTTCTGCAATAAAAAAAT

consensusID : consensus_9743#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [ACAGTTGATGCTCTTTTGGATTGGTTGAGATATGAATTTAAACAATTAGGTATGAAAGTATTAGACCAAAAAAATCGTGCTGAACTAGGTGGTCTGCATTTAAATATTACAGCAACAGTAAATACATGGACACATACTAGGCGTAAACGACGAGAAGTTCAACGTATTCTAATGTCTCAACAATCGGATACGATAAACAATGGGAATCCAACTAATAATGATTCTGTATCCAATGAAAAAGATCTCGTGGAATGCGGTTTTAACACAAATACGGTAAGTTCTAGAAATCTTTCGAAGCGTATATATGATGATGATCCAGATGAAGTGAATAATTCATCAGAATCATTCACACAATCAACTTCAGAGACAAAACAGAGTAGTTCTGTGGTGGAATTAGTAAAT]

[+] EMBL CD124416             [ACAGTTGATGCTCTTTTGGATTGGTTGAGATATGAATTTAAACAATTAGGTATGAAAGTATTAGACCAAAAAAATCGTGCTGAACTAGGTGGTCTGCATTTAAATATTACAGCAACAGTAAATACATGGACACATACTAGGCGTAAACGACGAGAAGTTCAACGTATTCTAATGTCTCAACAATCGGATACGATAAACAATGGGAATCCAACTAATAATGATTCTGTATCCAATGAAAAAGATCTCGTGGAATGCGGTTTTAACACAAATACGGTAAGTTCTAGAAATCTTTCGAAGCGTATATATGATGATGATCCAGATGAAGTGAATAATTCATCAGAATCATTCACACAATCAACTTCAGAGACAAAACAGAGTAGTTCTGTGGTGGAATTAGTAAAT]




>consensus_9743#4
ACAGTTGATGCTCTTTTGGATTGGTTGAGATATGAATTTAAACAATTAGGTATGAAAGTA
TTAGACCAAAAAAATCGTGCTGAACTAGGTGGTCTGCATTTAAATATTACAGCAACAGTA
AATACATGGACACATACTAGGCGTAAACGACGAGAAGTTCAACGTATTCTAATGTCTCAA
CAATCGGATACGATAAACAATGGGAATCCAACTAATAATGATTCTGTATCCAATGAAAAA
GATCTCGTGGAATGCGGTTTTAACACAAATACGGTAAGTTCTAGAAATCTTTCGAAGCGT
ATATATGATGATGATCCAGATGAAGTGAATAATTCATCAGAATCATTCACACAATCAACT
TCAGAGACAAAACAGAGTAGTTCTGTGGTGGAATTAGTAAAT

consensusID : consensus_9743#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence

                              [CGTTTAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAAAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCAACTTGGGGT]

[+] EMBL CD126499             [CGTTTAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAAAAAGAAATTAATTCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCAACTTGGGGT]




>consensus_9743#5
CGTTTAATCGTGTCAATTCCGACAAAAACACGGCATACTGAGCCAAAAAAAGAAATTAAT
TCTGCATCTACTGAAATGAATTCATCTACTGCTGAATTAGCCAAACAAGTGGTAGCTTCT
CTGTCACGTCATTTTGCCAAAGGTTTATTCAAAAACAAAGATGCATTCAAATCGGTCAAC
TTGGGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9743#0      AGGCCATTAATTCGGCACGCAGGAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAAT 60
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      AACGAGGTTACCAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAACATGAGATC 120
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      AATAACAATGATAATATTGACTATACAAACAAGTCGGAATCATATAACACCATACCAGAA 180
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      ACAGGATCTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAA 240
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      CAAGGTAATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAAT 300
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      ATCACTAATAATACTACTTATTCTACATCCATCGTATGTACTACTAATCCGAATGGCATT 360
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      ACTACTACTAATACTGTTGCCACAAATATCAGTACTATGAATACTCATATTCATGAACGC 420
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      --------------------------------AGCTGATATCTTTTGAGAAGAGCAAATG 28
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      -------CATTTACTGTCTCTAAAAACTAAAAACATATGAATGAGCACTTCTGGTTAAAT 53
                                                                                  

consensus_9743#0      GACGTGGTCAATCCATTGCCGATTCATATTCAAGAAGAAATGACTAAAATCCCTGTTGAA 480
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      AAAATATGAAATCTACTGACAATTCTATTCAAGACAATAGAAAATCAGCACTGGCGGAAA 88
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      AGTAATTATATAACGTTAAAAAATATATGATAATCACCTTATTAAAAGCACTGTGGACCT 113
                                                                                  

consensus_9743#0      AAACAAATCCATCATAGACCGGTTAATCCTCGTTCAATCGTGTCAATTCCGACA----AA 536
consensus_9743#5      ------------------------------CGTTTAATCGTGTCAATTCCGACA----AA 26
consensus_9743#3      ------------------------------------------------------------
consensus_9743#1      AAGCTATTATCGCACCAAAACCTTTTCACAAAATAAAACG-ATCATCTTCACCC----GA 143
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      CAGCAACTGATAGGAAAAGGGGGCAACAACAAGCAATGTTTCATGTTTTAAAAATTACAA 173
                                                                                  

consensus_9743#0      AACACGGCATACTGAGCCAAAGAAAGAAATTAATTCTGCATCTACTGAAATGA-ATTCAT 595
consensus_9743#5      AACACGGCATACTGAGCCAAAAAAAGAAATTAATTCTGCATCTACTGAAATGA-ATTCAT 85
consensus_9743#3      ------------------------------------------------------ATTCAT 6
consensus_9743#1      AACAAATAAGTGCAATGTTAAATATTCAACACCTGCCGTTGGTAAAAAATTGA-A---AT 199
consensus_9743#4      ----------------------------------ACAGTTGATGCTCTTTTGG-ATTGGT 25
consensus_9743#2      TATCGTTTAGTGCAACATCGGAAACAATGTATAAGTTGATAATAATAACCTAATATTTGT 233
                                                                            *    *

consensus_9743#0      CTACTGCTGAATT-AGCCAAAC--AAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAA-- 650
consensus_9743#5      CTACTGCTGAATT-AGCCAAAC--AAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAA-- 140
consensus_9743#3      CTACTGCTGAATT-AGCCAAAC--AAGTGGTAGCTTCTCTGTCACGTCATTTTGCCAA-- 61
consensus_9743#1      TGGAGTCTGAATT-TGCAAATTTTAAATCTCAATGTAAAAGTGAAACGATTTCACCAATA 258
consensus_9743#4      TGAGATATGAATTTAAACAATTAGGTATGAAAGTATTAGACCAAAAAAATCGTGCTGA-- 83
consensus_9743#2      CACTACGTCGACAGAGGTTATTTTCAGTTATAAATTCAACACGACAGTAGGGATTTAT-- 291
                             *  *        *       *   *   *       *    *           

consensus_9743#0      --------AGGTTTATTCAAAAACA----AAGATG-CATTCAAATCGGTCGCCAAGAAAT 697
consensus_9743#5      --------AGGTTTATTCAAAAACA----AAGATG-CATTCAAATCGGTCAACTTGGGGT 187
consensus_9743#3      --------AGGTTTATTCAAAAACA----AAGATG-CATTCAAATCGGTCGCCAAGAAAT 108
consensus_9743#1      AAAAAATCAGGTTCTGCGATAGACA----AACACGGTGTTTGTGAAAGTGAAGATAGTGA 314
consensus_9743#4      ACTAGGTGGTCTGCATTTAAATATT----ACAGCAACAGT-AAATACATGGACACATACT 138
consensus_9743#2      -TTGACGTATTTTTATTTCTGTACTCCGTAGGATG-CATTCAAATCGGTCGCCAAAAAAT 349
                                 *          *      *         *        *           

consensus_9743#0      TGACTCGGAAGCTGCTCAC-ACACCATGAAGTCGACATATTCACTAAATC--AAGGTTAG 754
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      TGACTCGGAAGCTGCTCAC-ACACCATGAAGTCGACATATTCACTAAATC--AAGGTTAG 165
consensus_9743#1      TTTCATGGATTTCAGTGACGACGGAGAGGGGACAAAACATCCTACAAACTTGAAGAATAA 374
consensus_9743#4      AGGCGTAAACGACGAGAAG--TTCAACGTATTCTAATGTCTCAACAATCGGATACGATAA 196
consensus_9743#2      TGACTCGGAAGCTGCTCAC-ACACCATGAAGTCGACATATTCAGTAAAATTCTTTTATTA 408
                                                                                  

consensus_9743#0      ATCAATTGATC--GATCAATTGCTGGTACATTTCG--TAGAGACAAAAACACANATTCAA 810
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      ATCAATTGATC--GATCAATTGCTGGTACATTTCG--TAGAGACAAAAACACAAATTCAA 221
consensus_9743#1      ATCTATGAACAAAGACCAAACTTTAAACTATTTC---TGGACAAAACAAC-TACAATCTG 430
consensus_9743#4      ACAATGGGAATCCAACTAATAATGATTCTGTATCCAATGAAAAAGATCTCGTGGAATGCG 256
consensus_9743#2      TTTGAATATGTTCAGTATGTAAACAAAATATTAC---TGTATACTCTCGTATAAAGTTGT 465
                                                                                  

consensus_9743#0      GTTTCAGATGATATTGATTGGAGT----AGATTAGCTGGGATATTTTTAAGGCTCCCGTG 866
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      GTTTCAGATGATATTGATTGGAGT----AGATTAGCTGGGATATTTTTAAGGCTCCCGTG 277
consensus_9743#1      ATAGCAGAACTGAAGGAAACGGTA----AGCTAAACAAAAATGCAAATAACCAATGGGAT 486
consensus_9743#4      GTTTTAACACAAATACGGTAAGTTCTAGAAATCTTTCGAAGCGTATATATGATGATGATC 316
consensus_9743#2      CACCAGGATACAATTGAATAAGCT------GACCGTTGAAAAATGCAAACTGTCTTCCTT 519
                                                                                  

consensus_9743#0      AAGATAAGATTAAAAAGTGATTTGAAAGA---AAACCCTTC-ATTNTTTNCTCTATATGC 922
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      AAGATAAGATTAAAAAGTGATTTGAAAGA---AAACCCTTC-ATTTTTTCTTCTATATGC 333
consensus_9743#1      TCGACAGAAGTTGACCCCGATATCAAAGG---ATGTAATCG-AATCCTAGTGCAAAATAA 542
consensus_9743#4      CAGATGAAGTGAATAATTCATCAGAATCATTCACACAATCA-ACTTCAGAGACAAAACAG 375
consensus_9743#2      CAAAAATTTTAACGTATTTGTGTTAAAACCGCATTCCATGAGATCTTTTTCATTGGATAC 579
                                                                                  

consensus_9743#0      AGTAACACCTT--ATAGGGTTTACACAACATNATTATGATAGCACCAATCACTTTTAGAC 980
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      AGTAACACCTT--ATAGGTTTACCCAAACATATTATGATAAGCCCCAATCACTTTTAGAC 391
consensus_9743#1      AG-ATCGTTCT--CCAGACCTTAGTGATGATGATGACGACAATGGAAGAGAAATAAAGCG 599
consensus_9743#4      AGTAGTTCTGT--GGTGGAATTAGTAAAT------------------------------- 402
consensus_9743#2      AGAATCATTATTAGTTGGATTCCCATTGTTTATCGTATCCGATTGTTGAGACATTAGAAT 639
                                                                                  

consensus_9743#0      TAACCCACAATCATTTGGTTCGTTTAAAATTCACCC--AGCTCACCAAT---GTATCTCT 1035
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      TAACCCCAAATCATTTGGTTCGTTTAAAATTTCACCCAAGCTCACCAATTGTAATCTCTT 451
consensus_9743#1      ACATCCACAACTAGATCCAGGAATGAAAGGGAACCAAGAATTATCAAATAACGAGGTTAC 659
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ACGTTGAACTTCTCGTCGTTTACGCCTAGTATGTGTCCATGTATTTACTGTTGCTGTAAT 699
                                                                                  

consensus_9743#0      CAGTTGAGTGATATCTATNNNTCTCTGTGTACACTACAA----TACGCTTTGATCCTCTC 1091
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      CAGTTGAGTGATTATCTATTTTCTCCTTGTGTACACTAACAATTACGCTTTGTATCCCTC 511
consensus_9743#1      CAGTGACCATGTACGAATTGTAAGATCTGATGAGGTGAAA---CATGAGATCAATAACAA 716
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ATTTAAATGCAGACCACCTAGTTCAGCACGATTTTTTTGGTCTAATACTTTCATACCTAA 759
                                                                                  

consensus_9743#0      TGACTCTTTGTACATTTNCATCTGGGGAAGAATGATTTTGNCCACTTCTGGCTACAGAAT 1151
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      TCTGACTCTTTGTTACATCTTTCATCTTGTGTAAGTAATGATTTTTGTCCACTTTCTGTC 571
consensus_9743#1      TGATAATATTGACTAT-ACAAACAAGTCGGAATCATATAACACCATACCAGAAACAGGAT 775
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      TTGTTTAAATTCATATCTCAACCAATCCAAAAGAGCATCAACTGTATTTTCAGGAAGACA 819
                                                                                  

consensus_9743#0      ATNNGATCGCCATCCTTGAGTCTTCTCTATATGATGACGACGACATGTGATCTATTTTAT 1211
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      TTACGAGAATTATTGATTTCGCCCATCTTTGTAGTTCTTTTCTCTTATAAATGAATGACC 631
consensus_9743#1      CTAAACCAGAACTTCTTATTGAACCTGAAAAACGTCTAGTTTACTTTTGGGAACAAGGTA 835
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      AGATACTGAATCCGGCAGTTGCAGTGTTAATGGAGGACGTTCTAATTTACGAAGTCGGCG 879
                                                                                  

consensus_9743#0      CAAGTACCACGAGCTATGAAGCTTTGACGGATACT--TGGAAACAGAAAAGATTGA---- 1265
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      GATCGACCCATGTAGAATCATATTTTTTTAATCCA--GAGTAACCCCAGAAAGCTTATAT 689
consensus_9743#1      ATAAAACTGGCAGTCGGTCAATTCCTAGGAATACTACTGTCATTACCACTAATATCACTA 895
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      GAAATCAGATTCAGG--------------------------------------------- 894
                                                                                  

consensus_9743#0      ------------------------------------------------------------
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      GAAAGCTTCTGTACCGGATAACATTTGTAAACACAAGAAACAAAGGGCTGAATATATATA 749
consensus_9743#1      GTAATACTACTTAT---------------------------------------------- 909
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      ------------------------------------------------------------
consensus_9743#5      ------------------------------------------------------------
consensus_9743#3      TTTTTGGGAATGTTGTTTTATCACTTTTTCCCTTATCCACAAAAAAGTTCTTTCTGCAAT 809
consensus_9743#1      ------------------------------------------------------------
consensus_9743#4      ------------------------------------------------------------
consensus_9743#2      ------------------------------------------------------------
                                                                                  

consensus_9743#0      --------
consensus_9743#5      --------
consensus_9743#3      AAAAAAAT 817
consensus_9743#1      --------
consensus_9743#4      --------
consensus_9743#2      --------