cluster # 9826

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Schistosoma mansoni
cluster # 9826 cluster # 9826 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9826#0 length = 1043 sequences # 5
consensus_9826#1 length = 677 sequences # 1
consensus_9826#2 length = 607 sequences # 1

consensus_9826#3 length = 531 sequences # 2
consensus_9826#4 length = 488 sequences # 1
consensus_9826#5 length = 420 sequences # 1

consensusID : consensus_9826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1043
fasta sequence

                              [TGGATTACATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGCTGTTATTTTTGTTAGCATGCATCTGGCACTTTTGTTCAGTTTATATCGCTAAATGTCTTCTGAAACAACGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATAAAAATTACGATTCATCAAATAATTTAACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCATAAAAGAACTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTCACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGTTAATGCTAGCCCAAACACACCAAACAACAGTGTAGTAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT]

[+] EMBL CD078960             [TGGATTACATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGCTGTTATTTTTGTTAGCATGCATCTGGCACTTTTGTTCAGTTTATATCGCTAAATGTCTTCTGAAACAACGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATAAAAATTACGATTCATCAAATAATTTAACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCATAAAAGAACTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTCACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATAATGTATGCCAAGCAGCTGAGTTGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD201578             [                           CGGTCAGTATTACATGTTTTCTTATGCCGTGGC GTTATTTTTGTTAGCATGCAACTGGCACTTTTGTTCTGTTTATAT GCTAAAT TCGTCTGAAACAA GTTCGCCAAATACAACAAACAACAAGACTCCGTTATTAAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATAAAAATTACGATTCAGCAAATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD084039             [                                                                                                                                                                                                                                                                                                                                                                                 gGGATTTTATTAAAAAGTTTGAAGCT ATTCACACTTACGTAAAGATACTCACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGTTAATGCTAGCCCAAACACACCAAACAACAGTGTAGTAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTC                                                                                                                                                                                                                                                              ]
[-] EMBL CD074833             [                                                                                                                                                                                                                                                                                                                                                                                                                                ACTCACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGTTAATGCTAGCCCAAACACACCAAACAACAGTGTAGTAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT]
[-] EMBL CD073414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAAACACACCAAACAACAGTGTAGTAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCCACATGAAGAGCCGAATTCTGAGCATATGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATATTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTACACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT]




>consensus_9826#0
TGGATTACATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGC
TGTTATTTTTGTTAGCATGCATCTGGCACTTTTGTTCAGTTTATATCGCTAAATGTCTTC
TGAAACAACGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAG
CTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACT
TGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATAAAAATTACGATTCATCAAATA
ATTTAACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCATAAA
AGAACTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTC
ACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGT
TGGACAGTAAACCTGTTTTACCTGTTAATGCTAGCCCAAACACACCAAACAACAGTGTAG
TAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACTGGAGCTTTAATATATCAGAACG
ATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTG
AGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGA
ATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCAT
CTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTG
TCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATT
GATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCA
GAATTCCAGGTTTCTATACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATG
TTTATTGTTATTGTAATAAATAT

consensusID : consensus_9826#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence

                              [CCCTCGAGCCAAAAATTCGGCACGAGGCTTAATTCCTCCCGTGATATCAGTGTACGTAGTATTAAGATAATCGAACATACATTTCTAAAGCTCACTTATCGGGTTTTATTCCAAAGTCCTACATGTGTTATAATGACATTAAACTTGTTATGACCCGGAGTATCCTAGATCTGATACTAATACATAAGGTGCTACGCGCTACCTCTCTCCCAACTGACTACTTAAGCAAGAAAACAGGAATGGATGAGAACGTCTACTGGGCTACCAAATAATATATATATATATATATATATATATATGCATTTCTACCCTTTAGAAGATCAATCTATTTCTTAGCCAATGATATGCATTTATCCTTCGGGACATTTCTGATTGTCATCAAATGACCTCATTTCGTTACTTCTGATTGGCTCACTGTATCACCACTTACCCTTTGAGTAAGTTCCACAAATAAGAATGAACCAGAACTCATAAAGTATTCATAGTTGTTTACTTACACAAACCACAATGACTTGTTTCAATTCACTGTTAAATTTACAATACGTCATGTAATAAAGAAGTATATTAATATTGCTTTCCTTTTAGAATCACTTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACANAAGTCAAGTTTAATTGATCTAGAGAATCATTCT]

[+] EMBL CD081914             [CCCTCGAGCCAAAAATTCGGCACGAGGCTTAATTCCTCCCGTGATATCAGTGTACGTAGTATTAAGATAATCGAACATACATTTCTAAAGCTCACTTATCGGGTTTTATTCCAAAGTCCTACATGTGTTATAATGACATTAAACTTGTTATGACCCGGAGTATCCTAGATCTGATACTAATACATAAGGTGCTACGCGCTACCTCTCTCCCAACTGACTACTTAAGCAAGAAAACAGGAATGGATGAGAACGTCTACTGGGCTACCAAATAATATATATATATATATATATATATATATGCATTTCTACCCTTTAGAAGATCAATCTATTTCTTAGCCAATGATATGCATTTATCCTTCGGGACATTTCTGATTGTCATCAAATGACCTCATTTCGTTACTTCTGATTGGCTCACTGTATCACCACTTACCCTTTGAGTAAGTTCCACAAATAAGAATGAACCAGAACTCATAAAGTATTCATAGTTGTTTACTTACACAAACCACAATGACTTGTTTCAATTCACTGTTAAATTTACAATACGTCATGTAATAAAGAAGTATATTAATATTGCTTTCCTTTTAGAATCACTTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACANAAGTCAAGTTTAATTGATCTAGAGAATCATTCT]




>consensus_9826#1
CCCTCGAGCCAAAAATTCGGCACGAGGCTTAATTCCTCCCGTGATATCAGTGTACGTAGT
ATTAAGATAATCGAACATACATTTCTAAAGCTCACTTATCGGGTTTTATTCCAAAGTCCT
ACATGTGTTATAATGACATTAAACTTGTTATGACCCGGAGTATCCTAGATCTGATACTAA
TACATAAGGTGCTACGCGCTACCTCTCTCCCAACTGACTACTTAAGCAAGAAAACAGGAA
TGGATGAGAACGTCTACTGGGCTACCAAATAATATATATATATATATATATATATATATG
CATTTCTACCCTTTAGAAGATCAATCTATTTCTTAGCCAATGATATGCATTTATCCTTCG
GGACATTTCTGATTGTCATCAAATGACCTCATTTCGTTACTTCTGATTGGCTCACTGTAT
CACCACTTACCCTTTGAGTAAGTTCCACAAATAAGAATGAACCAGAACTCATAAAGTATT
CATAGTTGTTTACTTACACAAACCACAATGACTTGTTTCAATTCACTGTTAAATTTACAA
TACGTCATGTAATAAAGAAGTATATTAATATTGCTTTCCTTTTAGAATCACTTGATCAAG
AACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACANAAGTCAAGTTTAATTG
ATCTAGAGAATCATTCT

consensusID : consensus_9826#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence

                              [TTTTCGGTCCGAGGCGGAAACCGAACTGGATTACTCACGAAGTCCTGATTGGTATCTTCTCAAAATTAAACTTGGATATTTTGAATCCCGACAAAGTAATGATCAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAAATACTCTTCTGGAAAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTTGCCTTGGGTCAGTTCTACCAACTGAGCTCATTCGAGAGCTACGAGGTTCTTCACATTGTGAGATTCCATATCTCGCTTTACGGTTACGATTTCTTTCTTTATTAATTAGTCAGTCTCAGACTCTTCCAGTTGACTTGCACAAATCACTTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACAAAAGTCAAGTTTAATTGATCTAGAGAATCATTCTCCTGGTAATCAAATCCTAGTCACGGAT]

[+] EMBL CD083275             [TTTTCGGTCCGAGGCGGAAACCGAACTGGATTACTCACGAAGTCCTGATTGGTATCTTCTCAAAATTAAACTTGGATATTTTGAATCCCGACAAAGTAATGATCAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAAATACTCTTCTGGAAAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTTGCCTTGGGTCAGTTCTACCAACTGAGCTCATTCGAGAGCTACGAGGTTCTTCACATTGTGAGATTCCATATCTCGCTTTACGGTTACGATTTCTTTCTTTATTAATTAGTCAGTCTCAGACTCTTCCAGTTGACTTGCACAAATCACTTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACAAAAGTCAAGTTTAATTGATCTAGAGAATCATTCTCCTGGTAATCAAATCCTAGTCACGGAT]




>consensus_9826#2
TTTTCGGTCCGAGGCGGAAACCGAACTGGATTACTCACGAAGTCCTGATTGGTATCTTCT
CAAAATTAAACTTGGATATTTTGAATCCCGACAAAGTAATGATCAAGAATGTAACTGGGG
GTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAAATACTCTTCTGGA
AAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAATTTCTACCACTGCT
CTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTTCCAAGCTCCTTAG
ATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTTGCCTTGGGTCAGT
TCTACCAACTGAGCTCATTCGAGAGCTACGAGGTTCTTCACATTGTGAGATTCCATATCT
CGCTTTACGGTTACGATTTCTTTCTTTATTAATTAGTCAGTCTCAGACTCTTCCAGTTGA
CTTGCACAAATCACTTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTC
AAAACAAAAGTCAAGTTTAATTGATCTAGAGAATCATTCTCCTGGTAATCAAATCCTAGT
CACGGAT

consensusID : consensus_9826#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 531
fasta sequence

                              [GCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT]

[-] EMBL CD076846             [GCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAATAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT]
[+] EMBL AA960691             [                                                                                                                       GAGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCACATCAACAAATAAAGTCGGTTGT                                                                                                                                                                                                          ]




>consensus_9826#3
GCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCAC
TATACTGGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGG
AGGATGCGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAAC
CTCATATGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATG
GAAATACTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATG
GCTGCACATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTT
ATTAATTGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTT
CTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAA
TAATACTATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT

consensusID : consensus_9826#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence

                              [TGGATTAGATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGCGTTATTTTTGTTAGCATGCAACTGGCACTTTTGTTCAGTTTATATGCTAAATTCGTCTGAAACAAGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATNNNNNNNNNNNNNNAGCAAATAATTTAACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCAGAAAAGAACTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTCCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGGTAATGCTAGCCCA]

[+] EMBL CD081007             [TGGATTAGATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGCGTTATTTTTGTTAGCATGCAACTGGCACTTTTGTTCAGTTTATATGCTAAATTCGTCTGAAACAAGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGATCCAATCTTCATGGTTACGTTTTTACCAAGCGATNNNNNNNNNNNNNNAGCAAATAATTTAACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCAGAAAAGAACTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTCCTCTGGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGGTAATGCTAGCCCA]




>consensus_9826#4
TGGATTAGATCCGTTTGAACAGAATGACGGTCAGTATTACATGTTTTCTTATGCCGTGGC
GTTATTTTTGTTAGCATGCAACTGGCACTTTTGTTCAGTTTATATGCTAAATTCGTCTGA
AACAAGTTCGCCAAATACAACAGACAACAAGACACCGTTATTAAAAGCGTTACTAGCTAA
ACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTTGGA
TCCAATCTTCATGGTTACGTTTTTACCAAGCGATNNNNNNNNNNNNNNAGCAAATAATTT
AACACAGTGGGCTAGCTTTGCTCGATTTGATGCTACTTGGACGAGTTCCTCAGAAAAGAA
CTTAGAGGATTTTATTAAAAAGTTTGAAGCTAATTCACACTTACGTAAAGATACTCCTCT
GGACTCATAATGTAGGCCAAGCAGCTGAGTTGGACAGTAAACCTGTTTTACCTGGTAATG
CTAGCCCA

consensusID : consensus_9826#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 420
fasta sequence

                              [AAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTACCTCAGATACAGTGGAAACCGAACTGGATTACTCACGAAGTCCTGATTGGTATCTTCTCAAAATTAAACTTGGATATTTTGAATCTCGACAAAGTAATGATCAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAAATACTCTGCTGGAAAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTT]

[+] EMBL CD138748             [AAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGACATTTAATCGTCACTACCTCAGATACAGTGGAAACCGAACTGGATTACTCACGAAGTCCTGATTGGTATCTTCTCAAAATTAAACTTGGATATTTTGAATCTCGACAAAGTAATGATCAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAAATACTCTGCTGGAAAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTT]




>consensus_9826#5
AAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATTATTCAGAC
ATTTAATCGTCACTACCTCAGATACAGTGGAAACCGAACTGGATTACTCACGAAGTCCTG
ATTGGTATCTTCTCAAAATTAAACTTGGATATTTTGAATCTCGACAAAGTAATGATCAAG
AATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGACTAAATGAGCTAA
ATACTCTGCTGGAAAAAGCTGATCCCAAGTTAGTCGTTTGTTATCTGCATTCGGTAAAAT
TTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCGAAACCATGAATAAAATACGTT
CCAAGCTCCTTAGATCTGTCGGTATTTTGTGTTCTCTAGATTCCGCTTGTATTCGTGTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9826#0      ------------------TGGATTACATCCGTTTGAACAGAATGACGGTCAGTATTACAT 42
consensus_9826#4      ------------------TGGATTAGATCCGTTTGAACAGAATGACGGTCAGTATTACAT 42
consensus_9826#3      ---------------------GCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATT 39
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      --------AAAAGCGTTACTAGCTAAACCTGTCTCATCACGTTTATTCCTTGAAATAATT 52
consensus_9826#1      CCCTCGAGCCAAAAATTCGGCACGAGGCTTAATTCCTCCCGTGATATCAGTGTACGTAGT 60
                                                                                  

consensus_9826#0      GTTTTCTTATGCCGTGGCTGTTATTTTTGTT--AGCATGCATCTGGCACTTTTGTTCA-G 99
consensus_9826#4      GTTTTCTTATGCCGTGGC-GTTATTTTTGTT--AGCATGCAACTGGCACTTTTGTTCA-G 98
consensus_9826#3      ATTCAGACATTTAATCGTCACTATACTGG----AGCTTTAATATATCAGAACGATTTA-G 94
consensus_9826#2      ---------------------TTTTCGGTCCGAGGCGGAAACCGAACTGGATTACTCACG 39
consensus_9826#5      ATTCAGACATTTAATCGTCACTACCTCAGATACAGTGGAAACCGAACTGGATTACTCACG 112
consensus_9826#1      ATTAAGATAATCGAACATACATTTCT-------AAAGCTCACTTATCGGGTTTTATTCCA 113
                                           *                  *     *        *    

consensus_9826#0      TTTATATCGCTAA-ATGTCTTCTGAAACAACGTTC--GCCAAATACAA--CAGACAACAA 154
consensus_9826#4      TTTATAT-GCTAA-AT-TCGTCTGAAACAA-GTTC--GCCAAATACAA--CAGACAACAA 150
consensus_9826#3      ATGTAATCATTGA-AG-TGATAAACCGGAGGATGC--GAGATGAAGAG--CCGAATTCTG 148
consensus_9826#2      AAGTCCTGATTGGTATCTTCTCAAAATTAAACTTG--GATATTTTGAATCCCGACAAAGT 97
consensus_9826#5      AAGTCCTGATTGGTATCTTCTCAAAATTAAACTTG--GATATTTTGAATCTCGACAAAGT 170
consensus_9826#1      AAGTCCT-ACATGTGTTATAATGACATTAAACTTGTTATGACCCGGAGTATCCTAGATCT 172
                            *                     *   *       *     *             

consensus_9826#0      GACACC--G---TTATTAAAAGCG--TTACT---AGCTAAACCTG-TCTCATC--ACGTT 201
consensus_9826#4      GACACC--G---TTATTAAAAGCG--TTACT---AGCTAAACCTG-TCTCATC--ACGTT 197
consensus_9826#3      AGCATC--TGCCTCATTTACTGCTACTTCTC---AACCTCATATG-TATCAAT--ACGAA 200
consensus_9826#2      AATGAT--CAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGAC 155
consensus_9826#5      AATGAT--CAAGAATGTAACTGGGGGTTGCATGAGGATAGACATGATATCATTGAACGAC 228
consensus_9826#1      GATACTAATACATAAGGTGCTACGCGCTACCTCTCTCCCAACTGACTACTTAAGCAAGAA 232
                                                 *            *     *        * *  

consensus_9826#0      TA----T-TCCTTGAAATAATTATTCAGA-----CATTTA-ATCGTCACTTGGATCCAAT 250
consensus_9826#4      TA----T-TCCTTGAAATAATTATTCAGA-----CATTTA-ATCGTCACTTGGATCCAAT 246
consensus_9826#3      TA----T-TGCGAATAAAAGTTCTTTGAA-----AATTAACGATACTATGGAAATACTTT 250
consensus_9826#2      TA----AATGAGCTAAATACTCTTCTGGA-----AAAAGCTGATCCCAAGTTAGTCGTTT 206
consensus_9826#5      TA----AATGAGCTAAATACTCTGCTGGA-----AAAAGCTGATCCCAAGTTAGTCGTTT 279
consensus_9826#1      AACAGGAATGGATGAGAACGTCTACTGGGCTACCAAATAATATATATATATATATATATA 292
                       *      *       *   *              *           *      *     

consensus_9826#0      CTTCATGGT-TACG-----TTTTTACCAAGCGATAAAAATTACGATTC---A-----TCA 296
consensus_9826#4      CTTCATGGT-TACG-----TTTTTACCAAGCGATNNNNNNNNNNNNNN---A-----GCA 292
consensus_9826#3      CACCTCTTT-CACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCG---ATGGCTGCA 306
consensus_9826#2      GTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCG 266
consensus_9826#5      GTTATCTGCATTCGGTAAAATTTCTACCACTGCTCTCTCTTGTTGGCCTATATCAACGCG 339
consensus_9826#1      TATATATGCATTTC-TACCCTTTAGAAGATCAATCTATTTCTTAGCCAATGATATGCATT 351
                                          * *          *                 *        

consensus_9826#0      AATAATTTAACACAGTGGGCTAGCTTTGC--TCGATTTG---ATGCTACTTG-GACGAGT 350
consensus_9826#4      AATAATTTAACACAGTGGGCTAGCTTTGC--TCGATTTG---ATGCTACTTG-GACGAGT 346
consensus_9826#3      CATCAACAAATAAAGTCGGTTGTCTGTTCA-TCGGATCG---AAAGTATT---GATT-GT 358
consensus_9826#2      AAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTG---TCGGTATTT----TGTGT 319
consensus_9826#5      AAACCATGAATAAAATACGTTCCAAGCTCCTTAGATCTG---TCGGTATTT----TGTGT 392
consensus_9826#1      TATCCTTCGGGACATTTCTGATTGTCATCAAATGACCTCATTTCGTTACTTCTGATTGGC 411
                       *         * * *            *    *            ** *        * 

consensus_9826#0      TCCTCATAAAAGAACTTAGA-GGATTTTATTAAAAA-----GTTTGAAGCTAATTCACAC 404
consensus_9826#4      TCCTCAGAAAAGAACTTAGA-GGATTTTATTAAAAA-----GTTTGAAGCTAATTCACAC 400
consensus_9826#3      TTATTAATTGTTAACTTGAG-AAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTT 417
consensus_9826#2      TCTCTAGAT-TCCGCTTGTA-TTCGTGT-TTGCCTTGGGTCAGTTCTACCAACTGAGCTC 376
consensus_9826#5      TCTCTAGAT-TCCGCTTGTA-TTCGTGT-TT----------------------------- 420
consensus_9826#1      TCACTGTATCACCACTTACCCTTTGAGTAAGTTCCACAAATAAGAATGAACCAGAACTCA 471
                      *             ***          *                                

consensus_9826#0      TTACGT-----AAAGATACTCACAATGATTTGGAATATATTCAAGGTCTCTGGACTCATA 459
consensus_9826#4      TTACGT-----AAAGATACTC--------------------------CTCTGGACTCATA 429
consensus_9826#3      TTTCTTTCCCAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTT 477
consensus_9826#2      ATTCGAGAGC-TACGAGGTTCTTCACATTGTGAGATTCCATATCTCGCTTTACGGTTACG 435
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      TAAAGTATTCATAGTTGTTTACTTACACAAACCACAATGACTTGTTTCAATTCACTGTTA 531
                                                                                  

consensus_9826#0      ATGTAGGCCAAG-CAGCTGAGTTGGACAGTAAACCTGTTTTACCTGTTAATGCTAGCCCA 518
consensus_9826#4      ATGTAGGCCAAG-CAGCTGAGTTGGACAGTAAACCTGTTTTACCTGGTAATGCTAGCCCA 488
consensus_9826#3      AAATAATACTAT-TCACAGAGT-----ACTAAACATGTTTATTGTTATTGTAATAAATAT 531
consensus_9826#2      ATTTCTTTCTTT-ATTAATTAGTCAGTCTCAGACTCTTCCAGTTGACTTGCACAAATCAC 494
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      AATTTACAATACGTCATGTAATAAAGAAGTATATTAATATTGCTTTCCTTTTAGAATCAC 591
                                                                                  

consensus_9826#0      AACACACCAAACAACAGTGTAGTAAAATTTCTCTGCGATCTGTTCTCTTACTCAGATACT 578
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      TTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACAAAAGTCAA 554
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      TTGATCAAGAACTGTTTACTCACCTCATTAATCTATGTGATACTTCAAAACANAAGTCAA 651
                                                                                  

consensus_9826#0      GGAGCTTTAATATATCAGAACGATTTAGATGTAATCATTGAAGTGATAAACCGGAGGATG 638
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      GTTTAATTGATCTAGAGAATCATTCTCCTGGTAATCAAATCCTAGTCACGGAT------- 607
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      GTTTAATTGATCTAGAGAATCATTCT---------------------------------- 677
                                                                                  

consensus_9826#0      CGAGATGAAGAGCCGAATTCTGAGCATCTGCCTCATTTACTGCTACTTCTCAACCTCATA 698
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      TGTATCAATACGAATATTGCGAATAAAAGTTCTTTGAAAATTAACGATACTATGGAAATA 758
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      CTTTCACCTCTTTCACAAGCATCTCTTAGTCCACGTTCTAAAACACTGGCGATGGCTGCA 818
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      CATCAACAAATAAAGTCGGTTGTCTGTTCATCGGATCGAAAGTATTGATTGTTTATTAAT 878
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      TGTTAACTTGAGAAAATTTATTGATAATTCGTATTTCTGAACATTCCTTTTTTTCTTTCC 938
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      CAAACAATTTTCATTATCATCAGAATTCCAGGTTTCTATACAGAACTCTTTAAATAATAC 998
consensus_9826#4      ------------------------------------------------------------
consensus_9826#3      ------------------------------------------------------------
consensus_9826#2      ------------------------------------------------------------
consensus_9826#5      ------------------------------------------------------------
consensus_9826#1      ------------------------------------------------------------
                                                                                  

consensus_9826#0      TATTCACAGAGTACTAAACATGTTTATTGTTATTGTAATAAATAT 1043
consensus_9826#4      ---------------------------------------------
consensus_9826#3      ---------------------------------------------
consensus_9826#2      ---------------------------------------------
consensus_9826#5      ---------------------------------------------
consensus_9826#1      ---------------------------------------------