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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1501#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 640 fasta sequence
[AAGAAGTCTGCAAATCTTCCAGAACAGCCCTGCACTACTGGTGTCAGCCAAGTAAAGAGCCATCATGAGTAGGGACCCAGAAATGGAGTGCTTTGGCCCGGCGGCCATTTACCTCCGGAAGCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTTTGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAAAGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCCCATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGAGCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTCTGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAGTGGTTGTAGGGGGATACAGAGGCAAAAAGAGGATTGAAGCGCCGCCTCACATCTTCTCCATCTCTGACAACGCCTATCAGTTCATGCTTCAAGATAGAGAAAACCAGTCTATCCTGATTACTGGAGAATCCGGTGCTGGAAAGACTGTCAACACCAAACGTGTC]
[+] EMBL BU805221 [AAGAAGTCTGCAAATCTTCCAGAACAGCCCTGCACTACTGGTGTCAGCCAAGTAAAGAGCCATCATGAGTAGGGACCCAGAAATGGAGTGCTTTGGCCCGGCGGCCATTTACCTCCGGAAGCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTTTGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAAAGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCCCATGAACCCTCCAAAGTTTGATAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGAGCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTCTGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAGTGGTTGTAGGGGGATACAGAGGCAAAAAGAGGATTGAAGCGCCGCCTCACATCTTCTCCATCTCTGACAACGCCTATCAGTTCATGCTTCAAGATAGAGAAAACCAGTCTATCCTGATTACTGGAGAATCCGGTGCTGGAAAGA ]
[+] EMBL CA591259 [ AGAAGTCTGCAAATCTTCCAGAACAGCCCTGCACTACTGGTGTCAGCCAAGTAAAGAGCCATCATGAGTAGGGACCCAGAAATGGAGTGCTTTGGCCCGGCGGCCATTTACCTCCGGAAGCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTTTGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAAAGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCCCATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGAGCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTCTGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAGTGGTTGTAGGGGGATACAGAGGCAAAAAGAGGATTGAAGCGCCGCCTCACATCTTCTCCATCTCTGACAACGCCTATCAGTTCATGCTTCAAGATAGAGAAAACCAGTCTATCCTGATTACTGGAGAATCCGGTGCTGGAAAGACTGTCAACACCAAACGTGTC]
consensusID : consensus_1501#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 454 fasta sequence
[ATCTACTAAAGAACTGTATCACTTGGGAACAAAAGACGATCAACCATGGGTGACGCAGAAATGGAGTGTTATGGCCCGGCGGCCGTTTTCCTCCGGAAGCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTTTGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAAAGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCCCATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGAGCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTCTGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAG]
[+] EMBL BU804769 [ATCTACTAAAGAACTGTATCACTTGGGAACAAAAGACGATCAACCATGGGTGACGCAGAAATGGAGTGTTATGGCCCGGCGGCCGTTTTCCTCCGGAAGCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTTTGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAAAGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCCCATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGAGCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTCTGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1501#0 AAGAAGTCTGCAAATCTTCCAGAACAGCCCTGCACTACTGGTGTCAGCCAAGTAAAGAGC 60
consensus_1501#1 -------------ATCTACTAAAGAA---CTGTATCACTTGGG---AACAAAAGACGATC 41
**** * * * * *** * *** * * *** * ** *
consensus_1501#0 CATCATGAGTAGGGACCCAGAAATGGAGTGCTTTGGCCCGGCGGCCATTTACCTCCGGAA 120
consensus_1501#1 AACCATGGGT---GACGCAGAAATGGAGTGTTATGGCCCGGCGGCCGTTTTCCTCCGGAA 98
* **** ** *** ************* * ************* *** *********
consensus_1501#0 GCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTT 180
consensus_1501#1 GCCAGAGAAAGAGAGGATTGAAGCCCAGAACACCCCCTTTGATGCTAAAACAGCATATTT 158
************************************************************
consensus_1501#0 TGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAA 240
consensus_1501#1 TGTGACTGAACCCAAGGAGATGTACCTCAAAGGGAAACTCATCAAGAAAGAAGGTGGCAA 218
************************************************************
consensus_1501#0 AGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCC 300
consensus_1501#1 AGCCACAGTAGAGACTCTGTGTAAGAAGACGATCACTGTGAAAGACGATGAAATCTTCCC 278
************************************************************
consensus_1501#0 CATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGA 360
consensus_1501#1 CATGAACCCTCCAAAGTTTGACAAGATTGAGGACATGGCCATGATGACCCACCTCAGTGA 338
************************************************************
consensus_1501#0 GCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTC 420
consensus_1501#1 GCCCACCGTGCTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACATACTC 398
************************************************************
consensus_1501#0 TGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAGTGGT 480
consensus_1501#1 TGGGTTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGATTCAG---- 454
********************************************************
consensus_1501#0 TGTAGGGGGATACAGAGGCAAAAAGAGGATTGAAGCGCCGCCTCACATCTTCTCCATCTC 540
consensus_1501#1 ------------------------------------------------------------
consensus_1501#0 TGACAACGCCTATCAGTTCATGCTTCAAGATAGAGAAAACCAGTCTATCCTGATTACTGG 600
consensus_1501#1 ------------------------------------------------------------
consensus_1501#0 AGAATCCGGTGCTGGAAAGACTGTCAACACCAAACGTGTC 640
consensus_1501#1 ----------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |