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Schistosoma mansoni
cluster # 9776 cluster # 9776       Sequences # 11       consensus # 9


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9776#0 length = 711 sequences # 1  
consensus_9776#1 length = 666 sequences # 3  
consensus_9776#2 length = 561 sequences # 1  
consensus_9776#3 length = 547 sequences # 1  
consensus_9776#4 length = 496 sequences # 1  
consensus_9776#5 length = 389 sequences # 1  
consensus_9776#6 length = 355 sequences # 1  
consensus_9776#7 length = 354 sequences # 1  
consensus_9776#8 length = 176 sequences # 1  

consensusID : consensus_9776#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 711
fasta sequence
                              [GCTGTCTAAATCGGTAGTAGGAGAGATGATGCTTCGTTGATGGATGGCCGGCGTTTGACAACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAAGTGAATGAGTTGAGGGAGACTGTGGAGGCCAGGTTGGTAAAAGCAGTGTGCAGAAGTGACATGAGAACTGAAATGCCAGACCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAACGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGTAGAGGAGAGTGATGCTTCGNTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAAAGTGAAGTTGCGGATCTGAAAG]

[+] EMBL CD193168             [GCTGTCTAAATCGGTAGTAGGAGAGATGATGCTTCGTTGATGGATGGCCGGCGTTTGACAACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAAGTGAATGAGTTGAGGGAGACTGTGGAGGCCAGGTTGGTAAAAGCAGTGTGCAGAAGTGACATGAGAACTGAAATGCCAGACCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAACGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGTAGAGGAGAGTGATGCTTCGNTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAAAGTGAAGTTGCGGATCTGAAAG]


>consensus_9776#0 GCTGTCTAAATCGGTAGTAGGAGAGATGATGCTTCGTTGATGGATGGCCGGCGTTTGACA ACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAA GTGAATGAGTTGAGGGAGACTGTGGAGGCCAGGTTGGTAAAAGCAGTGTGCAGAAGTGAC ATGAGAACTGAAATGCCAGACCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTC ACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAG TCGAATTGCATGGTGGTTGACGGTTGGAACGACTACTCCTCAGAATGCATACACGACGAG CACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCG ACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCG TCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGT TCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCT TGTTATGAACAGATAGTGAAGCTGTCTAAATCGTAGAGGAGAGTGATGCTTCGNTGATGG ATGTTCGGCGTTTGTTGACTGTGAAGGAAAGTGAAGTTGCGGATCTGAAAG



consensusID : consensus_9776#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 666
fasta sequence
                              [TCTACACCCAGCGATTGAGACGCCCTATTCGGACTCGGTTTCCNTACGCCTCCCTTATGCGGTTAAGCTTGCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC----CGAAGGGCTCTGACTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCTTCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTCGTATGCTTAGTTCTTGGAATGGGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAGAGCGTTCCACTAACTCAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCGCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCTCCCGGTTCGCCTCCATACGCCTATATATTCACCGCACGATCTCCTTGCGGAGGGGTTTCCCCCTTCCGGATATCAATGGAATAAAAGCTCCATTGCCACCTTCCCCACTGTTTTTTTCAAGGCTTGGAACGTTCTTTCATCGCCTTGTGATCCCCAAAGGCATCTCACCAGATGCCCTTTATTCC]

[-] EMBL CD086427             [TCTACACCCAGCGATTGAGACGCCCTATTCGGACTCGGTTTCCNTACGCCTCCCTTATGCGGTTAAGCTTGCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCGTTTCCA  GGCTCCCACTGTTTGTATGCATCCGGTTTCAGGTTCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTCGTATGCTTAGTTCTTGGAATGGGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAGAGCGTTCCACTAACTCAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCGCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCTCCCGGTTCGCCTCCATACGCCTATAT                                                                                                                                                               ]
[+] EMBL CD087417             [                                                                                GTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC    CGAAGGGCTCTGACTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCTTCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTCGTATGCTTAGTTCTTGGAATGGGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAGAGCGTTCCACTAACTCAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCGCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTACATGTTCCAATTCTCCCGGTTCGCCTTCATACGCCTATATATTCACCGCACGATCTCCTTGCGGAGGGGTTTCCCCCTTCCGGATATCAATGGAATAAAAGCTCCATTGCCACCTTCCCCACTGTTTTTTTCAAGGCTTGGAACGTTCTTTCATCGCCTTGTGATCCCCAAAGGCATCTCACCAGATGCCCTTTATTCC]
[+] EMBL CD087426             [                                                                                GTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC    CGAAGGGCTCTGACTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCTTCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTCGTATGCTTAGTTCTTGGAATGGGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAaa                                                                                                                                                                                                                                                                                                          ]


>consensus_9776#1 TCTACACCCAGCGATTGAGACGCCCTATTCGGACTCGGTTTCCNTACGCCTCCCTTATGC GGTTAAGCTTGCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC CCGAAGGGCTCTGACTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCTTCCG GGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTA GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTC GTATGCTTAGTTCTTGGAATGGGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCAC TTTCCAGAGCGTTCCACTAACTCAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCG CCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTC TCCCGGTTCGCCTCCATACGCCTATATATTCACCGCACGATCTCCTTGCGGAGGGGTTTC CCCCTTCCGGATATCAATGGAATAAAAGCTCCATTGCCACCTTCCCCACTGTTTTTTTCA AGGCTTGGAACGTTCTTTCATCGCCTTGTGATCCCCAAAGGCATCTCACCAGATGCCCTT TATTCC



consensusID : consensus_9776#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 561
fasta sequence
                              [TGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTATGTGTGAAGATAAGTCGAATGTGGTTAGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTTGCGGATCTATGAGAACTGAAATGCCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGA]

[-] EMBL CD129060             [TGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTATGTGTGAAGATAAGTCGAATGTGGTTAGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTTGCGGATCTATGAGAACTGAAATGCCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGTTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGA]


>consensus_9776#2 TGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTATGTGTGAAGATAAGTCGAA TGTGGTTAGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTC TAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAA GGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTTGCGGATCTATGAGAACTGAAATGC CAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAG AGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGG TTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGT CGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTT GGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGT CGACCATGAGTGCAGTGGAGA



consensusID : consensus_9776#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 547
fasta sequence
                              [CAGAATCAGTCTTTTGAGTGGCTTGAATACTTAGGCAAATAAGACTGCCTGGAGGTACGTTTAAAAATGAGGTCATTTGGCTCTTTTTTTGTTGCCATGACCATACTATCTGACTGTTTATAAAGTATGAAGTATAACGTATAACATTTAATTTTGTTCCACTTACTGTGGTATGGTTGCTTGTATAGGCCCGACCGTTGCTGCTACCTTGACGTGGTGGTCGGGCTTGCCTATCGTGATGATCCAATCGAGCTATGCTGGCTGGAACAATCGTTCCTCGAGGTCCTACCATGCCAGACAGGTCGGTTGAAGAGCGGTGAGACTAAAAGCAGCAAACCCAAGGTCCGAAGGCGAAGTCGTACTGCTGACTGTACAGAGGTGTGGAAGCAGTAAGGTGTTTCCTTCAGACAACCAGCATGACAGCGATGCTGCCTTCCCACAAGGAGGGGTGGGGTTAGAAAAGGTCGACCCTAAAAATGCACACCTCGCCTTATCCCACGGATATCCGTCTCCGGCGGTAAGGTTTTTTTTTGAAGAACGGAGCTAA]

[+] EMBL CD127840             [CAGAATCAGTCTTTTGAGTGGCTTGAATACTTAGGCAAATAAGACTGCCTGGAGGTACGTTTAAAAATGAGGTCATTTGGCTCTTTTTTTGTTGCCATGACCATACTATCTGACTGTTTATAAAGTATGAAGTATAACGTATAACATTTAATTTTGTTCCACTTACTGTGGTATGGTTGCTTGTATAGGCCCGACCGTTGCTGCTACCTTGACGTGGTGGTCGGGCTTGCCTATCGTGATGATCCAATCGAGCTATGCTGGCTGGAACAATCGTTCCTCGAGGTCCTACCATGCCAGACAGGTCGGTTGAAGAGCGGTGAGACTAAAAGCAGCAAACCCAAGGTCCGAAGGCGAAGTCGTACTGCTGACTGTACAGAGGTGTGGAAGCAGTAAGGTGTTTCCTTCAGACAACCAGCATGACAGCGATGCTGCCTTCCCACAAGGAGGGGTGGGGTTAGAAAAGGTCGACCCTAAAAATGCACACCTCGCCTTATCCCACGGATATCCGTCTCCGGCGGTAAGGTTTTTTTTTGAAGAACGGAGCTAA]


>consensus_9776#3 CAGAATCAGTCTTTTGAGTGGCTTGAATACTTAGGCAAATAAGACTGCCTGGAGGTACGT TTAAAAATGAGGTCATTTGGCTCTTTTTTTGTTGCCATGACCATACTATCTGACTGTTTA TAAAGTATGAAGTATAACGTATAACATTTAATTTTGTTCCACTTACTGTGGTATGGTTGC TTGTATAGGCCCGACCGTTGCTGCTACCTTGACGTGGTGGTCGGGCTTGCCTATCGTGAT GATCCAATCGAGCTATGCTGGCTGGAACAATCGTTCCTCGAGGTCCTACCATGCCAGACA GGTCGGTTGAAGAGCGGTGAGACTAAAAGCAGCAAACCCAAGGTCCGAAGGCGAAGTCGT ACTGCTGACTGTACAGAGGTGTGGAAGCAGTAAGGTGTTTCCTTCAGACAACCAGCATGA CAGCGATGCTGCCTTCCCACAAGGAGGGGTGGGGTTAGAAAAGGTCGACCCTAAAAATGC ACACCTCGCCTTATCCCACGGATATCCGTCTCCGGCGGTAAGGTTTTTTTTTGAAGAACG GAGCTAA



consensusID : consensus_9776#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence
                              [NGCCGCCATGGCTGGCCGCGGGAAATTCGATTACTGCGACACGGCTTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTCACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTACCGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGTCACCGGCCTCTTTCCTTATCTTCTTGACAACTGGCTCGTCATTACCGTTCTTAGCTTCATGATCTGCAACATCTTTGGCATCCACAGACTTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGTGTGCAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCCAGTTGTCAAGAAGATAAGGAAA]

[+] EMBL CD130705             [NGCCGCCATGGCTGGCCGCGGGAAATTCGATTACTGCGACACGGCTTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTCACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTACCGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGTCACCGGCCTCTTTCCTTATCTTCTTGACAACTGGCTCGTCATTACCGTTCTTAGCTTCATGATCTGCAACATCTTTGGCATCCACAGACTTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGTGTGCAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCCAGTTGTCAAGAAGATAAGGAAA]


>consensus_9776#4 NGCCGCCATGGCTGGCCGCGGGAAATTCGATTACTGCGACACGGCTTCTTCGTTCGACTC CTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTT TTCATTCTGATGTTCACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCC ATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTACCGTCTTCATCCAACTCAGC CACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGTCACCGGCCTC TTTCCTTATCTTCTTGACAACTGGCTCGTCATTACCGTTCTTAGCTTCATGATCTGCAAC ATCTTTGGCATCCACAGACTTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGAC CTCATCTTTGTGTGCAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCCAGTTGT CAAGAAGATAAGGAAA



consensusID : consensus_9776#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence
                              [GAACCCTGATGACAATGCTACATCATGTTCAATGATACGATCTGGCATTTCAGTTCTCATGTCACTTCTGCACACTGCTTTTACCAACCTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAAG]

[-] EMBL CD161517             [GAACCCTGATGACAATGCTACATCATGTTCAATGATACGATCTGGCATTTCAGTTCTCATGTCACTTCTGCACACTGCTTTTACCAACCTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAAG]


>consensus_9776#5 GAACCCTGATGACAATGCTACATCATGTTCAATGATACGATCTGGCATTTCAGTTCTCAT GTCACTTCTGCACACTGCTTTTACCAACCTGGCTACTGACACATTGTCAACTTCAGGATT TACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAA GCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGA GTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGAGTGATGC TTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAG AGAAGAGAAGTGTCATTTGCGAGACGAAG



consensusID : consensus_9776#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 355
fasta sequence
                              [CGTATGCTCAGTTCTTGGAATGCGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAGAGCGTTCCACTAACACAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCGCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCTCCCGGTTCGCCTCCACTGGCCTATGTGTTCAGCCAGGGATCTCCTTGCGGAGGGGTTTCCCCATTCGGACATCAGCGGATCAAAGCTCCATTGCCAGCTCCCCGCTGCTTTTCGCAGGCTTGCACGTCCTTCATCGCCTGTGATCGCCAAGGCATCCACCAGATGCACTTAGT]

[+] EMBL CD124538             [CGTATGCTCAGTTCTTGGAATGCGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCCAGAGCGTTCCACTAACACAATCCATAACACATACAGGCTCTTCCGCGTTCGCTCGCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCTCCCGGTTCGCCTCCACTGGCCTATGTGTTCAGCCAGGGATCTCCTTGCGGAGGGGTTTCCCCATTCGGACATCAGCGGATCAAAGCTCCATTGCCAGCTCCCCGCTGCTTTTCGCAGGCTTGCACGTCCTTCATCGCCTGTGATCGCCAAGGCATCCACCAGATGCACTTAGT]


>consensus_9776#6 CGTATGCTCAGTTCTTGGAATGCGTTTTCGTGTACGGGGCTATCACCCACTATGGCCGCA CTTTCCAGAGCGTTCCACTAACACAATCCATAACACATACAGGCTCTTCCGCGTTCGCTC GCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTT CTCCCGGTTCGCCTCCACTGGCCTATGTGTTCAGCCAGGGATCTCCTTGCGGAGGGGTTT CCCCATTCGGACATCAGCGGATCAAAGCTCCATTGCCAGCTCCCCGCTGCTTTTCGCAGG CTTGCACGTCCTTCATCGCCTGTGATCGCCAAGGCATCCACCAGATGCACTTAGT



consensusID : consensus_9776#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence
                              [CGGTCCACGACTCTCCACGTACATCGCCGACACCTCTTCCTTCCTCTCCAACACATCCACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTAGTCGACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAGGCTGTCTAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGCGTCATTTGCGAGACGAAGTGAATGA]

[+] EMBL CD112655             [CGGTCCACGACTCTCCACGTACATCGCCGACACCTCTTCCTTCCTCTCCAACACATCCACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTAGTCGACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAGGCTGTCTAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGCGTCATTTGCGAGACGAAGTGAATGA]


>consensus_9776#7 CGGTCCACGACTCTCCACGTACATCGCCGACACCTCTTCCTTCCTCTCCAACACATCCAC ATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGT GGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGT TAGTCGACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAGGCTGTCTAAATC GGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAG TGAAGTTGCGGATCTGAGAGAAGAGAAGCGTCATTTGCGAGACGAAGTGAATGA



consensusID : consensus_9776#8
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 176
fasta sequence
                              [TACTCTTCCGATATATTCGTGCATCAAACAGCATTTTCCCAGAGATTATTTCTCGAAATTGCTGTTTGATGCACGAATATATCGGAAGAGGTATCAGACCGAGTAATGAAGCCATAACCAGCCTTGACGTTAAACCACTTGACTACTCCTCTAAGCCTATCTTCAGTCATTCCACG]

[+] EMBL CD111697             [TACTCTTCCGATATATTCGTGCATCAAACAGCATTTTCCCAGAGATTATTTCTCGAAATTGCTGTTTGATGCACGAATATATCGGAAGAGGTATCAGACCGAGTAATGAAGCCATAACCAGCCTTGACGTTAAACCACTTGACTACTCCTCTAAGCCTATCTTCAGTCATTCCACG]


>consensus_9776#8 TACTCTTCCGATATATTCGTGCATCAAACAGCATTTTCCCAGAGATTATTTCTCGAAATT GCTGTTTGATGCACGAATATATCGGAAGAGGTATCAGACCGAGTAATGAAGCCATAACCA GCCTTGACGTTAAACCACTTGACTACTCCTCTAAGCCTATCTTCAGTCATTCCACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9776#0      -----------------------------GCTGTCTAAATCGGTAGTAGGAGAGATGATG 31
consensus_9776#2      TGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTATGTGTGAAGATAAGTCGAA 60
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      ------------------------------------------------------------
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ------------------------------------------------------------
consensus_9776#3      ------------------------------------------------------------
                                                                                  

consensus_9776#0      CTTCGTTGATGGATGGCCGGCGT--TTGACAACT----GTGAA-GGAGAGTGAAGTTGC- 83
consensus_9776#2      TGTGGTTAGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTC 120
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      ----------------------------------------------TCTACACCCAGCGA 14
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ------------------------------------------------------------
consensus_9776#3      ------------------------------------------------------------
                                                                                  

consensus_9776#0      -GGATC---TGAGAGAAGAGAAGTGTCATTTGCGAGA---CGAAGTGAATGAGTTGAGGG 136
consensus_9776#2      TAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTGACTGTGAA 180
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      TTGAGACGCCCTATTCGGACTCGGTTTCCNTACGCCTCCCTTATGCGGTTAAGCTTGCCA 74
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ------------------------------------------------------------
consensus_9776#3      ------------------------------------------------------------
                                                                                  

consensus_9776#0      AGACTGTGGAGGCCAGGTTGGTAAAAGCAGTGTGCAGAAGTGACATGAGAACTGAAATGC 196
consensus_9776#2      GGAGAGTGAAGTTGCGGATCTGAGAGAAGAGAAGTTGCGGATCTATGAGAACTGAAATGC 240
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      CTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCCGAAGGGCTCTGA 134
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ------------------------------------------------------------
consensus_9776#3      ------------------------------------------------------------
                                                                                  

consensus_9776#0      CAGACCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAG 256
consensus_9776#2      CAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAG 300
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      CTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCTTCCGGGGTACTTTTCACC 194
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ------------------------------------------------------------
consensus_9776#3      -----------------------CAGAATCAGTCTTTTGAGTGGCTTGAATACTTAGGCA 37
                                                                                  

consensus_9776#0      AGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGG 316
consensus_9776#2      AGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGG 360
consensus_9776#5      ------------------------------------------------------------
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      TTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTGGAGGATGG 254
consensus_9776#6      ------------------------------------------------------------
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ----NGCCGCCATGGCTGGCCGCGGGAAATTCGATTACTGCGACACGGCTTCTTCGTTCG 56
consensus_9776#3      AATAAGACTGCCTGGAGGTACGTTTAAAAATGAGGTCATTTGGCTCTTTTTTTGTTGCCA 97
                                                                                  

consensus_9776#0      TTGACGGTTGGAACGACTACTCCTCAGAATGCATACACGACG-AGCACAA--------GC 367
consensus_9776#2      TTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACG-AGCACAA--------GC 411
consensus_9776#5      ----------------------------------GAACCCTG-ATGACAA--------TG 17
consensus_9776#7      ------------------------------------------------------------
consensus_9776#1      TCCCCCCATATTCAGACAGGATTTCGCGTGTCCCGCCCTACTTGTCGTAT--------GC 306
consensus_9776#6      ---------------------------------------------CGTAT--------GC 7
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGAC--------CC 108
consensus_9776#3      TGACCATACTATCTGACTGTTTATAAAGTATGAAGTATAACGTATAACATTTAATTTTGT 157
                                                                                  

consensus_9776#0      CTAGTGTGTCGGTTGGTTCT-CCGAC--CAGACTTGTGAGTGTGGAGACTCAAGCGACAG 424
consensus_9776#2      CTAGTGTGTCGGTTGGTTCT-CCGAC--CAGACTTGTGAGTGTGGAGACTCAAGCGACAG 468
consensus_9776#5      CTA-CATCATGTTCAATGAT-ACGAT--CTGGCATTTCAGTTCTCATGTCACTTCTGCAC 73
consensus_9776#7      -----------------------------CGGTCCACGACTCTCCACGTACATCGCCGAC 31
consensus_9776#1      TTAGTTCTTGGAATGGGTTT-TCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCC 365
consensus_9776#6      TCAGTTCTTGGAATGCGTTT-TCGTGTACGGGGCTATCACCCACTATGGCCGCACTTTCC 66
consensus_9776#8      ---------------------------------TACTCTTCCGATATATTCGTGCATCAA 27
consensus_9776#4      ATCGTCTGATTTTTCATTCTGATGTTCACCGACATGTTCGCCGTTACTGCCGTTTACATG 168
consensus_9776#3      TCCACTTACTGTGGTATGGTTGCTTGTATAGGCCCGACCGTTGCTGCTACCTTGACGTGG 217
                                                                                  

consensus_9776#0      ACAGC--GTGTC-TTGG-TTGGCTACTGACACAT----TGTCAACTTCAGGATT-TACCT 475
consensus_9776#2      ACAGC--GTGTC-TTGG-TTGGCTACTGACACAT----TGTCAACTTCAGGATT-TACCT 519
consensus_9776#5      ACTGC--TTTTA-CCAACCTGGCTACTGACACAT----TGTCAACTTCAGGATT-TACCT 125
consensus_9776#7      ACCTC--TTCCT-TCCTCTCCAACACATCCACAT----TGTCAACTTCAGGATT-TACCT 83
consensus_9776#1      AGAGC--GTTCCACTAACTCAATCCATAACACATA---CAGGCTCTTCCGCGTT-CGCTC 419
consensus_9776#6      AGAGC--GTTCCACTAACACAATCCATAACACATA---CAGGCTCTTCCGCGTT-CGCTC 120
consensus_9776#8      ACAGC--ATTTTCCCAG---AGATTATTTCTCGAA---ATTGCTGTTTGATGCA-CGAAT 78
consensus_9776#4      TTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTACCGTCTTC 228
consensus_9776#3      TGGTCGGGCTTGCCTATCGTGATGATCCAATCGAGCTATGCTGGCTGGAACAAT-CGTTC 276
                          *                                        *              

consensus_9776#0      ATC--CGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCT 533
consensus_9776#2      ATC--CGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGA---------------- 561
consensus_9776#5      ATC--CGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCT 183
consensus_9776#7      ATC--CGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCT 141
consensus_9776#1      GCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTT 479
consensus_9776#6      GCCACTACTTACGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTT 180
consensus_9776#8      ATA-TCGGAAGAGGTATCAGACCGAGTAATGAAGCCATAACCAGCCTTGACGTTAAACCA 137
consensus_9776#4      ATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGT 288
consensus_9776#3      CTCGAGGTCCTACCATGCCAGACAGGTCGGTTGAAGAGCGGTGAGACTAAAAGCAGCAAA 336
                                                                                  

consensus_9776#0      AGTG-AGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGT 592
consensus_9776#2      ------------------------------------------------------------
consensus_9776#5      AGTG-AGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGT 242
consensus_9776#7      AGTG-AGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTAGTCGACTGCGTGAAGAGT 200
consensus_9776#1      CTCCCGGTTCGCCTCCATACGCCTATATATTCACCGCAC--GATCTCCTTGCGGAGGGGT 537
consensus_9776#6      CTCCCGGTTCGCCTCCACTGGCCTATGTGTTCAGCCAGG--GATCTCCTTGCGGAGGGGT 238
consensus_9776#8      CTTG-ACTACTCCTCTAAGCCTATCTTCAGTCATTCCACG-------------------- 176
consensus_9776#4      GTCACCGGCCTCTTTCCTTATCTTCTTGACAACTGGCTCGTCATTACCGTTCTTAGCTTC 348
consensus_9776#3      CCCAAGGTCCGAAGGCGAAGTCGTACT-GCTGACTGTACAGAGGTGTGGAAGCAGTAAGG 395
                                                                                  

consensus_9776#0      TGGCGTCTT---GTTATGAACAGA-TAGTGAAGCTG--TCTAAATCG-TAGAGGAGAGTG 645
consensus_9776#2      ------------------------------------------------------------
consensus_9776#5      TGGCGTCTT---GTTATGAACAGA-TAGTGAAGCTG--TCTAAATCGGTAGAGGAGAGTG 296
consensus_9776#7      TGGCGTCTT---GTTATGAACAGA-TAGTGAGGCTG--TCTAAATCGGTTGAGGAGAGTG 254
consensus_9776#1      TTCCCCCTTCCGGATATCAATGGAATAAAAGCTCCA--TTGCCACCTTCCCCACTGTTTT 595
consensus_9776#6      TTCCCCATTC-GGACATCAGCGGA-TCAAAGCTCCA--TTGCCAGCT-CCCCGCTGCTTT 293
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      ATGATCTGCAACATCTTTGGCATCCACAGACTTCCT--TTTCAACTCTTCAATTTTCGAC 406
consensus_9776#3      TGTTTCCTTCAGACAACCAGCATGACAGCGATGCTGCCTTCCCACAAGGAGGGGTGGGGT 455
                                                                                  

consensus_9776#0      ATGCTTCGNT---GATGGATGTTCGGCGTTTGTTGACTGTGAAGGAAAGTGAAGTTGCGG 702
consensus_9776#2      ------------------------------------------------------------
consensus_9776#5      ATGCTTCGTT---GATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGG 353
consensus_9776#7      ATGCTTCGTT---GATGGATGTTCGGCGTTTGTTGACTGTGAAGGAGAGTGAAGTTGCGG 311
consensus_9776#1      TTTCAAGGCTTGGAACGTTCTTTCATCGCCTTGTGATCCCCAAAGGCATCTCACCAGATG 655
consensus_9776#6      TCGCA-GGCTTGCA-CGTCCTT-CATCGCCT-GTGATCGCCAA-GGCATC-CACCAGATG 347
consensus_9776#8      ------------------------------------------------------------
consensus_9776#4      TCAACGTGAGTGACCTCATCTTTGTGTGCAGCGACAGACTCCATCTGAGACAGGTTATTG 466
consensus_9776#3      TAGAAAAGGTCGACCCTAAAAATGCACACCTCGCCTTATCCCACGGATATCCGTCTCCGG 515
                                                                                  

consensus_9776#0      ATCTGAAAG---------------------------------- 711
consensus_9776#2      -------------------------------------------
consensus_9776#5      ATCTGAGAGAAGAGAAGTGTCATTTGCGAGACGAAG------- 389
consensus_9776#7      ATCTGAGAGAAGAGAAGCGTCATTTGCGAGACGAAGTGAATGA 354
consensus_9776#1      CCCTTTATTCC-------------------------------- 666
consensus_9776#6      CACTTAGT----------------------------------- 355
consensus_9776#8      -------------------------------------------
consensus_9776#4      GGCGTGCCAGTTGTCAAGAAGATAAGGAAA------------- 496
consensus_9776#3      CGGTAAGGTTTTTTTTTGAAGAACGGAGCTAA----------- 547
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)