These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1012#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence [CTGAGCGGCTAGCAGCTGGGATCACCCATCCGGCTAACAGCCAAGTCCCCGCTGACATTCCTTTCTTATCCTGTCCTTTATCGTTTCCAGTGATGCGAAAGCGGAATAACTCACCGACTGAGCAGCCTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCACTGTCAGGGTAACTGCGGGGCCCTCAGCTGACGACCGGCAGGGCCCCGGAGCTGAGGTGCACGCCATGAAACCGTTCAGGAGGTTGACTCTCCTGGGGAGGCTGAAGAGGTTGATGCTGTGGCTGTTGGTGGTCTACGTCTCCGTCCCCTTTATTGTCAAACTGTGTCCCTCCATCCAGGCCAAACTCGTCTTCCTCAATTTTGTCAGGGTGCCCTACTTCATCGACCTGAAGAGGCCCCTGGACCTGGGTCTAAACCACACCCACAACCTCTACCTGGAGCCAGAGGTCGGGATCAAGATAGGAGTCTGGCACACAGTTCCAGCTCAC] [+] EMBL FR0057810 [CTGAGCGGCTAGCAGCTGGGATCACCCATCCGGCTAACAGCCAAGTCCCCGCTGACATTCCTTTCTTATCCTGTCCTTTATCGTTTCCAGTGATGCGAAAGCGGAATAACTCACCGACTGAGCAGCCTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCACTGTCAGGGTAACTGCGGGGCCCTCAGCTGACGACCGGCAGGGCCCCGGAGCTGAGGTGCACGCCATGAAACCGTTCAGGAGGTTGACTCTCCTGGGGAGGCTGAAGAGGTTGATGCTGTGGCTGTTGGTGGTCTACGTCTCCGTCCCCTTTATTGTCAAACTGTGTCCCTCCATCCAGGCCAAACTCGTCTTCCTCAATTTTGTCAGGGTGCCCTACTTCATCGACCTGAAGAGGCCCCTGGACCTGGGTCTAAACCACACCCACAACCTCTACCTGGAGCCAGAGGTCGGGATCAAGATAGGAGTCTGGCACACAGTTCCAGCTCAC] consensusID : consensus_1012#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 255 fasta sequence [GTTGATCGTGGAATCATATTATCGTCCTTGCTATTTCTGACGTTGGCCCAAATGCTGCATTCCTGGTAGCCAGGAAAAGACCGACCCCGACATGTGATGCGGAAAGCGGAATAACTCACCGACTGAACAGACTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCACTGTCAGGGGAACTGCGGGGCCCTCAGTTGACGACCGTCAGGGCCCCGGAGCTGGGGGGGACCGCATGAAACCGGT] [+] EMBL FR0061616 [GTTGATCGTGGAATCATATTATCGTCCTTGCTATTTCTGACGTTGGCCCAAATGCTGCATTCCTGGTAGCCAGGAAAAGACCGACCCCGACATGTGATGCGGAAAGCGGAATAACTCACCGACTGAACAGACTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCACTGTCAGGGGAACTGCGGGGCCCTCAGTTGACGACCGTCAGGGCCCCGGAGCTGGGGGGGACCGCATGAAACCGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1012#0 -CTGAGCGGCTAGCAGCTGGGATCACCCATCCGGCTAACAGCCAAGTCCCCGCTGACATT 59 consensus_1012#1 GTTGATCGTGGAATCA-TATTATCGTCCTTGCTATTTCTGACGTTGGCCCAAATGCTGCA 59 *** ** * * *** ** * * * * * *** ** consensus_1012#0 CCTTTCTTATCCTGTCCTTTATCGTTTCCA----GTGATGCG-AAAGCGGAATAACTCAC 114 consensus_1012#1 TTCCTGGTAGCCAGGAAAAGACCGACCCCGACATGTGATGCGGAAAGCGGAATAACTCAC 119 * ** ** * * ** ** ******** ***************** consensus_1012#0 CGACTGAGCAGCCTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCA 174 consensus_1012#1 CGACTGAACAGACTGATAGTGGTTCTTTGCTGGAGGACGACCCGGACTTGAAACAGCGCA 179 ******* *** ************************************************ consensus_1012#0 CTGTCAGGGTAACTGCGGGGCCCTCAGCTGACGACCGGCAGGGCCCCGGAGCTGAGGTGC 234 consensus_1012#1 CTGTCAGGGGAACTGCGGGGCCCTCAGTTGACGACCGTCAGGGCCCCGGAGCTGGGGGGG 239 ********* ***************** ********* **************** ** * consensus_1012#0 ACGCCATGAAACCGTTCAGGAGGTTGACTCTCCTGGGGAGGCTGAAGAGGTTGATGCTGT 294 consensus_1012#1 ACCGCATGAAACCGGT-------------------------------------------- 255 ** ********** * consensus_1012#0 GGCTGTTGGTGGTCTACGTCTCCGTCCCCTTTATTGTCAAACTGTGTCCCTCCATCCAGG 354 consensus_1012#1 ------------------------------------------------------------ consensus_1012#0 CCAAACTCGTCTTCCTCAATTTTGTCAGGGTGCCCTACTTCATCGACCTGAAGAGGCCCC 414 consensus_1012#1 ------------------------------------------------------------ consensus_1012#0 TGGACCTGGGTCTAAACCACACCCACAACCTCTACCTGGAGCCAGAGGTCGGGATCAAGA 474 consensus_1012#1 ------------------------------------------------------------ consensus_1012#0 TAGGAGTCTGGCACACAGTTCCAGCTCAC 503 consensus_1012#1 ----------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |