Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9915 cluster # 9915       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9915#0 length = 1578 sequences # 9  
consensus_9915#1 length = 621 sequences # 2  
consensus_9915#2 length = 354 sequences # 1  

consensusID : consensus_9915#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1578
fasta sequence
                              [TTGATTGCTGAATAATTTAAGCCACTGAAAATCCCAGCGAGTGATTATCACCTTATTCTCGACCTATCACTGATACGTACATGTGAGTATGACCCAATAAGCGAGAATCAAGTAGAAGTAGATGCACCAATGTATTCGTATATTATTCGTTCATTTTCGAGGTTTTTCACTTACTTTAAGCGCTTCCATCAATTTTTGTGTTGGCGCTTGTTTAAAATGAGGTGGAATTCATTTTTCGCAACCCGCCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGACGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGG-TAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAAATATGTTAAA-TATTACAAGCTACTAAGTACTAAGTATATTCCCATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCATATTGATTATCACGTCATTATTATCATTGTTACCATAACCTCAGTTCTGTACACATCTATTTTCTATATGGTATTTCCTATATTCTCCCCATGCTTGTCTGTAAATATTTATTACGACTTGAAACTTTTTCCCATGAAGTTGAATCTTTTGTTTTAACTTTACTGTCTTTATATTTAACGAATACTAATTGATCCTAAATTTACAACAAAGAATAAATACACTCGGTTTTCTTTTTTATTAGAAGGAAATATTTTTTCGAAATAAAAAAAAAAAAAAAAAA]

[+] EMBL SMBNUCFAC            [TTGATTGCTGAATAATTTAAGCCACTGAAAATCCCAGCGAGTGATTATCACCTTATTCTCGACCTATCACTGATACGTACATGTGAGTATGACCCAATAAGCGAGAATCAAGTAGAAGTAGATGCACCAATGTATTCGTATATTATTCGTTCATTTTCGAGGTTTTTCACTTACTTTAAGCGCTTCCATCAATTTTTGTGTTGGCGCTTGTTTAAAATGAGGTGGAATTCATTTTTCGCAACCCGCCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGACGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGG TAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAAATATGTTAAA TATTACAAGCTACTAAGTACTAAGTATATTCCCATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCATATTGATTATCACGTCATTATTATCATTGTTACCATAACCTCAGTTCTGTACACATCTATTTTCTATATGGTATTTCCTATATTCTCCCCATGCTTGTCTGTAAATATTTATTACGACTTGAAACTTTTTCCCATGAAGTTGAATCTTTTGTTTTAACTTTACTGTCTTTATATTTAACGAATACTAATTGATCCTAAATTTACAACAAAGAATAAATACACTCGGTTTTCTTTTTTATTAGAAGGAAA                                ]
[-] EMBL CD091600             [                        CTGAAAATCCCAGCGAGTGATTATCACCTTATTCTCGACCTATCACTGATACGTACATGTGAGTATGACCCAATAAGCGAGAATCAAGTAGAAGTAGATGCACCAATGTATTCGTATATTATTCGTTCATTTTCGAGGTTTTTCACTTACTTTAAGCGCTTCCATCAATTTTTGTGTTGGCGCTTG TTAAAATGAGGTGGAATTCATTTTTCGCAACCCGCCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGACGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGG TAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCGTGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD074184             [                                                                                                                                                                                                                                                     CCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGACGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGG TAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD080080             [                                                                                                                                                                                                                                                     CCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGACGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGGCCCCCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD078124             [                                                                                                                                                                                                                                                                                               ttcGGCACGAG GGTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTATTCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTACGTTCGCTGTTCAGGCTAGCGATGG TAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAAC ATTACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD194189             [                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTCGCTGTTCAGGCTAGCGATGG TAGCCTGATCCCCGTTCAACTAGCTACGTCTGCTGGTGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGGCGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTTAACAATTACAGCAGTCTTCACAAGTCCAAGTTATCCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BG930622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGGTCATCATGTTCCTTCCAAGTGCAGCTCGGCAACCAATATACACAACTCAACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGATAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD111946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCNCAAGGGCAGATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTCACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AI395340             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCCCCGTACTTGGATATTAAAATATGTTAAATTATTCCAAGCTACTAAGTACTAAGTATATTCACATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCATATTGATTATCACGTCATTATTATCATTGTTACCATAACCTCAGTTCTGTACACATCTATTTTCTATATGGTATTTCCTATATTCTCCCCATGCTTGTCTGTAAATATTTATTACGACTTGAAACTTTTTCCCATGAAGTTGAATCTTTTGTTTTAACTTTACTGTCTTTATATTT ACG ATACTAA TGAT CT AATTTAC ACAAAG ATAAATACACTCGTTTTTCTTTTTTATTAGAAGGAAATATTTTTTCGAAATAAAAAAAAAAAAAAAAAA]


>consensus_9915#0 TTGATTGCTGAATAATTTAAGCCACTGAAAATCCCAGCGAGTGATTATCACCTTATTCTC GACCTATCACTGATACGTACATGTGAGTATGACCCAATAAGCGAGAATCAAGTAGAAGTA GATGCACCAATGTATTCGTATATTATTCGTTCATTTTCGAGGTTTTTCACTTACTTTAAG CGCTTCCATCAATTTTTGTGTTGGCGCTTGTTTAAAATGAGGTGGAATTCATTTTTCGCA ACCCGCCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGAC GTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTAT TCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTAC GTTCGCTGTTCAGGCTAGCGATGGTAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGG TGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCA ACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCA GATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTC ACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCA AGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCAC ACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGT TAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGCGAAATTAGAAGC ACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGC TATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGC AAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAAC AAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAAT TTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAA AATATGTTAAATATTACAAGCTACTAAGTACTAAGTATATTCCCATTATTGCCTGGATAA ACATTGGTAATGATTATGTGACTTTTGGAGATGCCCATATTGATTATCACGTCATTATTA TCATTGTTACCATAACCTCAGTTCTGTACACATCTATTTTCTATATGGTATTTCCTATAT TCTCCCCATGCTTGTCTGTAAATATTTATTACGACTTGAAACTTTTTCCCATGAAGTTGA ATCTTTTGTTTTAACTTTACTGTCTTTATATTTAACGAATACTAATTGATCCTAAATTTA CAACAAAGAATAAATACACTCGGTTTTCTTTTTTATTAGAAGGAAATATTTTTTCGAAAT AAAAAAAAAAAAAAAAAA



consensusID : consensus_9915#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 621
fasta sequence
                              [TCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAAATATGTTAAATTATTACAAGCTACTAAGTACTAAGTATATTCACATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCCTCGTGCCGAATNCTTGGCTCGA]

[-] EMBL CD080266             [TCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAAATATGTTAAATTATTACAAGCTACTAAGTACTAAGTATATTCACATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCCTCGTGCCGAATNCTTGGCTCGA]
[+] EMBL BG932616             [                                                                                                                                                                                GCCAAGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACT                                                                                                                                                                                                                                                                                               ]


>consensus_9915#1 TCAAGCCGTTTCAAACACTCAAGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTAT AGGTCAGCAGGGAATGTCCACACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGG CGGCGAAGAACCTCTTTATGTTAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCA AGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCA TGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTC TGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATC AGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATA TCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGA TCCACCGTACTTAGATATTAAAATATGTTAAATTATTACAAGCTACTAAGTACTAAGTAT ATTCACATTATTGCCTGGATAAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCCT CGTGCCGAATNCTTGGCTCGA



consensusID : consensus_9915#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence
                              [CGGCACGAGGGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAATATGTTAATTATTTACAGCTACT]

[+] EMBL CD077490             [CGGCACGAGGGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTAAATATGTTAATTATTTACAGCTACT]


>consensus_9915#2 CGGCACGAGGGCACGAGCGAAATTAGAAGCACAAGGTCGCATTCCGAAGGAAAGACGGAA GTATCTTCATGAGTCCAGGCATAAGCATGCTATGAACCGCATACGAAGTTCTGGTGGTCG GTTCTTTTCTGTACCGTCTTATTCTGATGCAAATAACAGTACTGCCTCGACCTCTTCCAG TAATTCATCAGCGATAACATCCTTCCAAACAAATGAGGACTGTAAAACTAAGATTTTGTC TAACTGATATCCTAATTGTACGCTGTTAATTTCCTCATGGATTCAACTTGTTGACAATCC GGAAAACGATCCACCGTACTTAGATATTAAATATGTTAATTATTTACAGCTACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9915#0      TTGATTGCTGAATAATTTAAGCCACTGAAAATCCCAGCGAGTGATTATCACCTTATTCTC 60
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GACCTATCACTGATACGTACATGTGAGTATGACCCAATAAGCGAGAATCAAGTAGAAGTA 120
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GATGCACCAATGTATTCGTATATTATTCGTTCATTTTCGAGGTTTTTCACTTACTTTAAG 180
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      CGCTTCCATCAATTTTTGTGTTGGCGCTTGTTTAAAATGAGGTGGAATTCATTTTTCGCA 240
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ACCCGCCCAAAAGAGTTGGTTCCGGAATTTACGTATTTGGAGTATATCTTGGAACTAGAC 300
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GTTTTCTGTAATGATGGACGGTTATATACACGCTGGTCAAGTCCTTCCGGCCCAAACTAT 360
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      TCTACAGCCGTTGCAACAGCCTTTGATAATGGATGCAAACGGTGCCGCTCAACCAACTAC 420
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GTTCGCTGTTCAGGCTAGCGATGGTAGCCTGATTCCCGTTCAACTAGCTACGTCTGCTGG 480
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      TGGGGGTCAGGTCATCATGTTCCTTCCAAGTGCAGCTCAGCAAACAATATACACAACTCA 540
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ACCTATAGTGTCTGCTGCAACCACTTCTTTAGACGCTAACCTTACATCGGCCCAAGGGCA 600
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GATTATAGGGACAACTGTTGAAGACGAAACTCACATACTTCAACAATTACAGCAGTCTTC 660
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ACAAGTCCAAGTTATTCACCAGACCCAGTCTGGATTATCTCAAGCCGTTTCAAACACTCA 720
consensus_9915#1      ---------------------------------------TCAAGCCGTTTCAAACACTCA 21
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      AGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCAC 780
consensus_9915#1      AGTTGTTCAGGTTTCTAGTCCGCAACCCGAAACTGCTATAGGTCAGCAGGGAATGTCCAC 81
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGT 840
consensus_9915#1      ACAAGCATCCTCAACAATATCACCTGGTCTTACTCCTGGCGGCGAAGAACCTCTTTATGT 141
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      TAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAG-CACGAGCGAAATTAGAAG 899
consensus_9915#1      TAATGCTAAACAGTACCACAGAATTCTAAAACGTCGCCAAG-CACGAGCGAAATTAGAAG 200
consensus_9915#2      -------------------------------CGGCACGAGGGCACGAGCGAAATTAGAAG 29
                                                     ** * * * * ******************

consensus_9915#0      CACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATG 959
consensus_9915#1      CACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATG 260
consensus_9915#2      CACAAGGTCGCATTCCGAAGGAAAGACGGAAGTATCTTCATGAGTCCAGGCATAAGCATG 89
                      ************************************************************

consensus_9915#0      CTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATG 1019
consensus_9915#1      CTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATG 320
consensus_9915#2      CTATGAACCGCATACGAAGTTCTGGTGGTCGGTTCTTTTCTGTACCGTCTTATTCTGATG 149
                      ************************************************************

consensus_9915#0      CAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAA 1079
consensus_9915#1      CAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAA 380
consensus_9915#2      CAAATAACAGTACTGCCTCGACCTCTTCCAGTAATTCATCAGCGATAACATCCTTCCAAA 209
                      ************************************************************

consensus_9915#0      CAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAA 1139
consensus_9915#1      CAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAA 440
consensus_9915#2      CAAATGAGGACTGTAAAACTAAGATTTTGTCTAACTGATATCCTAATTGTACGCTGTTAA 269
                      ************************************************************

consensus_9915#0      TTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTA 1199
consensus_9915#1      TTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTA 500
consensus_9915#2      TTTCCTCATGGATTCAACTTGTTGACAATCCGGAAAACGATCCACCGTACTTAGATATTA 329
                      ************************************************************

consensus_9915#0      AAATATGTTAAAT-ATTACAAGCTACTAAGTACTAAGTATATTCCCATTATTGCCTGGAT 1258
consensus_9915#1      AAATATGTTAAATTATTACAAGCTACTAAGTACTAAGTATATTCACATTATTGCCTGGAT 560
consensus_9915#2      AA-TATGTTAATTATTTACA-GCTACT--------------------------------- 354
                      ** ******** *  ***** ******                                 

consensus_9915#0      AAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCATATTGATTATCACGTCATTAT 1318
consensus_9915#1      AAACATTGGTAATGATTATGTGACTTTTGGAGATGCCCCTCGTGCCGAATNCTTGGCTCG 620
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      TATCATTGTTACCATAACCTCAGTTCTGTACACATCTATTTTCTATATGGTATTTCCTAT 1378
consensus_9915#1      A----------------------------------------------------------- 621
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ATTCTCCCCATGCTTGTCTGTAAATATTTATTACGACTTGAAACTTTTTCCCATGAAGTT 1438
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      GAATCTTTTGTTTTAACTTTACTGTCTTTATATTTAACGAATACTAATTGATCCTAAATT 1498
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      TACAACAAAGAATAAATACACTCGGTTTTCTTTTTTATTAGAAGGAAATATTTTTTCGAA 1558
consensus_9915#1      ------------------------------------------------------------
consensus_9915#2      ------------------------------------------------------------
                                                                                  

consensus_9915#0      ATAAAAAAAAAAAAAAAAAA 1578
consensus_9915#1      --------------------
consensus_9915#2      --------------------
                                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)