These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1257 fasta sequence [GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA-TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA-TTACGAACAATTATAA-CTA-GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG] [-] EMBL AW053296 [GATAAAATGTTCGGGCATCATTAGGATAGGAATTCGAATCTCTTGAACAGAAAGTAAACATTTTTAGTACGGGATATTTTTACAGAAGTTGAAAGATATTTACAGATACATAGTATGCATGGACTGAACCAATGCAATTCATTTACACAATGATTAGATTTTGAAAATAGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTA ] [+] EMBL CD151678 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGGGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGATTTACGAAC ATTATTA CTA GATCAATAAGTGAATTACTTGATGT ] [+] EMBL CD151736 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCATAGCATTATTATAAAGCGAGCGAAATTCATATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCATACTCATTATGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCGAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTGCGAACTACAAAATTGTACTGATTACGGTTTTCACAAATATTTCTCAGATGCCATTCCACAGGA TTACGAACACTT TAANCTA GATCAATAAGTGAATTACTTGATG ] [+] EMBL CD113410 [ TTTGAAAATGGTTTAAGAGAAAAACCGTATAGTTGGAGAGAATCCAAAGCATTATTATAAAGCGAGCGAAATTCAGATAATCGACTTTTACCAGACACTAAGCGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCCATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAA TTTTTTGGATAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGGTGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCGGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATTAATGGATTGTAATAAACTNTGGGACCGGGAATACGAGAATGANAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAANCATTATAA CTANGATC ATAAGTGAATTACTTGATG ] [-] EMBL CD135715 [ CGCCTTACTTTCTGTCTATCTTCACCGATAATCATTCGCCAATCTCAATTGTAAGATATTGAAGAAATTGTGTAGAATAAGTCATATTCATTCAACGGGAAATTTTTTTGGACAATTTTGTAAAATTGAGTAAGATACGGAGGCGAGTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGT ] [-] EMBL CD196442 [ ACGGAGGCGGTTAGATTTTTATTTTGTGATGCACACAGTTTATCATCATAAACTTGAGGTGAAGAGAAATCAGACTCATTAGGAATCCATAATACAGGCTTTTGTAGGCGCCCAGCTAAGTAGAGATGTGACCAATCACACAAATCGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGA ] [-] EMBL CD184031 [ CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT ] [-] EMBL CD183955 [ CGGTGAGCAGACTATCCAATGAAACTACACCGTATTTAAACGACAGTTTGGTATTATCAAGTGGATCACTCCACTCAATAAATGGATTGTAATAAACTTTGGGACCGGGAATACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTT ] [+] EMBL CD200973 [ ACGAGAATGAAAAGCCTCTAGGCTTGATGATTGGTACTTTTGGGCATAATTCCGAACTACAAAATTGTAGTGATTAGGGTTTTCAGAAATATTTTTCAGATGCCATTCCGCAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAGCGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTG ] [-] EMBL CD169775 [ ATTTTTCAGATGCCATTCCACAGGA TTACGAACAATTATAA CTA GATCAATAAGTGAATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATAT ] [-] EMBL CD131826 [ AATTACTTGATGTTCTGTCCTTCTGTGGAAAAACGACAGATCCATAAGCAAAAGAAGCTACATAGTTTGTTCGATCTGTGTTAAGAGTATCGATAAGACGTTTGAGTTTTCCAACCAGTCTACTGTTTGTCATTATTCCTTTCGGAGACAGATATTTTTCTAATGCTTACGACAGTTCCGGACTTAACATCTTCTAGGCGTCTCTGACCACGACGTAGTGCTGCCTCTATACCAAAAACATCAGTCTTTTTGTAGGCACTTGCTTGAGATCGGAACTCAGAACGGATAAAGTCTTTGAGTTGATCAGAGTTAGAACCGTTATTTACACTGCTGGTACTATTTTCTAACTTGGACTTGATCTGCAACAAATCAACAGTTCGTAGAAAATTTCGATACAAACGAATAACTTCTAGTTGAAGTCTGCTATGACCAGAATTCATAAAACTTGAGTCAACATG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||