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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9865#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 720 fasta sequence
[ACAGGAGGAAACCTCGGATAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT-GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGT-AAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT-GGAAAAGGGAC-TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA]
[+] EMBL CD198897 [ACAGGAGGAAACCTCGGATAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCNACTCATCATTACGTGTTTTTACCAC ]
[+] EMBL CD070102 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTTTCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGNCACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGATACCAACTATC ]
[+] EMBL CD198785 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTNCAACTAAACAGNTAATAGTTAGATACCAACTAT ]
[+] EMBL CD070159 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCTNGGTC AACTAACAAGNTAATAGNTAGATACCA ]
[+] EMBL CD198814 [ TAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGNTAGATAC ]
[+] EMBL CD070149 [ TAATACTTTGTAGCACGTCACACTTTGCAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGA ]
[+] EMBL CD070051 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATNTCTATTTGT AAATAGAGCTAGCGGTA ]
[-] EMBL CD070185 [ atagGGTTATATTCAGACAGGACCTCTTACAGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ]
[-] EMBL CD070089 [ gCAGACATGACCTCTTACAGGCCCAAATCAACCGATGTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATGCCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ]
[-] EMBL CD070101 [ gGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGT TTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAGTGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAACTGTTG ]
[-] EMBL CD198775 [ nCAAATCANCCGATTTCATGCAACTCATCATTACGTG TTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ]
[-] EMBL CD198738 [ TGGCGGA TGAGTTTNGGAAAA GGACTTTGTTGAACAACTTTGAATGACTGAAATATNTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||