cluster # 9964

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Schistosoma mansoni
cluster # 9964 cluster # 9964 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9964#0 length = 1125 sequences # 9

consensus_9964#1 length = 469 sequences # 2
consensus_9964#2 length = 253 sequences # 1

consensusID : consensus_9964#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1125
fasta sequence

                              [CCATTAATTCGGCACGAGCGCGCTTNATTGAAAATGAATGTAGTAGGTGAATATAT-AGACT-GGATGAACA-GGATTTTTAAAATAAGCATGGAAAGAGCAGATCCCAGAGTCTCTTCGTTGCTTCTAATGAGTTCAGTT-AATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTCTATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTTACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTCGCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAACGCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGATAGAATGTTTAGATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGG-ACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATANATCG-AAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATANACATTCAAACAAATGGAAATCTTTAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACANTATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTT-ACAGTAAC-AAAT-AAAACAAG-ATGTG-ATACA-TTNATATCATTAAA---TTTCC-TG-TAT-ATAG-ATCATAACTAGNGAAATCTACTCTCCATGATTATAATAGATCATCTAATGATCTCTTTTGTTATTGAAAGAA]

[+] EMBL CD081658             [CCATTAATTCGGCACGAGCGCGCTTNATTGAAAATGAATGTAGTAGGTGAATATAT AGACT GGATGAACA GGATTTTTAAAATAAGCATGGAAAGAGCAGATCCCAGAGTCTCTTCGTTGCTTCTAATGAGTTCAGTT AATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTCTATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTTACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTCGCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAACGCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGATAGAATGTTTAGATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGG ACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATANATCG AAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATANACATTCAAACAAATGGAAATCTTTAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACANTATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTT ACAGTAAC AAAT AAAACAAG ATGTG ATACA TTNATATCATTAAA   TTTCC TG TAT ATAG ATCATAACTAGNGAAATCTACTCTCCATGATTATAATAGATCATCTAATGATCTCTTTTGTTATTGAAAGAA]
[+] EMBL CD077398             [                        ggcacgaggATGAATGTAGTAGGTGAATATAT AGACT GGATGAACA GGATTTTTAAAATAAGCATGGAAAGAGCAGATCCCAGAGTCTCTTCGTTGCTTCTAATGAGTTCAGTT AATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTCTATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTTACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTCGCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAACGCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGATAGAATGTTTAGATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD083238             [                                                   TATATNAGACTGGGATGAACAGGGATTTTTAAATTAAGCATGGAAAGAGCACATCCCAGAGTCTCTTCGTTGCTTCTAATGAGTTCAGTT AATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTCTATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTTACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTCGCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAACGCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGATAGAATGTTTAGATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGGNACCT AATGGAGAAAATACTTATGGTGGAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD077389             [                                                                                                                                  TGAGTTCATTTGAATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTCTATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTGTTTACGTATGATTGGATTATGGTAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD178240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGAAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGG ACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACGAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATAAATCGAAAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATAAACATTCAAACAAATGGAAATCTTAAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACAATATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTTCACAGTAACAAAATAAAAACAAGAATGTGTATACATTTCATATCATTAAATTTTTTCCATGTTATAATAGAATCATtatatt                                                             ]
[+] EMBL CD069156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGG ACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCA                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD165784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGG ACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATG                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD136350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAACTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATC                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD136406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAACTTTTTATTCCTTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATC                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_9964#0
CCATTAATTCGGCACGAGCGCGCTTNATTGAAAATGAATGTAGTAGGTGAATATATAGAC
TGGATGAACAGGATTTTTAAAATAAGCATGGAAAGAGCAGATCCCAGAGTCTCTTCGTTG
CTTCTAATGAGTTCAGTTAATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTC
TATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTT
ACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTC
GCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAAC
GCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGATAGAATGTTTA
GATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTCACATGGTTACATGTCTAT
CATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAA
TTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCA
TTTGCGGCTCTTGGACCTAAATGGAGAAAATACTTATGGTGGAAACGTTACTTGACAATG
CTACAAATGATTCAATTTACCTATGGAATTTTTTATTCCTTCATTTCACTTTACAAGCAA
TGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTA
CTTTTCTATAATCACTATCATCATGCATATCATANATCGAAAAGCAAAATTTATGTAAAG
CAACTGATCACAGTTCAATANACATTCAAACAAATGGAAATCTTTAAAAACATGAATGAG
TTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACANTATATTGAATATATTATA
AAAAAATATATGGAGAAAAAGTATATATTTTTTTTACAGTAACAAATAAAACAAGATGTG
ATACATTNATATCATTAAATTTCCTGTATATAGATCATAACTAGNGAAATCTACTCTCCA
TGATTATAATAGATCATCTAATGATCTCTTTTGTTATTGAAAGAA

consensusID : consensus_9964#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 469
fasta sequence

                              [TTTCTCCCCATTACTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATAAATCGAAAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATAAACATTCAAACAAATGGAAATCTTAAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACAATATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTTCACAGTAACAAAATAAAAACAAGAATGTGTATACATTTCATATCATTAAATTTTTCCATGTTATAATAGAATCATTAAACTAGTGAAATATCATACTCTTCCATTGATATATAAATTAGTATCATTCTAAATGTATCTTCTTTTTGTTTATATGTAATAGTAAATATTT]

[-] EMBL CD076773             [TTTCTCCCCATTACTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATAAATCGAAAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATAAACATTCAAACAAATGGAAATCTTAAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGACAATATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTTCACAGTAACAAAATAAAAACAAGAATGTGTATACATTTCATATCATTAAATTTTTCCATGTTATAATAGAATCATTAAACTAGTGAAATATCATACTCTTCCATTGATATATAAATTAGTATCATTCTAAATGTATCTTCTTTTTGTTTATATGTAATAGTAAATAT  ]
[-] EMBL CD076809             [                                                      AATGTATTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCCCTATCATCAGGCATATCATAAATCGAAAAAGCAAAATTTATGTAAAGCAACTGATCCCAGTTCAATAAACATTCAAACAAATGGAAATTTTAAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGCCAATATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTTCCCAGTAACAAAATAAAAACAAGAAGGGGTATACATTTCATATCATTAAATTTTTCCATGTTATAATAGAATCATTAAACTAGTGAAATATCATACTTTTCCATTGATATATAAATTAGTATCATTTTAAAGGGATTTTTTTTTTGTTTATATGTAATAGTAAATATTT]




>consensus_9964#1
TTTCTCCCCATTACTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTA
TTTTATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATAAA
TCGAAAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATAAACATTCAAACAAAT
GGAAATCTTAAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTA
CTGACAATATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTT
CACAGTAACAAAATAAAAACAAGAATGTGTATACATTTCATATCATTAAATTTTTCCATG
TTATAATAGAATCATTAAACTAGTGAAATATCATACTCTTCCATTGATATATAAATTAGT
ATCATTCTAAATGTATCTTCTTTTTGTTTATATGTAATAGTAAATATTT

consensusID : consensus_9964#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 253
fasta sequence

                              [AAAATGTGATAGAATGTCTAGATACATTCTTTTTTATAATTCGTGGTCTAACACATCTTGTCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGGACCTAAATGGAGAAAATACTTATGGNNNNNNCNNNNNNN]

[+] EMBL CD083198             [AAAATGTGATAGAATGTCTAGATACATTCTTTTTTATAATTCGTGGTCTAACACATCTTGTCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGATTATGTATAGTTACTATGCATTTGCGGCTCTTGGACCTAAATGGAGAAAATACTTATGGNNNNNNCNNNNNNN]




>consensus_9964#2
AAAATGTGATAGAATGTCTAGATACATTCTTTTTTATAATTCGTGGTCTAACACATCTTG
TCACATGGTTACATGTCTATCATCATTGCACAATGATTCCGATAACATGGGCTGGAGTGA
AATGGGTAGCTGGAGGTGAATTATTTCAACCTGTCGTAGTCAACAGCGCAATTCATGTGA
TTATGTATAGTTACTATGCATTTGCGGCTCTTGGACCTAAATGGAGAAAATACTTATGGN
NNNNNCNNNNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9964#0      CCATTAATTCGGCACGAGCGCGCTTNATTGAAAATGAATGTAGTAGGTGAATATATAGAC 60
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      TGGATGAACAGGATTTTTAAAATAAGCATGGAAAGAGCAGATCCCAGAGTCTCTTCGTTG 120
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      CTTCTAATGAGTTCAGTTAATAGTTTATTGTTTGTGATCATTGCCTACCTAATATTAGTC 180
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      TATTATGGATTGAAGTTCATGAAAGGAAGGAATCCTTTCTGTATAAATCGACTCGTTTTT 240
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      ACGTATGATTGGATTATGGTAGTTATGAATGCCTATATGCTATATGAATCCATAGCAGTC 300
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      GCATTTAATGAAAATTACTCGATGTACTGTCAAAAAGTTGATTACAGCTCAAATCGTAAC 360
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      GCTTTAAGATTAGTTCGAGCTGTTTGGTTATTTCATATATCAAAAGTGAT---AGAATGT 417
consensus_9964#2      ----------------------------------------AAAATGTGAT---AGAATGT 17
consensus_9964#1      --------------------TTTCTCCCCATTACTTACAAGCAATGTGGTCTTAACAAAT 40
                                                                ** *** *   *  *  *

consensus_9964#0      TTAGATACATTCTTTTTTATAATTCGTGGTCGAACACATCTTGTCACATGGTTACA-TGT 476
consensus_9964#2      CTAGATACATTCTTTTTTATAATTCGTGGTCTAACACATCTTGTCACATGGTTACA-TGT 76
consensus_9964#1      CTGTATAT-TACTTCAATGTATTTTATCAAGCCACTC-TTCTATTACTTTTCTATAATCA 98
                       *  ***  * ***   * ** **  *      ** * *  * * ** *   ** * *  

consensus_9964#0      CTATCATCAT-TGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAG 535
consensus_9964#2      CTATCATCAT-TGCACAATGATTCCGATAACATGGGCTGGAGTGAAATGGGTAGCTGGAG 135
consensus_9964#1      CTATCATCATGCATATCATAAATCGAAAAAGCAAAATTTATGTAAAGCAACTGATCACAG 158
                      **********    *  ** * **  * **       *   ** **     *      **

consensus_9964#0      GTGAAT---TATTTCAACCTGTCGTAGTC---AACAGCGCAATTCA--TGTGATTA---T 584
consensus_9964#2      GTGAAT---TATTTCAACCTGTCGTAGTC---AACAGCGCAATTCA--TGTGATTA---T 184
consensus_9964#1      TTCAATAAACATTCAAACAAATGGAAATCTTAAAAAACATGAATGAGTTTTATTTAGATT 218
                       * ***    ***  ***   * * * **   ** * *   * * *  * *  ***   *

consensus_9964#0      GTATAGTTACTATG--CATTTGCGGCTCTTGGACCTAA---ATGGAGAAAATACTTATGG 639
consensus_9964#2      GTATAGTTACTATG--CATTTGCGGCTCTTGGACCTAA---ATGGAGAAAATACTTATGG 239
consensus_9964#1      ATTTGGTTATTTTAACCATTTACTGACAATATATTGAATATATTATAAAAAAATATATGG 278
                       * * **** * *   ***** * *    *  *   **   **    **** *  *****

consensus_9964#0      TGGAAACGTTACTTGACAATGCTACAAATGATTCAATTTACCTATGGAATTTTTTATTCC 699
consensus_9964#2      NNNNNNCNNNNNNN---------------------------------------------- 253
consensus_9964#1      AGAAAAAGTATATATTTTTTTTCACAGTAACAAAATAAAAACAAGAATGTGTATACATTT 338
                                                                                  

consensus_9964#0      TTCATTTCACTTTACAAGCAATGTGGTCTTAACAAATCTGTATATTACTTCAATGTATTT 759
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      CATATCATTAAATTTTTCCATGTTATAATAGAATCATTAAACTAGTGAAATATCATACTC 398
                                                                                  

consensus_9964#0      TATCAAGCCACTCTTCTATTACTTTTCTATAATCACTATCATCATGCATATCATANATCG 819
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      TTCCATTGATATATAAATTAGTATCATTCTAAATGTATCTTCTTTTTGTTTATATGTAAT 458
                                                                                  

consensus_9964#0      AAAAGCAAAATTTATGTAAAGCAACTGATCACAGTTCAATANACATTCAAACAAATGGAA 879
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      AGTAAATATTT------------------------------------------------- 469
                                                                                  

consensus_9964#0      ATCTTTAAAAACATGAATGAGTTTTATTTAGATTATTTGGTTATTTTAACCATTTACTGA 939
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      CANTATATTGAATATATTATAAAAAAATATATGGAGAAAAAGTATATATTTTTTTTACAG 999
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      TAACAAATAAAACAAGATGTGATACATTNATATCATTAAATTTCCTGTATATAGATCATA 1059
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      ACTAGNGAAATCTACTCTCCATGATTATAATAGATCATCTAATGATCTCTTTTGTTATTG 1119
consensus_9964#2      ------------------------------------------------------------
consensus_9964#1      ------------------------------------------------------------
                                                                                  

consensus_9964#0      AAAGAA 1125
consensus_9964#2      ------
consensus_9964#1      ------