Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 140 cluster # 140       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_140#0 length = 548 sequences # 2  

consensusID : consensus_140#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 548
fasta sequence
                              [ATCATTTTAATGAAAAGAAACGACCTGAACAGAAAATTAGTGCGTTACTCTGTGGTTCTTCATGTTAAAGCGCTGAAGCTGGCTCATCACCATTAAAGTGCCCCCGTAGGTCACAGCCCACCAGACTGCAGCCCTCGCGGCGTCACGGTAACGATGAGAGAGGTGCGAGCGCTCGGTGAGGGCGAGTGCATAAATGTCAGTGGACAGACCGGAGCCTTCGTCTCCTTCCTGTCGCTACCGCTCCCCGGCCACTTCTGCCCGGCGACCACAAGCGACCCGCTCAAAAGTGACGTTTGTCAAGTGATCGTAAAGTATCTCAGTGTCGTTAATGCTAAAATCTTTGAAGACCGTCCCTTTAAAAAAATAGTTCCTATATTTCCACAGGTGTTTTTCTACAGAATATACAAGTTCTATTTTGTACAGCAAAGAAAATAATGTTCTGTCAGAGACCAGTTTGGAAGGTGAGACTCACAACTTCACCCAAAAAGGTACTAAAGGGAAAAGACAGGTGCCTTCAACACTGGGAGTTTCACTATTTTCACTACAAC]

[+] EMBL CA329419             [ATCATTTTAATGAAAAGAAACGACCTGAACAGAAAATTAGTGCGTTACTCTGTGGTTCTTCATGTTAAAGCGCTGAAGCTGGCTCATCACCATTAAAGTGCCCCCGTAGGTCACAGCCCACCAGACTGCAGCCCTCGCGGCGTCACGGTAACGATGAGAGAGGTGCGAGCGCTCGGTGAGGGCGAGTGCATAAATGTCAGTGGA AGATCGGAGCCTTCGTCTCCTTCCTGTCGCTACCGCTCCCCGGCCACTTCTGCCCGGCGACCACAAGCGACCCGCTCAAAAGTGACGTTTGTCAAGTGATCGTAAAGTATCTCAGTGTCGTTAATGCTAAAATCTTTGAAGACCGTCCCTTTAAAAAAATAGTTCCTATATTTCCACAGGTGTTTTTCTACAGAATATACAAGTTCTATTTTGTACAGCAAAGAAAATAATGTTCTGTCAGACTCCAGTTTGGCACGTGTTCCTCACAACTTCACCCAAAAAGGTACTAAAGGGAAAAGACAGGTGCCTTCAACACTGGGAGTTTCACTATTTTCACTACAAC]
[-] EMBL FR0056693            [                                                                                                                                                                                                      ACTGGACAGACCGGACCCTTCGTCTCCTTCCTGTCGCTACCGCTCCCCGCCCACTTCTGCCCGGCGACCACAAGCGCCCCGCTCAAAAGTGACGTTTGTCACGTGATCGTAAAGTATCTCAGTGTCGTTAATGCTAAAATCTTTGAAGACCGTCCCTTTAAAAAAATAGTTCCTATATTTCCACAGGTGTTTTTCTACAGAATATACAAGTTCTATTTTGTACAGCAAAGAAAATAATGTTCTGTTAGAGAC  TTTTGTAAGGTCAGA                                                                                 ]


>consensus_140#0 ATCATTTTAATGAAAAGAAACGACCTGAACAGAAAATTAGTGCGTTACTCTGTGGTTCTT CATGTTAAAGCGCTGAAGCTGGCTCATCACCATTAAAGTGCCCCCGTAGGTCACAGCCCA CCAGACTGCAGCCCTCGCGGCGTCACGGTAACGATGAGAGAGGTGCGAGCGCTCGGTGAG GGCGAGTGCATAAATGTCAGTGGACAGACCGGAGCCTTCGTCTCCTTCCTGTCGCTACCG CTCCCCGGCCACTTCTGCCCGGCGACCACAAGCGACCCGCTCAAAAGTGACGTTTGTCAA GTGATCGTAAAGTATCTCAGTGTCGTTAATGCTAAAATCTTTGAAGACCGTCCCTTTAAA AAAATAGTTCCTATATTTCCACAGGTGTTTTTCTACAGAATATACAAGTTCTATTTTGTA CAGCAAAGAAAATAATGTTCTGTCAGAGACCAGTTTGGAAGGTGAGACTCACAACTTCAC CCAAAAAGGTACTAAAGGGAAAAGACAGGTGCCTTCAACACTGGGAGTTTCACTATTTTC ACTACAAC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)