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Schistosoma mansoni
cluster # 9865 cluster # 9865       Sequences # 12       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9865#0 length = 720 sequences # 12  

consensusID : consensus_9865#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 720
fasta sequence
                              [ACAGGAGGAAACCTCGGATAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT-GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGT-AAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT-GGAAAAGGGAC-TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA]

[+] EMBL CD198897             [ACAGGAGGAAACCTCGGATAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCNACTCATCATTACGTGTTTTTACCAC                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD070102             [                  TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTTTCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGNCACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGATACCAACTATC                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD198785             [                  TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTNCAACTAAACAGNTAATAGTTAGATACCAACTAT                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD070159             [                  TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCTNGGTC AACTAACAAGNTAATAGNTAGATACCA                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD198814             [                  TAACACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGNTAGATAC                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD070149             [                  TAATACTTTGTAGCACGTCACACTTTGCAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGNTAATAGTTAGA                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD070051             [                  TAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGGTTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGTTATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCTGCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTTCTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATNTCTATTTGT AAATAGAGCTAGCGGTA                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD070185             [                                                                                                                                                                                                                                                           atagGGTTATATTCAGACAGGACCTCTTACAGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG                                                                                                                                    ]
[-] EMBL CD070089             [                                                                                                                                                                                                                                                                       gCAGACATGACCTCTTACAGGCCCAAATCAACCGATGTCATGCAACTCATCATTACGTGTTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATGCCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG                                                                                                                                    ]
[-] EMBL CD070101             [                                                                                                                                                                                                                                                                                         gGGCNCAAATCAACCGATTTCATGCAACTCATCATTACGT TTTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAGTGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAACTGTTG                                                                                                                                    ]
[-] EMBL CD198775             [                                                                                                                                                                                                                                                                                             nCAAATCANCCGATTTCATGCAACTCATCATTACGTG TTTTACCACTATGCT GGTCAAACTAACAAGTTAATAGTTAGATACCAACTATCTATTTCTATTTGTAAAATAGAGCTAGCGGTACCATCCTTCCAATCTGTGGCGGATTGAGTTT GGAAAAGGGAC TTGTTGAACAACTTTGAATGACTGAAATATTTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTG                                                                                                                                    ]
[-] EMBL CD198738             [                                                                                                                                                                                                                                                                                                                                                                                                                                        TGGCGGA TGAGTTTNGGAAAA GGACTTTGTTGAACAACTTTGAATGACTGAAATATNTTCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACACTTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTCTCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGTGTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA]


>consensus_9865#0 ACAGGAGGAAACCTCGGATAATACTTTGTAGCACGTCACACTTTACAGACCTTCATCCGG TTTCGGTCTTGTTTCACTCCGTATTAGGTTGCAGAGGAGGTTTCTCATCCAGTCCACCGT TATTCTGAAGCTGGAAAGCTTCTGCACAAATCCTGAGTGAAACAGTCTATCGAATGCCCT GCTGCAAATTATGAGTGTTACATCAATAGGAAATCCGATCTCTTGAGTCACCGACTTGTT CTTGTCCTGCGATTAGGTTATATTCAGACAGGACCTCTTACAGGCCCAAATCAACCGATT TCATGCAACTCATCATTACGTGTTTTTACCACTATGCTGGTCAAACTAACAAGTTAATAG TTAGATACCAACTATCTATTTCTATTTGTAAATAGAGCTAGCGGTACCATCCTTCCAATC TGTGGCGGATTGAGTTTGGAAAAGGGACTTGTTGAACAACTTTGAATGACTGAAATATTT TCTACAAGAGATGAAAGCAATAAAAGTTTAGGCTACTAAGTATTCAAGAACATGTCACAC TTACTGATACTATAGTCCGTGTCTTGGCAGTTTCACTGCGAATTGTTGATATGAATATTC TCCAAGTGGACCTTACCTAAGTGATTCAATGAAATTCCAGCCCCGGACGCGTCAATCAGT GTTTGGATTCCTAAATAACCAGGGAATTTCGCCAGTTCGTTCATTCTAACTATTTACTCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)