cluster # 9870

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Schistosoma mansoni
cluster # 9870 cluster # 9870 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9870#0 length = 1311 sequences # 10

consensus_9870#1 length = 599 sequences # 1
consensus_9870#2 length = 265 sequences # 1

consensusID : consensus_9870#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1311
fasta sequence

                              [ACATATTTATTATTAGGACTAGGATGTGAGGAGCGCAAAGGCTTCGTGGGTGTGAATAAACATATGTTAAATAGAACGCTGAAATAATAGAAAATATGGTAATGAATAGGAAATCAAAACATAAAACTTAGGCACAATCATCCAATCAGTGCAAGTATACAAAATACAACTAGTTACATAATGACATAAGCTTTACTCCGAGTTTTTCCATAAAATATACAATACACAGCTCATATGTACATATTACGTGATACATGAAAGATAGACAAATGGAAAATTACTACCAAAGTATCTATATCTCTAATAATATAATGAATATGTAAACAGTCACACATACACATGCAAAACATGGATTATGTGACAAGTGCTATTTCATTAAAAGTTCAATAGAAACCATATCTATTATTTTATTAGCGAGTGTCAATATGTATTCACAATTTTAAAGTCAATGATAATTAGATATCTAGAATCGAAGTAGTAAAATGCTGTGTTTAGAAAGAGGACAGTTTTTGTTTAGACAAAACATAGAGAAGCGTAGAAATGAGAGCAGGAGAAAATCACTGTGATAAGAAAAACCAATGAACAAAGGAATGGTCAACGCTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGGGATATATATAGAGATAGATGGATAAATAAATAAAGATTCTTTGATGGAGTATATAGTTGATTTTTACAGAGAAAAAAAAATGTCAC-AACCAAAAGAGAAACATACATATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGTGATATTCCTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAAGCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGAACACGATGTTGC]

[+] EMBL CD074827             [ACATATTTATTATTAGGACTAGGATGTGAGGAGCGCAAAGGCTTCGTGGGTGTGAATAAACATATGTTAAATAGAACGCTGAAATAATAGAAAATATGGTAATGAATAGGAAATCAAAACATAAAACTTAGGCACAATCATCCAATCAGTGCAAGTATACAAAATACAACTAGTTACATAATGACATAAGCTTTACTCCGAGTTTTTCCATAAAATATACAATACACAGCTCATATGTACATATTACGTGATACATGAAAGATAGACAAATGGAAAATTACTACCAAAGTATCTATATCTCTAATAATATAATGAATATGTAAACAGTCACACATACACATGCAAAACATGGATTATGTGACAAGTGCTATTTCATTAAAAGTTCAATAGAAACCATATCTATTATTTTATTAGCGAGTGTCAATATGTATTCACAATTTTAAAGTCAATGATAATTAGATATCTAGAATCGAAGTAGTAAAATGCTGTGTTTAGAAAGAGGACAGTTTTTGTTTAGACAAAACATAGAGAAGCGTAGAAATGAGAGCAGGAGAAAATCACTGTGATAAGAAAAACCAATGAACAAAGGAATGGTCAACGCTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD125909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCAGGAGAAAATCACTGTGATAAGAAAAACCAATGAACAAAGGAATGGTCAACGCTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGGGATATATATAGAGATAGATGGATAAATAAATAAAGATTCTTTGATGGAGTATATAGTTGATTTTTACAGAGAAAAAAAAATGTCAC AACCAAAAGAGAAACATACATATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD096009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATAAGAAAAACCAATGAACAAAGGAATGGTCAACGCTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGGGATATATATAGAGATAGATGGATAAATAAATAAAGATTCTTTGATGGAGTATATAGTTGATTTTTACAGAGAAAAAAAAATGTCACAAACCAAAAGAGAAACATACATATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGGATGAATAAGGTTTAATGATCATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTGNTGCCTTTTA                                                                                                                                                                                                      ]
[-] EMBL CD140517             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACATATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTACCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGT                                                                                                                      ]
[+] EMBL CD196909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTAT                                                                                                                                                                                                                  ]
[-] EMBL CD140525             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGCGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACGAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGT                                                                                                                      ]
[-] EMBL CD140356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATAAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAGTACAATCAATCCAACTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGT                                                                                                                      ]
[-] EMBL CD196898             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTGCAAAAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGT                                                                                                                      ]
[-] EMBL CD196814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAATAACGAGAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGT                                                                                                                      ]
[+] EMBL CD200792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ctagtgatTATTGTCGATGAAAAAACGAAAATTTGTAGCGATTTTATTGTGTACATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGTGATATTCCTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAAGCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGAACACGATGTTGC]




>consensus_9870#0
ACATATTTATTATTAGGACTAGGATGTGAGGAGCGCAAAGGCTTCGTGGGTGTGAATAAA
CATATGTTAAATAGAACGCTGAAATAATAGAAAATATGGTAATGAATAGGAAATCAAAAC
ATAAAACTTAGGCACAATCATCCAATCAGTGCAAGTATACAAAATACAACTAGTTACATA
ATGACATAAGCTTTACTCCGAGTTTTTCCATAAAATATACAATACACAGCTCATATGTAC
ATATTACGTGATACATGAAAGATAGACAAATGGAAAATTACTACCAAAGTATCTATATCT
CTAATAATATAATGAATATGTAAACAGTCACACATACACATGCAAAACATGGATTATGTG
ACAAGTGCTATTTCATTAAAAGTTCAATAGAAACCATATCTATTATTTTATTAGCGAGTG
TCAATATGTATTCACAATTTTAAAGTCAATGATAATTAGATATCTAGAATCGAAGTAGTA
AAATGCTGTGTTTAGAAAGAGGACAGTTTTTGTTTAGACAAAACATAGAGAAGCGTAGAA
ATGAGAGCAGGAGAAAATCACTGTGATAAGAAAAACCAATGAACAAAGGAATGGTCAACG
CTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGGGAT
ATATATAGAGATAGATGGATAAATAAATAAAGATTCTTTGATGGAGTATATAGTTGATTT
TTACAGAGAAAAAAAAATGTCACAACCAAAAGAGAAACATACATATTGCAAAAATAACGA
GAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACT
ATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTC
TACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGG
GATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTT
TATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACA
ATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAA
CATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGTGATATTC
CTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAA
GCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGAACACGATGTTGC

consensusID : consensus_9870#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence

                              [AAGCAATGAAGTTAAATGATAACGATGGAGGGGATATTTATTATGTCGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAANNNNNNNNNNNNNNNNNNNNNNNGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTAATCATCATCATCTGTGATATTCCTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAAGCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGANNNNNNNNNNNNNNNNNNNNNNCCAGTAACATTACCAGTACCACCACTGACAATTCTTAGTTCATCCTCTATAGGCCTATAAGACTGAAGCTGTAAAAACACAAAATGAACAAAAATATGATATTATCTTACCCCTC]

[-] EMBL CD081001             [AAGCAATGAAGTTAAATGATAACGATGGAGGGGATATTTATTATGTCGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAANNNNNNNNNNNNNNNNNNNNNNNGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTAATCATCATCATCTGTGATATTCCTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAAGCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGANNNNNNNNNNNNNNNNNNNNNNCCAGTAACATTACCAGTACCACCACTGACAATTCTTAGTTCATCCTCTATAGGCCTATAAGACTGAAGCTGTAAAAACACAAAATGAACAAAAATATGATATTATCTTACCCCTC]




>consensus_9870#1
AAGCAATGAAGTTAAATGATAACGATGGAGGGGATATTTATTATGTCGATGATGGTGTAT
GTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTG
GGAAAAATACAATTTTAGAGAACAAGGGATGGGGTGGGCGATATAATTACATATTGTCGA
TGAAAAAANNNNNNNNNNNNNNNNNNNNNNNGTGTTCATTGATTACTCCCACTTTTTGAT
ACAAATATTGTGAACAAATAAAATACAATCAATCCATCTCACTATTATTATTGCCTTTTA
ATTTCTTTAAAAAGGAATACGCATAAACATGTTAGGTACTAATCATCATCATCTGTGATA
TTCCTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAA
CAAGCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGANNNNNNNNNNNNNNNNNN
NNNNCCAGTAACATTACCAGTACCACCACTGACAATTCTTAGTTCATCCTCTATAGGCCT
ATAAGACTGAAGCTGTAAAAACACAAAATGAACAAAAATATGATATTATCTTACCCCTC

consensusID : consensus_9870#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 265
fasta sequence

                              [AGACTGGAAAACCCTGGCGGGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAANTTTAGAGAACAAGGGATGGGGTGGGCGATATAACTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTNTTGATACAAATATTGTGAACAAATAAAAT]

[+] EMBL CD059323             [AGACTGGAAAACCCTGGCGGGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAANTTTAGAGAACAAGGGATGGGGTGGGCGATATAACTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTNTTGATACAAATATTGTGAACAAATAAAAT]




>consensus_9870#2
AGACTGGAAAACCCTGGCGGGAAAGACTATGAATGAATAAGGTTTAATGATGATGGTGTA
TGTTGTGTTGTGGGTTTTTATATCTGTCTACATATTTGCCTTGCATTCATTCCATAATGT
GGGAAAAATACAANTTTAGAGAACAAGGGATGGGGTGGGCGATATAACTACATATTGTCG
ATGAAAAAACGAGAATTTGTAGCGATTTTATTGTGTTCATTGATTACTCCCACTTNTTGA
TACAAATATTGTGAACAAATAAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9870#0      ACATATTTATTATTAGGACTAGGATGTGAGGAGCGCAAAGGCTTCGTGGGTGTGAATAAA 60
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      CATATGTTAAATAGAACGCTGAAATAATAGAAAATATGGTAATGAATAGGAAATCAAAAC 120
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ATAAAACTTAGGCACAATCATCCAATCAGTGCAAGTATACAAAATACAACTAGTTACATA 180
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ATGACATAAGCTTTACTCCGAGTTTTTCCATAAAATATACAATACACAGCTCATATGTAC 240
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ATATTACGTGATACATGAAAGATAGACAAATGGAAAATTACTACCAAAGTATCTATATCT 300
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      CTAATAATATAATGAATATGTAAACAGTCACACATACACATGCAAAACATGGATTATGTG 360
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ACAAGTGCTATTTCATTAAAAGTTCAATAGAAACCATATCTATTATTTTATTAGCGAGTG 420
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      TCAATATGTATTCACAATTTTAAAGTCAATGATAATTAGATATCTAGAATCGAAGTAGTA 480
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      AAATGCTGTGTTTAGAAAGAGGACAGTTTTTGTTTAGACAAAACATAGAGAAGCGTAGAA 540
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ATGAGAGCAGGAGAAAATCACTGTGATAAGAAAAACCAATGAACAAAGGAATGGTCAACG 600
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      CTATTGTTGTATGAATGAAATCAAGTTCCACCTTTGCACTGAGTTTAGGTAGAATGGGAT 660
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      ATATATAGAGATAGATGGATAAATAAATAAAGATTCTTTGATGGAGTATATAGTTGATTT 720
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      TTACAGAGAAAAAAAAATGTCACAACCAAAAGAGAAACATACATATTGCAAAAATAACGA 780
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ------------------------------------------------------------
                                                                                  

consensus_9870#0      GAAAAGCAATGAAGTTAAATGATAACGATTGGAGGGATTATTATTATGTCGCGAAAGACT 840
consensus_9870#2      --------------------------------AGACTGGAAAACCCTGGCGGGAAAGACT 28
consensus_9870#1      --------------------------------AAGCAATGAAGTTA-AATGATAACGATG 27
                                                      *                 *  ** **  

consensus_9870#0      ATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTC 900
consensus_9870#2      ATGAATGAATAAGGTTTAATGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTC 88
consensus_9870#1      GAGGGGATATTTATTATGTCGATGATGGTGTATGTTGTGTTGTGGGTTTTTATATCTGTC 87
                        *     **    * *   ****************************************

consensus_9870#0      TACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGG 960
consensus_9870#2      TACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAANTTTAGAGAACAAGG 148
consensus_9870#1      TACATATTTGCCTTGCATTCATTCCATAATGTGGGAAAAATACAATTTTAGAGAACAAGG 147
                      ********************************************* **************

consensus_9870#0      GATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTT 1020
consensus_9870#2      GATGGGGTGGGCGATATAACTACATATTGTCGATGAAAAAACGAGAATTTGTAGCGATTT 208
consensus_9870#1      GATGGGGTGGGCGATATAATTACATATTGTCGATGAAAAAANNNNNNNNNNNNNNNNNNN 207
                      ******************* *********************                   

consensus_9870#0      TATTGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACA 1080
consensus_9870#2      TATTGTGTTCATTGATTACTCCCACTTNTTGATACAAATATTGTGAACAAATAAAAT--- 265
consensus_9870#1      NNNNGTGTTCATTGATTACTCCCACTTTTTGATACAAATATTGTGAACAAATAAAATACA 267
                          *********************** *****************************   

consensus_9870#0      ATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAA 1140
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      ATCAATCCATCTCACTATTATTATTGCCTTTTAATTTCTTTAAAAAGGAATACGCATAAA 327
                                                                                  

consensus_9870#0      CATGTTAGGTACTATTTCACTATCAATAATCATGGTTAATCATCATCATCTGTGATATTC 1200
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      CATGTTAGGTACTA------------------------ATCATCATCATCTGTGATATTC 363
                                                                                  

consensus_9870#0      CTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAA 1260
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      CTCTCATGTGTTTGTTGATGTTGTTGTGAAATCAATGCCTGCTTTATTTCTTCTAAACAA 423
                                                                                  

consensus_9870#0      GCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGAACACGATGTTGC--------- 1311
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      GCTGGTGGACTGCAGATTCCATATTTTCGTCTGGCTAGANNNNNNNNNNNNNNNNNNNNN 483
                                                                                  

consensus_9870#0      ------------------------------------------------------------
consensus_9870#2      ------------------------------------------------------------
consensus_9870#1      NCCAGTAACATTACCAGTACCACCACTGACAATTCTTAGTTCATCCTCTATAGGCCTATA 543
                                                                                  

consensus_9870#0      --------------------------------------------------------
consensus_9870#2      --------------------------------------------------------
consensus_9870#1      AGACTGAAGCTGTAAAAACACAAAATGAACAAAAATATGATATTATCTTACCCCTC 599