These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1338#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [AAACGCGTCAGTCCGGGAGAGAAAGCGGGATTTGTGCCGGCTCGGTCCACCGAGGTGGTTCTGAGATCTCCCAGCTCCACATTCCTCCTGCTCTACCAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTTCCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAACACGGACACAGATAAAGTCCTGGGCGAGCTGGTCCGCATCGGAGCTGGGCAGGAGGCCAAGCAGGAACCCGTGACCACCGTGTCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATCCCCCACCGTACAGCTGCCTTTGCCCTCATCTGCTGCAGGTGGAGAGGACAAACACGGGGAGGACGATGTTCTCAGACCCATCGTTCTTGATGGGAGCAACGTGGCCATGAGTCATGGGAACAAGGAAGTTTTCTCTTGTTTGGGAATCCAGCTAGCTGTGAACTTCTTCCTGGAGCGTGGCCACACTCACATTACTGTCTTTGTCCCATCGTGGCGGAAGGAGCAGCCCAGGCCAGACGTTCCTATCACA] [+] EMBL BU807224 [AAACGCGTCAGTCCGGGAGAGAAAGCGGGATTTGTGCCGGCTCGGTCCACCGAGGTGGTTCTGAGATCTCCCAGCTCCACATTCCTCCTGCTCTACCAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTTCCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAACACGGACACAGATAAAGTCCTGGGCGAGCTGGTCCGCATCGGAGCTGGGCAGGAGGCCAAGCAGGAACCCGTGACCACCGTGTCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATCCCCCACCGTACAGCTGCCTTTGCCCTCATCTGCTGCAGGTGGAGAGGACAAACACGGGGAGGACGATGTTCTCAGACCCATCGTTCTTGATGGGAGCAACGTGGCCATGAGTCATGGGAACAAGGAAGTTTTCTCTTGTTTGGGAATCCAGCTAGCTGTGAACTTCTTCCTGGAGCGTGGCCACACTCACATTACTGTCTTTGTCCCATCGTGGCGGAAGGAGCAGCCCAGGCCAGACGTTCCTATCACA] consensusID : consensus_1338#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence [GGGGGTCTGAGGTTGTTTACGTGAAAAGCAAAAGATGAGCACTGAAGTCAAATTTTGAGCCCATACGTCGCTGACACGTCTGCACAGATCTCCCAGCTCCACATTCCTCCTGCTCTACCAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTTCCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAACACGGACACAGATAAAGTCCTGGGCGAGCTGGGCCGCATCGGAGCTGGGCAGGAGGCCAAGCAGGAACCCGTGACCACCGTGGCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATCC] [+] EMBL FR0061297 [GGGGGTCTGAGGTTGTTTACGTGAAAAGCAAAAGATGAGCACTGAAGTCAAATTTTGAGCCCATACGTCGCTGACACGTCTGCACAGATCTCCCAGCTCCACATTCCTCCTGCTCTACCAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTTCCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAACACGGACACAGATAAAGTCCTGGGCGAGCTGGGCCGCATCGGAGCTGGGCAGGAGGCCAAGCAGGAACCCGTGACCACCGTGGCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1338#0 -----------------------AAACGCGTCAGTCCGGGAGAGAAAGCGGGATTTGTGC 37 consensus_1338#1 GGGGGTCTGAGGTTGTTTACGTGAAAAGCAAAAGATGAGCACTGAAGTCAAATTTTGAGC 60 *** ** ** * * *** * **** ** consensus_1338#0 CGGCTCGGTCCACCGAGGTGGTTCTG-AGATCTCCCAGCTCCACATTCCTCCTGCTCTAC 96 consensus_1338#1 CCATACG--TCGCTGACACGTCTGCACAGATCTCCCAGCTCCACATTCCTCCTGCTCTAC 118 * ** * * ** * * ********************************* consensus_1338#0 CAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTT 156 consensus_1338#1 CAGTAGGAGCATGGATCCCTCTGCAGACCCCCAGCACCACCCGGCCCAGATGGACTTCTT 178 ************************************************************ consensus_1338#0 CCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAA 216 consensus_1338#1 CCACAAGCTGGGCTACTCCACGGCTCAGGTCCAGGCCATCCAGCAGCAGTTTGGCCCCAA 238 ************************************************************ consensus_1338#0 CACGGACACAGATAAAGTCCTGGGCGAGCTGGTCCGCATCGGAGCTGGGCAGGAGGCCAA 276 consensus_1338#1 CACGGACACAGATAAAGTCCTGGGCGAGCTGGGCCGCATCGGAGCTGGGCAGGAGGCCAA 298 ******************************** *************************** consensus_1338#0 GCAGGAACCCGTGACCACCGTGTCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATC 336 consensus_1338#1 GCAGGAACCCGTGACCACCGTGGCTGTGCTGGTGCCCAGAGGGAACCACCAGAATTCATC 358 ********************** ************************************* consensus_1338#0 CCCCACCGTACAGCTGCCTTTGCCCTCATCTGCTGCAGGTGGAGAGGACAAACACGGGGA 396 consensus_1338#1 C----------------------------------------------------------- 359 * consensus_1338#0 GGACGATGTTCTCAGACCCATCGTTCTTGATGGGAGCAACGTGGCCATGAGTCATGGGAA 456 consensus_1338#1 ------------------------------------------------------------ consensus_1338#0 CAAGGAAGTTTTCTCTTGTTTGGGAATCCAGCTAGCTGTGAACTTCTTCCTGGAGCGTGG 516 consensus_1338#1 ------------------------------------------------------------ consensus_1338#0 CCACACTCACATTACTGTCTTTGTCCCATCGTGGCGGAAGGAGCAGCCCAGGCCAGACGT 576 consensus_1338#1 ------------------------------------------------------------ consensus_1338#0 TCCTATCACA 586 consensus_1338#1 ---------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |