These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 152 fasta sequence [TGAAGCTGCACCGAATCATTTTCTGTTAAAAAGGACAAGTTTTGACTCAAGTGACTGCTGGAATCAACGTTTCAAGACACTCGGCTGTCTTGCTTGACATGAAGTTGTGAACTTAATAAAGTCAAATATGTCAAAACNAAAAAAAAAAAAAA] [+] EMBL CA845578 [TGAAGCTGCACCGAATCATTTTCTGTTAAAAAGGACAAGTTTTGACTCCAGTGACTGCTGGAATCAACGTTTCAAGACACTCGGCTGTCTTGCTTGACATGAAGTTGTGAACTTAATAAAGTCAAATATGTCAAAACNAAAAAAAAAAAAAA] [+] EMBL CA847167 [ AAAGGACAAGTTTTGACTCAAGTGACTGCTGGAATCCTCCTTTCAAGACACTCGGCTGTCTTGCTTGACATGAAGTTGTGAACTTAATAAAGTCAAATATGTCAAAAC ] consensusID : consensus_1469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 67 fasta sequence [GAGTCAAAACTTGTCCTTTTTAACAGAAAATGATTCGGTGCAGCTTCAATTTACAGCTCTTTTCCCG] [+] EMBL CA588710 [GAGTCAAAACTTGTCCTTTTTAACAGAAAATGATTCGGTGCAGCTTCAATTTACAGCTCTTTTCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1469#0 TGAAGCTGCACCGAATCATTTTCTGTTAAAAAGGACAAGTTTTGACTCAAGTGACTGCTG 60 consensus_1469#1 -------GAGTCAAAACTTGTCCTTTTTAACAGAAAATGATTCGGTGCAGCTTCAATTTA 53 * * ** * * * ** ** ** ** * * * ** * ** * * consensus_1469#0 GAATCAACGTTTCAAGACACTCGGCTGTCTTGCTTGACATGAAGTTGTGAACTTAATAAA 120 consensus_1469#1 CAGCTCTTTTCCCG---------------------------------------------- 67 * * * consensus_1469#0 GTCAAATATGTCAAAACNAAAAAAAAAAAAAA 152 consensus_1469#1 -------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |