Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1579 cluster # 1579       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1579#0 length = 932 sequences # 3  

consensusID : consensus_1579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 932
fasta sequence
                              [CCGTCGGTTTCCAGACTGGAGTGGCATCCCTTCACCCTGACCTCTGCGCCCGAGGAGGACTACTTCAGCGCCCACATCCGCATCGTCGGGGACTGGACACAGGCGCTGTATGAGGCCTGCGGCGGAGACAAAAGCGAGCCTCAGGAGGCCTGGAAGCTGCCCAAAGTGGCCATTGACGGACCCTTTGGTACAGCCAGTGAGGACGTGTTCCGTTACGAGGTGGTAATGCTGGTGGGCGCCGGGATCGGCGTGACACCTTTTGCATCAATCCTCAAGTCAGTGTGGTACAAACACATCCAGAACAACCAGGAGGTCTTCACCAAGAAGATCTACTTCTACTGGCTGTGTCCGGAGACGGAGGCCTTCGAGTGGTTCGCGGACCTGCTGCAGTCTCTGGAGGGTCATATGACGGAGAAGGGAATGACGGACTTCCTGAGCTACAACATCTACCTCACCAGGTGGAAGGAGAAGGAGGCAGCACACTTCCGCGTTCACCACGAGGCAGAAAACGACCCGATAACTGGCCTCAAACAGAAGACTCTTTATGGGAAGCCTAACTGGGACAATGAGTTTACCAATATTGCATCCAAACACCCGGGATCGAAAGTGGGGGTCTTTCTCTGCGGCCCCCCTCAGTTGGGGAAATCCCTGCAGAAGCAGTGCCTGTCTCACTCCGAGGCCGACGTCAAGTTCATCTTCAACAAGGAGAATTTCTAAAGGCGCGACCGAGGCCTCCACCAGGAAGAGGCAACAAAGACTGAGACGATGTCTCCTTTATATTTCGGTTGCTGACCTCTTCTGACCACAAACAATCCGTTGTTGCTCAAAGGCTGAGGAAATATATCAGTATTTTCCCATAGTTCCTTTTTTCTGCTTCAGAAAGAGGAACCCTTTTCTCCATGTACAGTGTCTTTGACAGCTCCAGACGTTGA]

[+] EMBL CA329896             [CCGTCGGTTTCCAGACTGGAGTGGCATCCCTTCACCCTGACCTCTGCGCCCGAGGAGGACTACTTCAGCGCCCACATCCGCATCGTCGGGGACTGGACACAGGCGCTGTATGAGGCCTGCGGCGGAGACAAAAGCGAGCCTCAGGAGGCCTGGAAGCTGCCCAAAGTGGCCATTGACGGACCCTTTGGTACAGCCAGTGAGGACGTGTTCCGTTACGAGGTGGTAATGCTGGTGGGCGCCGGGATCGGCGTGACACCTTTTGCATCAATCCTCAAGTCAGTGTGGTACAAACACATCCAGAACAACCAGGAGGTCTTCACCAAGAAGATCTACTTCTACTGGCTGTGTCCGGAGACGGAGGCCTTCGAGTGGTTCGCGGACCTGCTGCAGTCTCTGGAGGGTCAGATGACGGAGAAGGGAATGACGGACTTCCTGAGCTACAACATCTACCTCACCAGGTGGAAGGAGAAGGAGGCAGCACACTTCCGCGTTCACCACGAGGCAGAAAACGACCCGATAACTGGCCTCAAACAGAAGACTCTTTATGGGAAGCCTAACTGGGACAATGAGTTTACCAATA                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA330552             [                                                                                                                                                                                                                                                                                                                                                                              GAGTGGTTCGCGGACCTGCTGCAGTCTCTGGAGGGTCATATGACGGAGAAGGGAATGACGGACTTCCTGAGCTACAACATCTACCTCACCAGGTGGAAGGAGAAGGAGGCAGCACACTTCCGCGTTCACCACGAGGCAGAAAACGACCCGATAACTGGCCTCAAACAGAAGACTCTTTATGGGAAGCCTAACTGGGACAATGAGTTTACCAATATTGCATCCAAACACCCGGGATCG ATTTGGTGGTCTTTCTCTGCGGCCCCCCTCAGTTGGGGAAATCCCTGCAGAAGCAGTGCCTGTCTCACTCCGAGGCCGACGTCAAGTTCATCTTCAACAAGGAGAATTTCTAAAGGCGCGACCGAGGCCTCCACCAGGAAGAGGCAACAAAGACTGAGACGATGTCTCCTTTATATTTCGGTTGCTGACCTCTTCTGACCACAAACAATCCGTTGTTGCTCAAAGGCTGAGGAAATATATCAGTATTTTCCCATAGTTCCTTT                                                                 ]
[+] EMBL CA330605             [                                                                                                                                                                                                                                                                                                                                                                                                           GGAGGGTCTTATGACGGAGAAGGGAATGACGGACTTCCTGAGCTACAACATCTACCTCACCAGGTGGAAGGAGAAGGAGGCAGCACACTTCCGCGTTCACCACGAGGCAGAAAACGACCCGATAACTGGCCTCAAACAGAAGACTCTTTATGGGAAGCCTAACTGGGACAATGAGTTTACCAATATTGCATCCAAACACCCGGGATCGAAAGTGTGGGTCTTTCTCTGCGGCCCCCCTCAGTTGGGGAAATCCCTGCAGAAGCAGTGCCTGTCTCACTCCGAGGCCGACGTCAAGTTCATCTTCAACAAGGAGAATTTCTAAAGGCGCGACCGAGGCCTCCACCAGGAAGAGGCAACAAAGACTGAGACGATGTCTCCTTTATATTTCGGTTGCTGACCTCTTCTGACCACAAACAATCCGTTGTTGCTCAAAGGCTGAGGAAATATATCAGTATTTTCCCATAGTTCCTTTTTTCTGCTTCAGAAAGAGGAACCCTTTTCTCCATGTACAGTGTCTTTGACAGCTCCAGACGTTGA]


>consensus_1579#0 CCGTCGGTTTCCAGACTGGAGTGGCATCCCTTCACCCTGACCTCTGCGCCCGAGGAGGAC TACTTCAGCGCCCACATCCGCATCGTCGGGGACTGGACACAGGCGCTGTATGAGGCCTGC GGCGGAGACAAAAGCGAGCCTCAGGAGGCCTGGAAGCTGCCCAAAGTGGCCATTGACGGA CCCTTTGGTACAGCCAGTGAGGACGTGTTCCGTTACGAGGTGGTAATGCTGGTGGGCGCC GGGATCGGCGTGACACCTTTTGCATCAATCCTCAAGTCAGTGTGGTACAAACACATCCAG AACAACCAGGAGGTCTTCACCAAGAAGATCTACTTCTACTGGCTGTGTCCGGAGACGGAG GCCTTCGAGTGGTTCGCGGACCTGCTGCAGTCTCTGGAGGGTCATATGACGGAGAAGGGA ATGACGGACTTCCTGAGCTACAACATCTACCTCACCAGGTGGAAGGAGAAGGAGGCAGCA CACTTCCGCGTTCACCACGAGGCAGAAAACGACCCGATAACTGGCCTCAAACAGAAGACT CTTTATGGGAAGCCTAACTGGGACAATGAGTTTACCAATATTGCATCCAAACACCCGGGA TCGAAAGTGGGGGTCTTTCTCTGCGGCCCCCCTCAGTTGGGGAAATCCCTGCAGAAGCAG TGCCTGTCTCACTCCGAGGCCGACGTCAAGTTCATCTTCAACAAGGAGAATTTCTAAAGG CGCGACCGAGGCCTCCACCAGGAAGAGGCAACAAAGACTGAGACGATGTCTCCTTTATAT TTCGGTTGCTGACCTCTTCTGACCACAAACAATCCGTTGTTGCTCAAAGGCTGAGGAAAT ATATCAGTATTTTCCCATAGTTCCTTTTTTCTGCTTCAGAAAGAGGAACCCTTTTCTCCA TGTACAGTGTCTTTGACAGCTCCAGACGTTGA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)