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Schistosoma mansoni
cluster # 9850 cluster # 9850       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9850#0 length = 1312 sequences # 6  
consensus_9850#1 length = 774 sequences # 2  
consensus_9850#2 length = 563 sequences # 1  
consensus_9850#3 length = 445 sequences # 2  

consensusID : consensus_9850#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1312
fasta sequence
                              [CTACGAGGCCANAATTCGGCACGAGGGCCAAGTTTCATTCACTTTACGGCGGTAATTTGATACTAAATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATCAAGTAATATACAATTGNGTTTGATGCTGTAACTGATGTAATCATTAAAAACACCTCAGGATGTGGGTATTCTAATCTTATCAACAGAAAATAGTCATCTTTTCTTATTTTAAACTCTTTCAAAACAGTTTTGTAATTAAATTAGCAATTATTTTTATATTTACGATTGCTTTTTAACTGTCTGTTACNTCCGGNCTCANTTACAAGGATTACACTCANCCATTTNTTTTAT]

[+] EMBL CD080286             [CTACGAGGCCANAATTCGGCACGAGGGCCAAGTTTCATTCACTTTACGGCGGTAATTTGATACTAAATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGG TTTATNCAAAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AF540395             [                                                                 AATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATCAAGTAATATACAATTGNGTTTGATGCTGTAACTGATGTAATCATTAAAAACACCTCAGGATGTGGGTATTCTAATCTTATCAACAGAAAATAGTCATCTTTTCTTATTTTAAACTCTTTCAAAACAGTTTTGTAATTAAATTAGCAATTATTTTTATATTTACGATTGCTTTTTAACTGTCTGTTACNTCCGGNCTCANTTACAAGGATTACACTCANCCATTTNTTTTAT]
[+] EMBL BF936517             [                                                                 AATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD189451             [                                                                  ATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD184189             [                                                                                                                                                                                                                                                             tttgcagAATTATTCATATGTCTGGATATACGGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATG GT ATTTT  TACATTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD137246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAACACAACAGGATGTCTTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGGCAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGT                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_9850#0 CTACGAGGCCANAATTCGGCACGAGGGCCAAGTTTCATTCACTTTACGGCGGTAATTTGA TACTAAATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAA GAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGT GAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGC ACAATAGTTAAACAAATGAAAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAA ACCTACAAGCCAGTCGTATTCAGCAACACTATCCAGAGCATGGTAGCCATACTGAGGGCT ATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTC CTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAG AGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTG AATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATT CCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCAC TTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGA AAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGT GAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACA TTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTA AACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCA GAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAA AATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGAT CAAGTAATATACAATTGNGTTTGATGCTGTAACTGATGTAATCATTAAAAACACCTCAGG ATGTGGGTATTCTAATCTTATCAACAGAAAATAGTCATCTTTTCTTATTTTAAACTCTTT CAAAACAGTTTTGTAATTAAATTAGCAATTATTTTTATATTTACGATTGCTTTTTAACTG TCTGTTACNTCCGGNCTCANTTACAAGGATTACACTCANCCATTTNTTTTAT



consensusID : consensus_9850#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 774
fasta sequence
                              [TCGAGGCCAGAATTTGGCACGAGGTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATACAAGTAATATACAATTTGTGTTTGATGCTGTAACTGATGTAATCATTAAAAACAACCTCAAGGATTGTGGGATATTCTAATCTTATACAACAGAAAATTAGTCATCTTTTCTTATTTTAAACTTCTTTACAAAACAGTTTTTGTAAATTAAATGTAGCAATTTATTTATTATATTTTACGTATATGCTTTTTTAACTGTTCTGTTTAACTTCCGAGTACTCAAGTGTAACAAGAATGTAACAGCTTCAAGCCATATATATATTTTTATTGGTATTAGTATCTAGCTATATTTTCTCAGTATAATGAATGCCATTTGTT-AACACTGGCAG-AACTTAA-TTTATCNTTGNTTNTG-TATTTCTAGNNGTCTG-TTNAATCCACTACTTGTAAATAAATCTTGCCG]

[+] EMBL CD079630             [TCGAGGCCAGAATTTGGCACGAGGTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATACAAGTAATATACAATTTGTGTTTGATGCTGTAACTGATGTAATCATTAAAAACAACCTCAAGGATTGTGGGATATTCTAATCTTATACAACAGAAAATTAGTCATCTTTTCTTATTTTAAACTTCTTTACAAAACAGTTTTTGTAAATTAAATGTAGCAATTTATTTATTATATTTTACGTATATGCTTTTTTAACTGTTCTGTTTAACTTCCGAGTACTCAAGTGTAACAAGAATGTAACAGCTTCAAGCCATATATATATTTTTATTGGTATTAGTATCTAGCTATATTTTCTCAGTATAATGAATGCCATTTGTT AACACTGGCAG AACTTAA TTTATCNTTGNTTNTG TATTTCTAGNNGTCTG TTNAATCCACTACTTGTAAATAAATCTTGC  ]
[-] EMBL CD073894             [                                                                                                                       TGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATACAAGTAATATACAATTTGTGTTTGATGCTGTAACTGATGTAATCATTAAAAACAACCTCAAGGATTGTGGGATATTCTAATCTTATACAACAGAAAATTAGTCATCTTTTCTTATTTTAAACTTCTTTACAAAACAGTTTTTGTAAATTAAATGTAGCAATTTATTTATTATATTTTACGTATATGCTTTTTTAACTGTTCTGTTTAACTTCCGAGTACTCAAGTGTAACAAGAATGTAACAGCTTCAAGCCATATATATATTTTTATTGGTATTAGTATCTAGCTATATTTTCTCAGTATAATGAATGCCATTTGTTAAACACTGGCAGAAACTTAATTTTATCTTTGTTTTTGTTATTTCTAGTGTTCTGTTTAAATCCACTACTTGTAAATAAATCTTtgcg]


>consensus_9850#1 TCGAGGCCAGAATTTGGCACGAGGTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGT GGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGAT GGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTAT CGTTTTATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGAC CATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTCG ATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCAC ATGCGCAACAGATACAAGTAATATACAATTTGTGTTTGATGCTGTAACTGATGTAATCAT TAAAAACAACCTCAAGGATTGTGGGATATTCTAATCTTATACAACAGAAAATTAGTCATC TTTTCTTATTTTAAACTTCTTTACAAAACAGTTTTTGTAAATTAAATGTAGCAATTTATT TATTATATTTTACGTATATGCTTTTTTAACTGTTCTGTTTAACTTCCGAGTACTCAAGTG TAACAAGAATGTAACAGCTTCAAGCCATATATATATTTTTATTGGTATTAGTATCTAGCT ATATTTTCTCAGTATAATGAATGCCATTTGTTAACACTGGCAGAACTTAATTTATCNTTG NTTNTGTATTTCTAGNNGTCTGTTNAATCCACTACTTGTAAATAAATCTTGCCG



consensusID : consensus_9850#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 563
fasta sequence
                              [TTCGGGCCATACGAAGTGATAATTACGCTGTGGTCCTCAATCTTTACACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGTCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAGCGAGATATTTTCGAGAATAAAATAATGGAATCACCGTTGACA]

[+] EMBL AI723358             [TTCGGGCCATACGAAGTGATAATTACGCTGTGGTCCTCAATCTTTACACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGTCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAGCGAGATATTTTCGAGAATAAAATAATGGAATCACCGTTGACA]


>consensus_9850#2 TTCGGGCCATACGAAGTGATAATTACGCTGTGGTCCTCAATCTTTACACGGACAGATGTT GACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGCTTTGGTATGACCCAGGTGTT CAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCATACTTCCTT GACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGATGTCCTTCGG ACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGATTAAGCATC AGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCATTGTTTCGAA GGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAA GTCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACC AGGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAGCGAGATATTTTCGAGAATA AAATAATGGAATCACCGTTGACA



consensusID : consensus_9850#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 445
fasta sequence
                              [ATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAGTATGTTACTGTAATATTTATTTGCAGAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACCATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGC]

[+] EMBL CD185814             [ATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATAGTTAAACAAATGAAGTATGTTACTGTAATATTTATTTGCAGAATTATTCATATGTCTGGATATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACCATCCAGAGCATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAGGC]
[+] EMBL CD181804             [ATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAACTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCTTCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGTCAGTCG                                                                                                                                                                                                                                                                                        ]


>consensus_9850#3 ATCTTTTCGGCTCTTGTTTCGAAAGTTGTAGATATGGGATGTTTTGTGAGTAAAGAAAAA CTAGCTGCAATAGCTCGATCCAAAGACATTGACAGGAAACTAAAGGCTGATGGTGAGGCT TCATTCAAAGAGGCCAAACTGTTGCTCCTTGGTGCTGGAGAGTCGGGGAAAAGCACAATA GTTAAACAAATGAAGTATGTTACTGTAATATTTATTTGCAGAATTATTCATATGTCTGGA TATACCGAAGAAGAATGCAAAACCTACAAGCCAGTCGTATTCAGCAACACCATCCAGAGC ATGGTAGCCATACTGAGGGCTATGGAACAACTGCAGATATGTTGTGCATATCCGAATGCA ATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACAGATGTTGACGTGCTACCTGAG GAAGTATTTGGTGCGCTGAAGAGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9850#0      ------------------------------------------------------------
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      TCGAGGCCAGAATTTGGCACGAGGTCATTGTTTCGAAGGCGTCACCGCAATAATATTTGT 60
                                                                                  

consensus_9850#0      ----------------------------------------CTACGAGGCCANAATTCGGC 20
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      GGTTGCTATGAGTGAATACGATCTAACCCTTGCTGAAGATCAAGAAATGAATAGAATGAT 120
                                                                                  

consensus_9850#0      ACGAGGGCCAAGTTTCATTCACTTTACGGCGGTAATTTGATACTAAATCTTTTCGGCTCT 80
consensus_9850#3      ----------------------------------------------ATCTTTTCGGCTCT 14
consensus_9850#2      -------TTCGGGCCATACGAAGTGATAATTACGCTGTGGTCCTCAATCTTTACACGGAC 53
consensus_9850#1      GGAATCTATGACATTGTTTACTTCAATATGTAATAACCAGTGGTTTACGGAAACAAGTAT 180
                                                                    *      *      

consensus_9850#0      TGTTTCGAAAGTTGTAGATATGGGA-TGTTTTGTGAGTAAAGAAA---AACTAGCTGCAA 136
consensus_9850#3      TGTTTCGAAAGTTGTAGATATGGGA-TGTTTTGTGAGTAAAGAAA---AACTAGCTGCAA 70
consensus_9850#2      AGATGTTGACGTGCTACCTGAGGAAGTATTTGGTGCGCTGAAGAG---GCTTTGGTATGA 110
consensus_9850#1      CGTTTT-ATTTTTAAACAAGCGAGATATTTTCGAGAATAAAATAATGAAATCACCGTTGA 239
                       * *       *   *     *  *   *** * *     *  *               *

consensus_9850#0      TAGCTCGATCCAAAGA---CATTGACAGGA------------AA---CTAAAGGCTGATG 178
consensus_9850#3      TAGCTCGATCCAAAGA---CATTGACAGGA------------AA---CTAAAGGCTGATG 112
consensus_9850#2      CCCAGGTGTTCAAACAGC-TGTTAATAGGTCTCGAGAATTTCAA---CTGAATGATTCTG 166
consensus_9850#1      CCATATGTTTCCCAGAGTACACTGGTGGGAATAACTATGAAGAAGCTTCAGAGTATATTC 299
                              * *  * *      *    **             **       *   *  * 

consensus_9850#0      -GTGAGGCTTC----ATTCAAAGA-----GGCCAAACTGTTGCTCCTTGGT---GCTGGA 225
consensus_9850#3      -GTGAGGCTTC----ATTCAAAGA-----GGCCAAACTGTTGCTCCTTGGT---GCTGGA 159
consensus_9850#2      CATCATACTTC----CTTGACTCATT---GGATAGGTTGTCAAGTCCTGGTTATATTCCA 219
consensus_9850#1      GATCATGTTTTGAAAATTCAAACACTCGTAGTGGACCTAAAGATATCTATTCCCATTTCA 359
                        * *   **      ** *   *      *      *         *  *     *  *

consensus_9850#0      GAGTCGGGGAAAAGC--------ACAATAGTTA-AACAAATG----AA------------ 260
consensus_9850#3      GAGTCGGGGAAAAGC--------ACAATAGTTA-AACAAATG----AAGT-ATGTTACTG 205
consensus_9850#2      ACACAACAGGATGTCCT--TCGGACTAGAGTCAGAACGGGTG----GAATTGTAGAAACC 273
consensus_9850#1      CATGCGCAACAGATACAAGTAATATACAATTTGTGTTTGATGCTGTAACTGATGTAATCA 419
                                *            *    * *         **     *            

consensus_9850#0      -----------------AATTATTC-ATATGTCTGGAT-ATACCGAAGAAGAATG--CA- 298
consensus_9850#3      T-AATATTTATTTGCAGAATTATTC-ATATGTCTGGAT-ATACCGAAGAAGAATG--CA- 259
consensus_9850#2      C-ACTTCTCTTTTAAGGGATTAAGC-ATCAGGATGTTTGATGTTGGAGGACAGCGTTCA- 330
consensus_9850#1      TTAAAAACAACCTCAAGGATTGTGGGATATTCTAATCTTATACAACAGAAAATTAGTCAT 479
                                        ***     **         * **     ** * *     ** 

consensus_9850#0      -------------AAACCT----ACAAGCCAGTCGTATT----------CAGCAAC---- 327
consensus_9850#3      -------------AAACCT----ACAAGCCAGTCGTATT----------CAGCAAC---- 288
consensus_9850#2      -------------GAACGA----AAGAAATGGATTCATTGTTTCGAAGGCGTCACC---- 369
consensus_9850#1      CTTTTCTTATTTTAAACTTCTTTACAAAACAGTTTTTGTAAATTAAATGTAGCAATTTAT 539
                                    ***      *  *    *      *             **      

consensus_9850#0      --ACTATCCAGAGCATGGTAGCCAT-ACTGAGGG--CTATGGAACAACTG----CAGATA 378
consensus_9850#3      --ACCATCCAGAGCATGGTAGCCAT-ACTGAGGG--CTATGGAACAACTG----CAGATA 339
consensus_9850#2      --GCAATAATATTTGTGGTTGCTATGAGTGAATA--CGATCTAACCCTTG----CTGAAG 421
consensus_9850#1      TTATTATATTTTACGTATATGCTTT-TTTAACTGTTCTGTTTAACTTCCGAGTACTCAAG 598
                           **        *    **  *   * *     *  *  ***    *    *  *  

consensus_9850#0      TGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACA 438
consensus_9850#3      TGTTGTGCATATCCGAATGCAATGAGTGATATTGCTGTGGTCCTCAATCTTTCACGGACA 399
consensus_9850#2      TCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATATGTAATAACCA 481
consensus_9850#1      TGTAACAAGAATGTAACAGCTTCAAGCCATATATATATTTTTATTGGTAT-TAGTATCTA 657
                      *         *    *  *     *   **     * *     *   * * *       *

consensus_9850#0      G--ATGTTGACGTGCTACCTGAGGAAGTATT-TGGTGCGCTGAAGAGGCTTTGGTATGAC 495
consensus_9850#3      G--ATGTTGACGTGCTACCTGAGGAAGTATT-TGGTGCGCTGAAGAGGC----------- 445
consensus_9850#2      G--GTGGT------TTACGGAAACAAGTATCGTTTTATTTTTAAACAGCGAGATATTTTC 533
consensus_9850#1      GCTATATTTTCTCAGTATAATGAATGCCATTTGTTAACACTGGCAGAACTTAATTTATCN 717
                      *   *  *       **           **          *       *           

consensus_9850#0      CCAGGTGTTCAAACAGCTGTTAATAGGTCTCGAGAATTTCAACTGAATGATTCTGCATCA 555
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      GAGAATAAAATAATGGAATCACCGTTGACA------------------------------ 563
consensus_9850#1      TTGNTTNTGTATTTCTAGNNGTCTGTTNAATCCACTACTTGTAAATAAATCTTGCCG--- 774
                                                                                  

consensus_9850#0      TACTTCCTTGACTCATTGGATAGGTTGTCAAGTCCTGGTTATATTCCAACACAACAGGAT 615
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      GTCCTTCGGACTAGAGTCAGAACGGGTGGAATTGTAGAAACCCACTTCTCTTTTAAGGGA 675
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TTAAGCATCAGGATGTTTGATGTTGGAGGACAGCGTTCAGAACGAAAGAAATGGATTCAT 735
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TGTTTCGAAGGCGTCACCGCAATAATATTTGTGGTTGCTATGAGTGAATACGATCTAACC 795
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      CTTGCTGAAGATCAAGAAATGAATAGAATGATGGAATCTATGACATTGTTTACTTCAATA 855
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TGTAATAACCAGTGGTTTACGGAAACAAGTATCGTTTTATTTTTAAACAAGCGAGATATT 915
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TTCGAGAATAAAATAATGAAATCACCGTTGACCATATGTTTCCCAGAGTACACTGGTGGG 975
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      AATAACTATGAAGAAGCTTCAGAGTATATTCGATCATGTTTTGAAAATTCAAACACTCGT 1035
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      AGTGGACCTAAAGATATCTATTCCCATTTCACATGCGCAACAGATCAAGTAATATACAAT 1095
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TGNGTTTGATGCTGTAACTGATGTAATCATTAAAAACACCTCAGGATGTGGGTATTCTAA 1155
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      TCTTATCAACAGAAAATAGTCATCTTTTCTTATTTTAAACTCTTTCAAAACAGTTTTGTA 1215
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      ATTAAATTAGCAATTATTTTTATATTTACGATTGCTTTTTAACTGTCTGTTACNTCCGGN 1275
consensus_9850#3      ------------------------------------------------------------
consensus_9850#2      ------------------------------------------------------------
consensus_9850#1      ------------------------------------------------------------
                                                                                  

consensus_9850#0      CTCANTTACAAGGATTACACTCANCCATTTNTTTTAT 1312
consensus_9850#3      -------------------------------------
consensus_9850#2      -------------------------------------
consensus_9850#1      -------------------------------------
                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)