These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9901#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1245 fasta sequence [AAAATGCTCTTTTTCTATTGGGTTATGTATAATTATTTAAGAAGATTCATTTTGAATCATCATACTTAAACTAGATTGTACAGTACCAAGATGAGATCGCCATTGTACCAATGTATCATGTAAGTTAACCCATTGAGGTCGACCAAATGTACGTGGAAATGCTCCAGTTATTAGAATTTTCTTTTGAACTTGATCTAATTT-ACATGCGACAGCTCTCTGGCGTACAGCTTCTATTATAAATGGTTCCAGTTCTTCAATCTTGAGATTCAACTGAGCAGCTGCATCTTGATAACTAAGTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGATGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCATTATAGGTTGAAAGGAAATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATTGAAATATGTGCATCATACAACTTTTGCCACACTTTCTGGCATTCCTCAACTGTGCAATCACATTCACTTAGCCAAGAAGCAACCTTCTTTGGTGCAGTTATTACTTCGTTCAGAACACCCATTTTTTCTGCACATTCAGTTAGAATGAGATATATTTCATAACGGGGATGACTTTTAGGATTCAGTCCACAAAACAAAAGGTTCAGCGGGAAAAGTTTGCTTCTATGTCTTCGCGTGTTATCACCAGAAAAATCAAGTAACTTTTCGCAAAAAAGATGAACCGCATCAATTAATTTGTCAGGTGGAAGTTGGATAAAAATGGAGGCAACACTTGCCAAGACATCATTCACATCAGCTTCAGCAATAGTTTCGTCTTTCCAACAGATGTCAATGTATTTAAGGCATTTAATTAGCTCGTCTGGCCAGTTAGTATCTGTACACTCAGTACTATCTAGCACTTTGGCCCCATAACTCTTAAGAAATCGTTTTAACTCAGTAACTTGTTTAGCATCTGTGCCATCGATAAAAACAGCTACGCTCATAGCGCGTGAGCTAAGTAACACCAGTGTTAAATTAGGCGCTTAATAATACACTAT] [+] EMBL AI975925 [AAAATGCTCTTTTTCTATTGGGTTATGTATAATTATTTAAGAAGATTCATTTTGAATCATCATACTTAAACTAGATTGTACAGTACCAAGATGAGATCGCCATTGTACCAATGTATCATGTAAGTTAACCCATTGAGGTCGACCAAATGTACGTGGAAATGCTCCAGTTATTAGAATTTTCTTTTGAACTTGATCTAATTT ACATGCGACAGCTCTCTGGCGTACAGCTTGTATTATAAATGGTTCCAGTTCTTCAATCTTGAGATTCAACTGAGCACCTGCATCTTGATAACTAAGTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGCTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGCTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAG ] [-] EMBL AA559634 [ TTGATCTAATTTAACATGCGACAGCTNTCTGGCGTACAGCTTCTATTATAAATGGTTCCAGTTCTTCAATCTTGAGATTCAACTGAGCAGCTGCATCTTGATAACTAAGTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGGATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTG ] [+] EMBL CD187422 [ TTCTATTATAAATGGTTCCAGTTCTTCAATCTTGAGATTCAACTGAGCAGCTGCATCTTGATAACTAAGTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTCGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGGTGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCATTATAGGTTGAAAGGAAATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATT ] [+] EMBL CD190387 [ GATTCAACTGAGCAGCTGCATCTTGATAACTAAGTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGATGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCATTATAGGTTGAAAGGAAATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATTGAAATATGTGCATCATACAACTTTTGCCACACTTTCTGGCATTCCTCAACCGTGCAATCACAT ] [+] EMBL CD165495 [ GTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGATGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCATTATAGGTTGAAAGGAGATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATTGAAATATGTGCATCATACAACTTTTGCCACACTTTCTGGCATTCCTCAACTGTGCAATCACAT ] [+] EMBL CD165496 [ GTTCATTCACATTCTCAGACAACTGCATTAGCGTCAGAAGTCGGAGTTTGTGAATACAAGCTTCTTCAGATAGATTATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGATGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCATTATAGGTTGAAAGGAGATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATTGAAATATGTGCATCATACAACTTTTGCCACACTTTCTGGCATTCCTCAACTGTGCAATCACAT ] [+] EMBL CD165427 [ TATTTTGATTTAAAAAGTTTGGATGTTTAGTCAGGAAGTTTCTGAATGTATTCAGATCTCCAGAGACAAATATCTTGAAGAAATCATGGACAGGTTCACCTTCCAGGTATTGAACTGGTTTGAGAGCGTACAATTGATCATGCGATAATAAAGATGGATCTTGCAACACAGATATGATACATTTTATTGCATTTTGTCTGGCATCCATAGCAGTTAGTTCGTTATAGGTTGAAAGGAAATATATCATTGCTTCAATAGCTTTTCG ] [-] EMBL CD112846 [ CCATAGCAGTTAGTTCATTATAGGTTGAAAGGAAATATATCATTGCTTCAATAGCTTTTCGACTTTCACCCATTGAAATATGTGCATCATACAACTTTTGCCACACTTTCTGGCATTCCTCAACTGTGCAATCACATTCACTTAGCCAAGAAGCAACCTTCTTTGGTGCAGTTATTACTTCGTTCAGAACACCCATTTTTTCTGCACATTCAGTTAGAATGAGATATATTTCATAACGGGGATGACTTTTAGGATTCAGTCCACAAAACAAAAGGTTCAGCGGGAAAAGTTTGCTTCTATGTCTTCGCGTGTTATCACCAGAAAAATCAAGTAACTTTTCGCAAAAAAGATGAACCGCATCAATTAATTTGTCAGGTGGAAGTTGGATAAAAATG ] [-] EMBL CD187591 [ AGATATATTTCATAACGGGGATGACTTTTAGGATTCAGTCCACAAAACAAAAGGTTCAGCGGGAAAAGTTTGCTTCTATGTCTTCGCGTGTTATCACCAGAAAAATCAAGTAACTTTTCGCAAAAAAGATGAACCGCATCAATTAATTTGTCAGGTGGAAGTTGGATAAAAATGGAGGCAACACTTGCCAAGACATCATTCACATCAGCTTCAGCAATAGTTTCGTCTTTCCAACAGATGTCAATGTATTTAAGGCATTTAATTAGCTCGTCTGGCCAGTTAGTATCTGTACACTCAGTACTATCTAGCACTTTGGCCCCATAACTCTTAAGAAATCGTTTTAACTCAGTAACTTGTTTAGCATCTGTGCCATCGATAAAAACAGCTACGCTCATAGCGCGTGAGCTAAGTAACACCAGTGTTAAATTAGGCGCTTAATAATACACTAT] [-] EMBL BF936339 [ AACAAAAGGTTCAGCGGGAAAAGTTTGCTTCTATGTCTTCGCGTGTTATCACCAGAAAAATCAAGTAACTTTTCGCAAAAAAGATGAACCGCATCAATTAATTTGTCAGGTGGAAGTTGGATAAAAATGGAGGCAACACTTGCCAAGACATCATTCACATCAGCTTCAGCAATAGTTTCGTCTTTCCAACAGATGTCAATGTATTTAAGGCATTTAATTAGCTCGTCTGGCCAGTTAGTATCTGTACACTCAGTACTATCTAGCACTTTGGCCCCATAACTCTTAAGAAATCGTTTTAACTCAGTAACTTGTTTAGCATCTGT ] [-] EMBL CD162851 [ TAACTTTTCGCAAAAAAGATGAACCGCATCAATTAATTTGTCAGGTGGAAGTTGGATAAAAATGGAGGCAACACTTGCCAAGACATCATTCACATCAGCTTCAGCAATAGTTTCGTCTTTCCAACAGATGTCAATGTATTTAAGGCATTTAATTAGCTCGTCTGGCCAGTTAGTATCTGTACACTCAGTACTATCTAGCACTTTGGCCCCATAACTCTTAAGAAATCGTTTTAACTCAGTAACTTGTTTAGCATCTGTGCCATCGATAAAAACAGCTACGCTCATAGCGCGTGAGCTAAGTAACACCAGTGTTAAATTAGGCGCT ] [-] EMBL CD187787 [ AGGCAACACTTGCCAAGACATCATTCACATCAGCTTCAGCAATAGTTTCGTCTCTCCAACAGATGTCAATGTATTTAAGGCATTTAATTAGCTCGTCTGGCCAGTTAGTATCTGTACACTCAGTACTATCTAGCACTTTGGCCCCATAACTCTTAAGAAATCGTTTTAACTCAGTAACTTG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||