These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1377#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence [GAGGGAGGAGGGAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGTATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTGTGGCCTGAACCAAGACCCCAAAGGTGCTGCAAGACATTTTAACTTGAAGAGCCTGCAGAGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGAGCCGAGCAGCCTGAAGAGCTGAGCAGCCTAAAGAGCTGAGCAGCCTAAAGAGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGAGCTGAGCAACCTAAACCATGTTTCTCTTCCCCCTCATCTTCATCCATCCTCAGGTTTCCAGCTCTGAGTGTTATCTGGAGATCTGCTGCAGTCCCACTTCTGTTGTGAGCTCTACAAAAGAT] [+] EMBL BU807575 [GAGGGAGGAGGGAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGTATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTGTGGCCTGAACCAAGACCCCAAAGGTGCTGCAAGACATTTTAACTTGAAGAGCCTGCAGAGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGAGCCGAGCAGCCTGAAGAGCTGAGCAGCCTAAAGAGCTGAGCAGCCTAAAGAGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGAGCTGAGCAACCTAAACCATGTTTCTCTTCCCCCTCATCTTCATCCATCCTCAGGTTTCCAGCTCTGAGTGTTATCTGGAGATCTGCTGCAGTCCCACTTCTGTTGTGAGCTCTACAAAAGAT] consensusID : consensus_1377#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 314 fasta sequence [ATGCTGCACGGCCCCGCTGGGGGACGCCAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGTATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTGTGGCCTGAACCAAGACCCCAAAGGTTTCCAGCTCTGAGTGTTATCTGGAGATCTGCTGCAGTCCCACTTCTGTTGTGAGCTCTACAAAAGATCTCCTATCTCCATCCACCANATTCCAGTCTGGTTCTCAGGCAAAGAAGCAGACGTATCTGAGGCTTTCATCAAGCTCCCTACAGCGAGTTCATGGAGGAGGC] [+] EMBL FR0060432 [ATGCTGCACGGCCCCGCTGGGGGACGCCAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGTATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTGTGGCCTGAACCAAGACCCCAAAGGTTTCCAGCTCTGAGTGTTATCTGGAGATCTGCTGCAGTCCCACTTCTGTTGTGAGCTCTACAAAAGATCTCCTATCTCCATCCACCANATTCCAGTCTGGTTCTCAGGCAAAGAAGCAGACGTATCTGAGGCTTTCATCAAGCTCCCTACAGCGAGTTCATGGAGGAGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1377#0 ----------------GAGGGAGGAGGGAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGT 44 consensus_1377#1 ATGCTGCACGGCCCCGCTGGGGGACGCCAGGAGGGCTGGGTGTGTGTGCAGGGCGAGTGT 60 *** * * ******************************** consensus_1377#0 ATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTG 104 consensus_1377#1 ATTCACCTGATGTGGTCAGGGTATCCGTACATGCCTGTAGAGTCCCACTGCTCTATCGTG 120 ************************************************************ consensus_1377#0 TGGCCTGAACCAAGACCCCAAAGGTGCTGCAAGAC--ATTTTAACTTGAAGAGCCTGCAG 162 consensus_1377#1 TGGCCTGAACCAAGACCCCAAAGGT-TTCCAGCTCTGAGTGTTATCTGGAGA-TCTGCTG 178 ************************* * ** * * * * * ** *** **** * consensus_1377#0 AGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGAGCCGAGCAGCCTGAAGAGCTGAGCA 222 consensus_1377#1 CAGTCCCACTTCTGTTG---TGAGCTCTACAAAAGATCTCCTATCTCCATCCACCA--NA 233 * *** * ***** *** * * * * * * consensus_1377#0 GCCTAAAGAGCTGAGCAGCCTAAAGAGCTGAGCAGCCTGAAGAGCTGAGCAACCTAAAGA 282 consensus_1377#1 TTCCAGTCTGGTTCTCAGGCAAAGAAGCAGACGTATCTGAGGCTTTCATCAAGCTCCCTA 293 * * * * *** * ** *** ** **** * * * *** ** * consensus_1377#0 GCTGAGCAACCTAAACCATGTTTCTCTTCCCCCTCATCTTCATCCATCCTCAGGTTTCCA 342 consensus_1377#1 CAGCGAGTTCATGGAGGAGGC--------------------------------------- 314 * * * * * consensus_1377#0 GCTCTGAGTGTTATCTGGAGATCTGCTGCAGTCCCACTTCTGTTGTGAGCTCTACAAAAG 402 consensus_1377#1 ------------------------------------------------------------ consensus_1377#0 AT 404 consensus_1377#1 -- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |