These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9809#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1061 fasta sequence [CGCATGTTTTCTGAGCCTGGATTCACTAACATTATATTTTCTGGTTTCAAATCAGCATGGATTAAACCAGGAGTCTTTAATTTTGAAAGAGCCGTGAGGACCTGCTGAGAAATGGGGCGGATCTCCGGAAGCGTCAATGGACGAAACTTATTTGACTTGAGATACTCATATAAGTTTTGGTCCAATAACTCAAATACGAAACACATGTGGTTTCTATGTTGAAAGCACTCAATCGCCCTGACAATATTATGAGACTCTGTGTCCTGTTGAGCCAGTGTTTGCAAAATTTGAATCTCTATATTACCTTGCCTTAGGTAAGAAGGTAAGTTCTTTAATATCTTGATGGCTACATAGCGGCTCGTTGATCGACAGCGGCACTTGACAACCTGGCCGAAAGTCCCTCGCCCGAGAAATGAGAGAACTTCGTATGCCTCGCTGCCAGAATTAAGCATCTCCCCAACAACTATGGCATAGTCACCCTCAGTTGTAGTTAGCTTTGAGTTCGCCTTTGTGGTTGCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCCACTGTGTGTCCCAAGGTC] [-] EMBL CD187861 [CGCATGTTTTCTGAGCCTGGATTCACTAACATTATATTTTCTGGTTTCAAATCAGCATGGATTAAACCAGGAGTCTTTAATTTTGAAAGAGCCGTGAGGACCTGCTGAGAAATGGGGCGGATCTCCGGAAGCGTCAATGGACGAAACTTATTTGACTTGAGATACTCATATAAGTTTTGGTCCAATAACTCAAATACGAAACACATGTGGTTTCTATGTTGAAAGCACTCAATCGCCCTGACAATATTATGAGACTCTGTGTCCTGTTGAGCCAGTGTTTGCAAAATTTGAATCTCTATATTACCTTGCCTTAGGTAAGAAGGTAAGTTCTTTAATATCTTGATGGCTACATAGCGGCTCGTTGATCGACAGCGGCACTTGACAACCTGGCCGAAAGTCCCTCGCCCGAGAAATGAGAGAACTTCGTATGCCTCGCTGCCAGAATTAAGCATCTCCCCAACAACTATGGCATAGTCACCCTCAGTTGTAGTTAGCTTTGAGTTCG CTTTGTGa ] [+] EMBL CD121013 [ AATCTCTATATTACCTTGCCTTAGGTAAGAAGGTAAGTTCTTTAATATCTTGATGGCTACATAGCGGCTCGTTGATCGACAGCGGCACTTGACAACCTGGCCGAAAGTCCCTCGCCCGAGAAATGAGAGAACTTCGTATGCCTCGCTGCCAGAATTAAGCATCTCCCCAACAACTATGGCATAGTCACCCTCAGTTGTAGTTAGCTTTGAGTTCGCCTTTGTGGTTGCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCC ] [-] EMBL CD061901 [ CTTGCCTTAGGTAAGAAGGTAAGTTCTTTAATATCTTGATGGCTACATAGCGGCTCGTTGATCGACAGCGGCACTTGACAACCTGGCCGAAAGTCCCTCGCCCGAGAAATGAGAGAACTTCGTATGCCTCGCTGCCAGAATTAAGCATCTCCCCAACAACTATGGCATAGTCACCCTCAGTTGTAGTTAGCTTTGAGTTCGCCTTTGTGGTTGCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCC ] [-] EMBL CD153003 [ AGCATCTCCNCAACANCTATGGCATAGTCACCCTCAGTTGTAGTTAGCTTTGAGTTCGCCTTTGTGGTTGCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACGAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATC ] [-] EMBL CD120910 [ TCAGTGGTAGTTAGCTTTGAGTTCGCCTTTGTGGTGNCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGGATATTAACAAACTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCC ] [-] EMBL CD120959 [ TAGCTNTGAGTTCGCCTNTGTGGTGNCAGCCGGCAGCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCC ] [+] EMBL CD161294 [ GCGTATTCATACCAGTGAACTGTATAGCGCTACTTGAGCAGATGTCAGTTATTGGGGCGTTTATTGCAGAGACATTAGATGTGTTGTAAGTACATGCCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATAC ] [-] EMBL CD153347 [ CCTGATGCTGTAAAAACGAGCCAACATGAGCTCCCAAATGACCATGTAAATGACCACTAGGAGAAGAAGGAACATGCAAACGGTGTAACCTTGGAGCAGACGAGCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAGTCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACC ] [+] EMBL CD147997 [ GCCATCGTGAATCTGCAAATTAGCGTCATCCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGACCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCC ] [+] EMBL CD152165 [ CCGCTTTCCTCTTTTTATGAACAATATGGATTCCATTCCTAGCAGGATACAAACCATTCTCATCTTTTGACCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCCACTGTGTGTCCCAAGGTC] [-] EMBL CD148055 [ ATCGATCATACTGTTTCTGAATATTAACAAGCTCCGAATATCTGGGAAACCCCGAATATTTAGCAAACTTTAACTTGTTCTCTTTGAAGACATGTCCTTCCGTATAAACACTCTGCAAATCCATTTATAACTGATTATAAACGAGAAATAGATGCATTCTAGACATTAACAATCAGGAAGAACGGTCGATCAAACAAAACCAGCAGCGAAGATACCCGCCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||