These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9865#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 720 fasta sequence [ACAGGAGGAAACCTCGGATAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT-GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGT-AAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT-GGAAAAGGGAC-TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA] [+] EMBL CD198897 [ACAGGAGGAAACCTCGGATAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCNACTCATCATTACGTGTTTTTACCAC ] [+] EMBL CD070102 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTTTCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGNCACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGATACCAACTATC ] [+] EMBL CD198785 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTNCAACTAAACAGNTAATAGTTAGATACCAACTAT ] [+] EMBL CD070159 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCTNGGTC AACTAACAAGNTAATAGNTAGATACCA ] [+] EMBL CD198814 [ TAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGNTAGATAC ] [+] EMBL CD070149 [ TAATACTTTGTAGCACGTCACACTTTGCAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGA ] [+] EMBL CD070051 [ TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATNTCTATTTGT AAATAGAGCTAGCGGTA ] [-] EMBL CD070185 [ atagGGTTATATTCAGACAGGACCTCTTACAGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ] [-] EMBL CD070089 [ gCAGACATGACCTCTTACAGGCCCAAATCAACCGATGTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATGCCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ] [-] EMBL CD070101 [ gGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGT TTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAGTGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAACTGTTG ] [-] EMBL CD198775 [ nCAAATCANCCGATTTCATGCAACTCATCATTACGTG TTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG ] [-] EMBL CD198738 [ TGGCGGA TGAGTTTNGGAAAA GGACTTTGTTGAACAACTTTGAATGACTGAAATATNTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||