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Schistosoma mansoni
cluster # 9863 cluster # 9863       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9863#0 length = 1135 sequences # 7  
consensus_9863#1 length = 796 sequences # 3  
consensus_9863#2 length = 451 sequences # 1  
consensus_9863#3 length = 329 sequences # 1  

consensusID : consensus_9863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1135
fasta sequence
                              [AATTATCATTTACAAACATGTCACTTGATTCAGATTCATCACATAGATTAAGGAGTCCAGACAAGAGAGCGGGTAAATGCCCAGCAAGACGCTTATCAGCGGAAGGATGTGTGGCTAAACTACTTATAGCCAAGCAACAGGCATCTCTTAAACGCATGTTTTGTGTACCCGTACCATTACATTGGGAAATAGTGTTTGAGGCAGATTTATTTGTTGATAATGTTCCCGAACCGTTAGAAACGTTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGTTAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTTCTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGATTGGTTGGACTTGTTATTGTTGATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTGATATAAATGGTGTTGCCGAATTAGTTGCATATAAAACCAAGCCAAGCCAAACATTCTCCATTGCCTGACGAAGTTTAGGTCGAGCAAAATCAAAACGACGGACAAATACTCGAGGTACTAGACGTGGGAGAGCAGGAGCTAAAGATCTACCGAGTCGACGAACTAGACTTGAATAAGTAACGCTTGATGCCAAGTTGAATGCTATATTAGAAAAACAATTTCCGGATTGAGGATTCCCCAG-AGCATTGGTGTTACGTGACGTTGATGGGAGAGCGATGGCTAACACAATTAATGATAAAGCCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGTTCATGATAAACTGGGGAACTAGATTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACTCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAGGTGGACCCAAACGCCGAACTAAGTTAAGAATCCATTAAGTTGCAGCGATAGTCACTGGTCGCGTTTGGACCTGTCCTGNGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGCCACCAT]

[+] EMBL CD122997             [AATTATCATTTACAAACATGTCACTTGATTCAGATTCATCACATAGATTAAGGAGTCCAGACAAGAGAGCGGGTAAATGCCCAGCAAGACGCTTATCAGCGGAAGGATGTGTGGCTAAACTACTTATAGCCAAGCAACAGGCATCTCTTAAACGCATGTTTTGTGTACCCGTACCATTACATTGGGAAATAGTGTTTGAGGCAGATTTATTTGTTGATAATGTTCCCGAACCGTTAGAAACGTTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGTTAAATCCTAGTTGGGTTCTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTTCTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGATTGGTTGGACTTGTTATTGTTAATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTGATATAAATGGTGTTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD127219             [                                                                                                                                                                                                                       GATAATGTTCCCGAACCGTTAGAAACGTTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGTTAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTTCTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGATTGGTTGGACTTGTTATTGTTGATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTGATATAAATGGTGTTGCCGAATTAGTTGCATATAAAACCAAGCCAAGCCAAACATTCTCCATTGCCTGACGAAGTTTAGGTCGAGCAAAATCAAAACGACGGACAAATACTCGAGGTACTAGACGTGGGAGAGCAGGAGCTAAAGATCTACCGAGTCGACGAACTAGACTTGAATAAGTAACGCTTGATGCCAAGTTGAATGCTATATTAGAAAAACAATTTCCGGATTGANGATTCCCCAG AGCA                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD127684             [                                                                                                                                                                                                                        taAATGTTCCCGAACCGTTAGAAACGCTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGTTAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGGGCTTCAACCATTTTTGAATCTAAAGAATGCAATGATTTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGATTGGTTGGACTTGTTATTGTTGATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTGATATAAATGGTGTTGCCGAATTAGTTGCATATAAAACCAAGCCAAGCCAAACATTCTCCATTGCCTGACGAAGTTTAGGTCGAGCAAAATCAAAACGACGGACAAATACTCGAGGTACTAGACGTGGGAAAGCCGGATCTAAAGATCTACCGAGTCGACCAACTAGACTTGAATAAGTAACGCTTGATGCCAAATTGAATGCTTTATTTAAAAAACACTTTCCGGATTGGGGATTCCCAAA AACAT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD194182             [                                                                                                                                                                                                                                                                                                 tccctcTGTGTTAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTTCTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGATTGGTTGGACTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD121077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAATGCTATATTAGAAAAACAATTTCCGGA TGA GATCCCCCAGAAGCATTGGTGTTACGTGACGTTGATGGGAGAGCGATGGCTAACACAATTAATGATAAAGCCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGTTCATGATAACCTGGGGAACTAGATTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATA                                                                                                                                                                                                                        ]
[+] EMBL CD120979             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAATGCTATATTAGAAAAACAATTTCCGGATTGAGGATT CCCAGAAGCATTGGTGTTACGTGACGTTGATGGGAGAGCGATGGCTAACACAATTAATGATAAAGCCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGTTCATGATAAACTGGGGAACTAGATTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATA                                                                                                                                                                                                                        ]
[+] EMBL CD157726             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGGAGAGCGATGGCTAACACAATTAATGATAAAGCCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGTTCATGATAAACTGGGGAACTAGATTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACTCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAGGTGGACCCAAACGCCGAACTAAGTTAAGAATCCATTAAGTTGCAGCGATAGTCACTGGTCGCGTTTGGACCTGTCCTGNGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGCCACCAT]


>consensus_9863#0 AATTATCATTTACAAACATGTCACTTGATTCAGATTCATCACATAGATTAAGGAGTCCAG ACAAGAGAGCGGGTAAATGCCCAGCAAGACGCTTATCAGCGGAAGGATGTGTGGCTAAAC TACTTATAGCCAAGCAACAGGCATCTCTTAAACGCATGTTTTGTGTACCCGTACCATTAC ATTGGGAAATAGTGTTTGAGGCAGATTTATTTGTTGATAATGTTCCCGAACCGTTAGAAA CGTTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGT TAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTT CTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGAT TGGTTGGACTTGTTATTGTTGATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTG ATATAAATGGTGTTGCCGAATTAGTTGCATATAAAACCAAGCCAAGCCAAACATTCTCCA TTGCCTGACGAAGTTTAGGTCGAGCAAAATCAAAACGACGGACAAATACTCGAGGTACTA GACGTGGGAGAGCAGGAGCTAAAGATCTACCGAGTCGACGAACTAGACTTGAATAAGTAA CGCTTGATGCCAAGTTGAATGCTATATTAGAAAAACAATTTCCGGATTGAGGATTCCCCA GAGCATTGGTGTTACGTGACGTTGATGGGAGAGCGATGGCTAACACAATTAATGATAAAG CCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGTTCATGATAAACTGGGGAAC TAGATTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGT CTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACT CATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAGGTG GACCCAAACGCCGAACTAAGTTAAGAATCCATTAAGTTGCAGCGATAGTCACTGGTCGCG TTTGGACCTGTCCTGNGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGCCACCAT



consensusID : consensus_9863#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 796
fasta sequence
                              [CCGCAGAGTTGTTGGATAGTTTATCTAACCTAATGTGTGGAAGAAAAATTCTCAAACACTACTTTATAAAAAGTTTGTAAGCGTAAAACCATAGATTTAAAAAAGGATAGAATCGGATTAGTTATCGTTACCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAAACGCCG-AAC-AAGTTAAGAATCCATAAAGTTGCAGCGATAGTCACTGGTCGCGTATCGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGCCAACCATCGAGCATTCGGTCCACTAACAGCAGCATATAGACTATGTGCTGGAATGACAAGAGGATAATTCCTTTCATACCAATGAAATCGATACGGTGATATAGGTCCAAGAATACAGTCAGCTAGGGCAGTCCCTACAGCTAAATGAAGGCTTGGGTCGTTAATTTCAGCTGTACCCACCATAATTTTCATAATAGGAATCGTGTGGGGATGACATTTGGGTTTTGAGTTTTCGATTGTTTTAGATTCTGAAGAATTAGATGTTTCATCTTTTGTGGTTTGATAGCCTTCACCCATGCAAACTGCTGCCAATGTTCGAAGAGCAGCTTGTGAAACTCTTGGATATCTGAGTGACGATGAGGAACGTTCTTCACAAACGGTTGGCAGATATGATAAAATTCGATGAACAAATGAAGCTTTAGAACTTAGCAATGAGGTTGTTGAGTTATTACCTTCAATGGGTAATGTCCCAGATGGAAGATGCGATAAACAACCA]

[+] EMBL CD113001             [CCGCAGAGTTGTTGGATAGTTTATCTAACCTAATGTGTGGAAGAAAAATTCTCAAACACTACTTTATAAAAAGTTTGTAAGCGTAAAACCATAGATTTAAAAAAGGATAGAATCGGATTAGTTATCGTTACCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAAACGCCG AACTAAGTTAAGAATCCATAAAGTTGCAGCGATAGTCACTGGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD196699             [                                                                                                            AGAATCGGATTAGTAATCGTTACCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAAACGCCGTAAC CAGTTAAGAATCCATGAAGATGCAGCGATAGTCACTGGTCGCGTATCGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGCCAACCATCGAGCATTCGGTCCACTAACAGCAGCATATAGACTATGTGCTGGAATGACAAGAGGATAATTCCTTTCATACCAATGAAATCGATACGGTGATATAGGTCCAAGAATACAGTCAGCTAGGGCAGTCCCTACAGCTAAATGAAGGCTTGGGTCGTTAATTTCAGCTGTACCCACCATAATTTTCATAATAGGAATCGTGTGGGGATGACATTTGGGTTTTGAGTTTTCGATTGTTTTAGATTCTGAAGAATTAG                                                                                                                                                                                                                                            ]
[-] EMBL CD157792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGCTGTACCCACCATAATTTTCATAATAGGAATCGTGTGGGGATGACATTTGGGTTTTGAGTTNTCGATTGTTTTAGATTCTGAAGAATTAGATGTTTCATCTTTTGTGGTTTGATAGCCTTCACCCATGCAAACTGCTGCCAATGTTCGAAGAGCAGCTTGTGAAACTCTTGGATATCTGAGTGACGATGAGGAACGTTCTTCACAAACGGTTGGCAGATATGATAAAATTCGATGAACAAATGAAGCTTTAGAACTTAGCAATGAGGTTGTTGAGTTATTACCTTCAATGGGTAATGTCCCAGATGGAAGATGCGATAAACAACCA]


>consensus_9863#1 CCGCAGAGTTGTTGGATAGTTTATCTAACCTAATGTGTGGAAGAAAAATTCTCAAACACT ACTTTATAAAAAGTTTGTAAGCGTAAAACCATAGATTTAAAAAAGGATAGAATCGGATTA GTTATCGTTACCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGA TTTTGGAAGTGGACCCAAACGCCGAACAAGTTAAGAATCCATAAAGTTGCAGCGATAGTC ACTGGTCGCGTATCGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATCGAAGCTGTTCTGC CAACCATCGAGCATTCGGTCCACTAACAGCAGCATATAGACTATGTGCTGGAATGACAAG AGGATAATTCCTTTCATACCAATGAAATCGATACGGTGATATAGGTCCAAGAATACAGTC AGCTAGGGCAGTCCCTACAGCTAAATGAAGGCTTGGGTCGTTAATTTCAGCTGTACCCAC CATAATTTTCATAATAGGAATCGTGTGGGGATGACATTTGGGTTTTGAGTTTTCGATTGT TTTAGATTCTGAAGAATTAGATGTTTCATCTTTTGTGGTTTGATAGCCTTCACCCATGCA AACTGCTGCCAATGTTCGAAGAGCAGCTTGTGAAACTCTTGGATATCTGAGTGACGATGA GGAACGTTCTTCACAAACGGTTGGCAGATATGATAAAATTCGATGAACAAATGAAGCTTT AGAACTTAGCAATGAGGTTGTTGAGTTATTACCTTCAATGGGTAATGTCCCAGATGGAAG ATGCGATAAACAACCA



consensusID : consensus_9863#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 451
fasta sequence
                              [CTAATTCTTCAGAATCTAAAACAATCGAAAACTCAAAACCCAAATGTCATCCCCACACGATTCCTATTATGAAAATTATGGTGGGTACAGCTGAAATTAACGACCCAAGCCTTCATTTAGCTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATTGGTATGAAAGGAATTATCCTCTTGTCATTCCAGCCGTGAGTCTGGGTGAAGGCTATCGAGAGCATAGAAAGATGAAACATCTAAGTACATGCAGAATCTAAGTCAGTCGAATAGCTCAGAATCTACTTGTCTGTCCCATACGATTCCTATTATGAACATGGTCGTGGGTGCAGCTGGATTGAAAGAACCAAGGCTTCATTAAGCTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATTGGTATGAA]

[+] EMBL CD197063             [CTAATTCTTCAGAATCTAAAACAATCGAAAACTCAAAACCCAAATGTCATCCCCACACGATTCCTATTATGAAAATTATGGTGGGTACAGCTGAAATTAACGACCCAAGCCTTCATTTAGCTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATTGGTATGAAAGGAATTATCCTCTTGTCATTCCAGCCGTGAGTCTGGGTGAAGGCTATCGAGAGCATAGAAAGATGAAACATCTAAGTACATGCAGAATCTAAGTCAGTCGAATAGCTCAGAATCTACTTGTCTGTCCCATACGATTCCTATTATGAACATGGTCGTGGGTGCAGCTGGATTGAAAGAACCAAGGCTTCATTAAGCTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATTGGTATGAA]


>consensus_9863#2 CTAATTCTTCAGAATCTAAAACAATCGAAAACTCAAAACCCAAATGTCATCCCCACACGA TTCCTATTATGAAAATTATGGTGGGTACAGCTGAAATTAACGACCCAAGCCTTCATTTAG CTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATT GGTATGAAAGGAATTATCCTCTTGTCATTCCAGCCGTGAGTCTGGGTGAAGGCTATCGAG AGCATAGAAAGATGAAACATCTAAGTACATGCAGAATCTAAGTCAGTCGAATAGCTCAGA ATCTACTTGTCTGTCCCATACGATTCCTATTATGAACATGGTCGTGGGTGCAGCTGGATT GAAAGAACCAAGGCTTCATTAAGCTGTAGGGACTGCCCTAGCTGACTGTATTCTTGGACC TATATCACCGTATCGATTTCATTGGTATGAA



consensusID : consensus_9863#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence
                              [TAGAGGATCCCGAATTCGACAAGTGTGCACAGTTCATGATAAACTGGGGAACTAGATTTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACTCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAAACGCCGAACTAAGTTAAGAATCCATAAAGTTGCAGCGATAGTCACTGGTCGCGTTTGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATC]

[+] EMBL CD061232             [TAGAGGATCCCGAATTCGACAAGTGTGCACAGTTCATGATAAACTGGGGAACTAGATTTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACTCATCTTTTTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAAACGCCGAACTAAGTTAAGAATCCATAAAGTTGCAGCGATAGTCACTGGTCGCGTTTGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATC]


>consensus_9863#3 TAGAGGATCCCGAATTCGACAAGTGTGCACAGTTCATGATAAACTGGGGAACTAGATTTT TTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTCGTCTTCTGA ACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGACTCATCTTT TTCGTCCAAAAGATCAATTAGCAACTGGTAAGAAAGTAGTGATTTTGGAAGTGGACCCAA ACGCCGAACTAAGTTAAGAATCCATAAAGTTGCAGCGATAGTCACTGGTCGCGTTTGGAC CTGTCCTGGGAGGGGAGTAAGTAGTGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9863#0      AATTATCATTTACAAACATGTCACTTGATTCAGATTCATCACATAGATTAAGGAGTCCAG 60
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ------------------------------------------------------------
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      ACAAGAGAGCGGGTAAATGCCCAGCAAGACGCTTATCAGCGGAAGGATGTGTGGCTAAAC 120
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ------------------------------------------------------------
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      TACTTATAGCCAAGCAACAGGCATCTCTTAAACGCATGTTTTGTGTACCCGTACCATTAC 180
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ------------------------------------------------------------
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      ATTGGGAAATAGTGTTTGAGGCAGATTTATTTGTTGATAATGTTCCCGAACCGTTAGAAA 240
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ------------------------------------------------------------
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      CGTTTGTGGTTGATTGAGGAGAATTGCCACCCATTTGTGTTGCATGAAAGCTCAATGTGT 300
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      -----------------------------------------------------------C 1
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      TAAATCCTAGTTGGGTTTTGATCTCACATACGATTGCATTAAAATGTGCTTCAACCATTT 360
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      CGCAGAGTTGTTGGATAGTTTATCTAACCTAATGTGTGGAAGAAAAATTCTCAAACACTA 61
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      CTGAAACTAAAGAATGCAATGAATTCGGTGCGGGTGATGAAGACAATTGAGTATTTTGAT 420
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      CTTTATAAAAAGTTTGTAAGCGTAAAACCATAGATTTAAAAAAGGATAGAAT---CGGAT 118
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      TGGTTGGACTTGTTATTGTTGATGACGAACCCGATATATTAGGATATGAAGTGTTAGTTG 480
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      TAGTTATCGTTACCATCTTTTTCGTCCAAAA-GATCAATTAGCAACTGGTAAGAAAGTAG 177
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      ATATAAATGGTGTTGCCGAATTAGTTGCATATAAAACCAAGCCAAGCCAAACATTCTCCA 540
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ---TGATTTTGGAAGTGGACCCAAACGCCGAACAAGTTAAGAATCCATAAAGTTGCAGCG 234
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      TTGCCTGACGAAGTTTAGGTCGAGCAAAATCAAAACGACGGACAAATACTCGAGGTACTA 600
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ATAG-TCACTGGTCGCGTATCGGACCTGTCCTGGGAGGGGAGTAAGTAGTGATCGAAGCT 293
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      GACGTGGGAGAGCAGGAGCTAAAGATCTACCGAGTCGACGAACTAGACTTGAATAAGTAA 660
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      GTTCTGCCAACCATCGAGCATTCGGTCCACTAACAGCAGCATATAGACTATGTGCTGGAA 353
consensus_9863#2      ------------------------------------------------------------
                                                                                  

consensus_9863#0      CGCTTGATGCCAAGTTGAATGCTATATTAGAAAAACAATTTCCGGATTGAGGATTCCCCA 720
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      TGACAAGAGGATAATTCCTT-TCATACCAATGAAATCGATACGGTGATATAGGTCCAAGA 412
consensus_9863#2      ----------------CTAATTCTTCAGAATCTAAAACAATCGAAAACTCAAAACCCAAA 44
                                                                                  

consensus_9863#0      GAGCATTGGTGTTACGTGACGTTGATGGGAGAGCGATGGCTAACACAATTAATGATAAAG 780
consensus_9863#3      ------------------------------------------------------------
consensus_9863#1      ATACAGTCAGCTAGGGCAGTCCCTACAGCTAAATGAAGGCTTGGGTCGTTAATT------ 466
consensus_9863#2      TGTCATCC--CCACACGATTCCTATTATGAAAATTATGGTGGGTACAGCTGAAA------ 96
                                                                                  

consensus_9863#0      CCAAATCTGGGCGTCCAATTTGCTGGGCTAATGTGCACAGT-TCATGATAAACTGGGGAA 839
consensus_9863#3      -----TAGAGGATCCCGAATTC---GACAAGTGTGCACAGT-TCATGATAAACTGGGGAA 51
consensus_9863#1      TCAGCTGTACCCACCATAATTT---TCATAATAGGAATCGTGTGGGGATGACATTTGGGT 523
consensus_9863#2      TTAACGACCCAAGCCTTCATTT----AGCTGTAGGGACTGC-CCTAGCTGAC-TGTATTC 150
                                    *    **          *  * *  *      * * *  *      

consensus_9863#0      CTAGATTTTTT-ATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTC 898
consensus_9863#3      CTAGATTTTTTTATCATCACCGATCGCTTGTGTCAAGCTTGTAATAAGCTCTGAACGTTC 111
consensus_9863#1      TTTGAGTTTTCGATTGTTTTAGATT-CTGAAGAATTAGATGTTTCATCTTTTGTGGTTTG 582
consensus_9863#2      TTGGACCTATATCACCGTATCGATTTCATTGGTATGAAAGGAATTATCCTCTTGTCATTC 210
                       * **  * *           ***  *    *        *    *   * *     ** 

consensus_9863#0      GTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGA 958
consensus_9863#3      GTCTTCTGAACTTCTATCATAAATTAAGCCCAAAGTTGCAACAACAACACACTGTACAGA 171
consensus_9863#1      ATAGCCTTCACCCATG---CAAACTGCTGCCAATGTTCGAAGAGCAGC---TTGTG-AAA 635
consensus_9863#2      -CAGCCGTGAGTCTGGGTGAAGGCTATCGAGAGCATAGAAAGATGAAACATCTAAGTACA 269
                           *   *          *   *      *   *   ** *  *      *    * *

consensus_9863#0      CTCA---TCTTTTTCGTCCAAAAGATCAATTA-GCAACTGGTAAGAAAGTAGTGATTTTG 1014
consensus_9863#3      CTCA---TCTTTTTCGTCCAAAAGATCAATTA-GCAACTGGTAAGAAAGTAGTGATTTTG 227
consensus_9863#1      CTCT---TGGATATCTGAGTGACGATGAGGAACGTTCTTCACAAACGGTTGGCAGATATG 692
consensus_9863#2      TGCAGAATCTAAGTCAGTCGAATAGCTCAGAATCTACTTGTCTGTCCCATA-CGATTCCT 328
                        *    *     **      *         *      *          *      *   

consensus_9863#0      GAGGTGGACCCAAACG-----CCGAACTAAG-TTAAGAATCCATTAAGTTGCAGCGAT-A 1067
consensus_9863#3      GAAGTGGACCCAAACG-----CCGAACTAAG-TTAAGAATCCATAAAGTTGCAGCGAT-A 280
consensus_9863#1      ATA--AAATTCGATGA-----ACAAATGAAGCTTTAGAACTTAGCAATGAGGTTGTTG-A 744
consensus_9863#2      ATTATGAACATGGTCGTGGGTGCAGCTGGATTGAAAGAACCAAGGCTTCATTAAGCTGTA 388
                             *              *      *     ****   *                *

consensus_9863#0      GTCACTGGTCGCGTTTGGACCTGTCCTGNGAGGGGAGTAAG-TAGTGATCGAAGCTGTTC 1126
consensus_9863#3      GTCACTGGTCGCGTTTGGACCTGTCCTGGGAGGGGAGTAAG-TAGTGATC---------- 329
consensus_9863#1      GTTATTACCTTCAATGGGTAATGTCCCAGATGGAAGATGCGATAAACAACCA-------- 796
consensus_9863#2      GGGACTGCCCTAGCTGACTGTATTCTTGGACCTATATCACCGTATCGATTTCATTGGTAT 448
                      *  * *        *        **                 **   *            

consensus_9863#0      TGCCACCAT 1135
consensus_9863#3      ---------
consensus_9863#1      ---------
consensus_9863#2      GAA------ 451
                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)