Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1542 cluster # 1542       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1542#0 length = 996 sequences # 3  

consensusID : consensus_1542#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 996
fasta sequence
                              [CCATTACGAGCAGCAGACGGACGGAGTTGAGAGAGGAAGCTTGCATAAGATGCTCAGCTCTCCCTTGCAAGGAACTCCTGTTGTTTGTGTGGTTGATCTGAGTCTAGTGAACGAACAGCGCGGGTGACCGAACATCACCCTCACAAAAATTGGTCCTTCGAGCCGGATCCCAAGACCTGGAGAGGAGCGCCGTGGGACGACTGAACGCCGAAGTCTCCGCAGCCAGAGTCAAAAAGACGTCCGAATCGAAAGACCTTTCATCACGAGTTGACGGAAGGCCGGTCTTCGTCCCTCCCAGGGCGACCATCTCCAGTGACGGGAAGAAGGCACCAAAACAACTCAGAGA-GAAACCATAGAGACAACGGAATGGACGCTGGACAGCTGTCAAGGGCCGAAGCATTGGCACTCTCTGGTCACAGGCACACGTGTCATGTGATGCTGTACTCAACCACCAACACTCAGCTGTTTGGGAAAATTCCCATCAGATACATAATCCTCATGCAGATGCGCTTTGAAGGTCTTCTGGGTTTCCCGGGTGGGCTCGTTGACCCATCGAGGGAGACGCTGGAGGATGGGCTGAGCAGGGAGTTACTGGAGGAGCTGGGTGTAAGGCTGCCGGTCTCAATAGAAGATCATGTCAGTTCCTGCTATGGTCCTCCTCTCCGCCCCATCTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCTTCTACTCCCCCCCTCCTCTTATCACACACTTCTATGTGAAGAAGATCGAGGAGGAGCAGGTCAAAGAGGTGGAGCGAGCAGCAGCCTCTACTGCCGCAGACCACGGATTGGAGGTTCTCGGGATGGTCAGAGTCCCGCTCTACACCTTAAAACGAGGTGGAGGCCTCCCGTTATTCCTGTCACACACATTTATCGGCAACGCTCGCTCCCAGCTGGTCAGCACCATACTCCGCCTTCAAATGATGGCCCGCGAGGAGTTGCACAAAGCCCTCACACTCTCGGTGCAAACACAC]

[+] EMBL CA588421             [CCATTACGAGCAGCAGACGGACGGAGTTGAGAGAGGAAGCTTGCATAAGATGCTCAGCTCTCCCTTGCAAGGAACTCCTGTTGTTTGTGTGGTTGATCTGAGTCTAGTGAACGAACAGCGCGGGTGACCAAACATCACCCTCACAAAAATTGGTCCTTCGAGCCGGATCCCAAGACCTGGAGAGGAGCGCCGTGGGACGACTGAACGCCGAAGTCTCCGCAGCCAGAGTCAAAAAGACGTCCGAATCGAAAGACCTTTCATCACGAGTTGACGGAAGGCCGGTCTTCGTCCCTCCCAGGGCGACCATCTCCAGTGACGGGAAGAAGGCACCAAAACAACTCAGAGATTATTTCATAGAGACAACGGAATGGACGCTGGACAGCTGTCAAGGGCCGAAGCATTGGCACTCTCTGGTCACAGGCACACGTGTCATGTGATGCTGTACTCAACTACCAACACTCAGCTGTTTGAGAAAATTCCCATCAGATACATAATCCTCATGCAGATGCGCTTTGAAGGTCTTCTGGGTTTCCCGGGTGGGCTCGTTGACCTATCGAAGGAGACGCTGGAGGATGGGCTGAGCAGGGAGTTACTGGAGGAGCTGGGTGTAAGGCT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL FR0061869            [                                                                                                     GTCTAGTGAACGAACAGCGCGGGTGACCGAACATCACCCTCACAAAAATTGGTCCTTCGAGCCGGATCCCAAGACCTGGAGAGGAGCGCCGTGGGACGACTGAACGCCGAAGTCTCCGCAGCCAGAGTCAAAAAGACGTCCGAATCGAAAGACCTTTCATCACGAGTTGACGGAAGGCCGGTCTTCGTCCCTCCCAGGGCGACCATCTCCAGTGACGGGAAGAAGGCACCAAAACAACTCAGAGA GAAACCATAGAGACAACGGAATGGACGCTGGACAGCTGTCAAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA330048             [                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTCATGTGATGCTGTACTCAACCACCAACACTCAGCTGTTTGGGAAAATTCCCATCAGATACATAATCCTCATGCAGATGCGCTTTGACGGTCTTCTGGGTTTCCCGGGTGGGCTCGTTGACCCATCGAGGGAGACGCTGGAGGATGGGCTGAGCAGAGAGTTACTGGAGGAGCTGGGTGTAAGGCTGCCGGTCTCAATAGAAGATCATGTCAGTTCCTGCTATGGTCCTCCTCTCCGCCCCATCTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCTTCTACTCCCCCCCTCCTCTTATCACACACTTCTATGTGAAGAAGATCGAGGAGGAGCAGGTCAAAGAGGTGGAGCGAGCAGCAGCCTCTACTGCCGCAGACCACGGATTGGAGGTTCTCGGGATGGTCAGAGTCCCGCTCTACACCTTAAAACGAGGTGGAGGCCTCCCGTTATTCCTGTCACACACATTTATCGGCAACGCTCGCTCCCAGCTGGTCAGCACCATACTCCGCCTTCAAATGATGGCCCGCGAGGAGTTGCACAAAGCCCTCACACTCTCGGTGCAAACACAC]


>consensus_1542#0 CCATTACGAGCAGCAGACGGACGGAGTTGAGAGAGGAAGCTTGCATAAGATGCTCAGCTC TCCCTTGCAAGGAACTCCTGTTGTTTGTGTGGTTGATCTGAGTCTAGTGAACGAACAGCG CGGGTGACCGAACATCACCCTCACAAAAATTGGTCCTTCGAGCCGGATCCCAAGACCTGG AGAGGAGCGCCGTGGGACGACTGAACGCCGAAGTCTCCGCAGCCAGAGTCAAAAAGACGT CCGAATCGAAAGACCTTTCATCACGAGTTGACGGAAGGCCGGTCTTCGTCCCTCCCAGGG CGACCATCTCCAGTGACGGGAAGAAGGCACCAAAACAACTCAGAGAGAAACCATAGAGAC AACGGAATGGACGCTGGACAGCTGTCAAGGGCCGAAGCATTGGCACTCTCTGGTCACAGG CACACGTGTCATGTGATGCTGTACTCAACCACCAACACTCAGCTGTTTGGGAAAATTCCC ATCAGATACATAATCCTCATGCAGATGCGCTTTGAAGGTCTTCTGGGTTTCCCGGGTGGG CTCGTTGACCCATCGAGGGAGACGCTGGAGGATGGGCTGAGCAGGGAGTTACTGGAGGAG CTGGGTGTAAGGCTGCCGGTCTCAATAGAAGATCATGTCAGTTCCTGCTATGGTCCTCCT CTCCGCCCCATCTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCTTCTACTCCCCCCCTCCT CTTATCACACACTTCTATGTGAAGAAGATCGAGGAGGAGCAGGTCAAAGAGGTGGAGCGA GCAGCAGCCTCTACTGCCGCAGACCACGGATTGGAGGTTCTCGGGATGGTCAGAGTCCCG CTCTACACCTTAAAACGAGGTGGAGGCCTCCCGTTATTCCTGTCACACACATTTATCGGC AACGCTCGCTCCCAGCTGGTCAGCACCATACTCCGCCTTCAAATGATGGCCCGCGAGGAG TTGCACAAAGCCCTCACACTCTCGGTGCAAACACAC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)