These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 368 fasta sequence [GCAACACAAGATGGCAAAGATCCTGAGTGCCACCATCGTCGCGGCTGCATTGTTGGTCGTAGTCAACTCGCTGACGTGCAACCAGTGCAAATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACGAGCGTGTTGCTTCACTGGAAAAGCGACGTTCGCATCCATCTCCAGCTCCGTGGGCTTCAACATGCAGGGCTGCAGAGAGCCGACCGGGTGCAGCAGCACCACCAACGGAACCATCCTGGGGGTCACCTACGAGAGCACTCCTGGCCTGCTGCTCCACAGCCAAGTGCAAGCCGGTGACAGTCACCGGTGCCCCGACCAGCAGGGTGACCTTGGCGGGAAG] [+] EMBL FR0056529 [GCAACACAAGATGGCAAAGATCCTGAGTGCCACCATCGTCGCGGTTGCATTGTTGGTCGTAGTCAACTCGCTGACGTGCAACCAGTGCAAATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACGAGCGT TTGCTTCACTGGTAAAGCGACGTTCGCATCCATCTCCAGCTCCGTGGGCTTCAACATGCAGGGCTGCAGAGAGCCGCCCGGTTGCAGCAGCACCACCAACG ] [+] EMBL FR0056227 [ CGTCGCGGCTGCATTGTTGGTCGTAGTCAACTCGCTGACGTGCAACCAGTGCAACTACGGCTTGGCACGGTTCTGCCTCAGCACTTCTGAAGTGATGTGCTCGACCAATACCAGCGTGTTGCTTCACTGGAAAAGCGACGTTCCCATCCATCTCCAGCTCCGTGGGCTTCAACATGCAGGGCTGCAGAGAGCCGACCGGGTGCACCACCACCACCAACGGAACCATCCTGGGGGTCACCTACGAGAGCACTCCTGGCCTGCTGCTCCACAGCCAAGTGCAAGCCGGTGACAGTCACCGGTGCCCCGACCAGCAGGGTGACCTTGGCGGGAAG] consensusID : consensus_1635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 343 fasta sequence [TGGAGGATCCAGGATCTGACAGAGAGTCCAGCAACACAAGATGGGAAGGATCCTGAGTGCCAGCATCGTCGCGGTTGCAATGTTGGTCGTAGTCAACTCGCTGACGTGGAGCCAGTGCACATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACCAGCGTTTGCTTCACTGGAAAAGCGACGTTCCCATCCATCTCCAACTCCGTGGGCTGTAACATGCAGGGCTGCAGATAGACGACCGGATGCATCACCACGACGATCGGAACCATCCTGGGGGTCACGTACGAGACCAAACTGGTCTGCTGCTCGACAGTCGTGTGG] [+] EMBL FR0056537 [TGGAGGATCCAGGATCTGACAGAGAGTCCAGCAACACAAGATGGGAAGGATCCTGAGTGCCAGCATCGTCGCGGTTGCAATGTTGGTCGTAGTCAACTCGCTGACGTGGAGCCAGTGCACATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACCAGCGTTTGCTTCACTGGAAAAGCGACGTTCCCATCCATCTCCAACTCCGTGGGCTGTAACATGCAGGGCTGCAGATAGACGACCGGATGCATCACCACGACGATCGGAACCATCCTGGGGGTCACGTACGAGACCAAACTGGTCTGCTGCTCGACAGTCGTGTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1635#0 ------------------------------GCAACACAAGATGGCAAAGATCCTGAGTGC 30 consensus_1635#1 TGGAGGATCCAGGATCTGACAGAGAGTCCAGCAACACAAGATGGGAAGGATCCTGAGTGC 60 ************** ** ************ consensus_1635#0 CACCATCGTCGCGGCTGCATTGTTGGTCGTAGTCAACTCGCTGACGTGCAACCAGTGCAA 90 consensus_1635#1 CAGCATCGTCGCGGTTGCAATGTTGGTCGTAGTCAACTCGCTGACGTGGAGCCAGTGCAC 120 ** *********** **** **************************** * ******** consensus_1635#0 ATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACGAG 150 consensus_1635#1 ATACGGCTTGGCAGGGTTCTGCCTCAGCAATTCTGAAGTGATGTGCTCGACCAATACCAG 180 ********************************************************* ** consensus_1635#0 CGTGTTGCTTCACTGGAAAAGCGACGTTCGCATCCATCTCCAGCTCCGTGGGCTTCAACA 210 consensus_1635#1 CGT-TTGCTTCACTGGAAAAGCGACGTTCCCATCCATCTCCAACTCCGTGGGCTGTAACA 239 *** ************************* ************ *********** **** consensus_1635#0 TGCAGGGCTGCAGAGAGCCGACCGGGTGCAGCAGCACCACCAACGGAACCATCCTGGGGG 270 consensus_1635#1 TGCAGGGCTGCAGATAGACGACCGGATGCATCACCACGACGATCGGAACCATCCTGGGGG 299 ************** ** ******* **** ** *** ** * ***************** consensus_1635#0 TCACCTACGAGAGCACTCCTGGCCTGCTGCTCCACAGCCAAGTGCAAGCCGGTGACAGTC 330 consensus_1635#1 TCACGTACGAGACCAAAC-TGGTCTGCTGCTCGACAGTCGTGTGG--------------- 343 **** ******* ** * *** ********* **** * *** consensus_1635#0 ACCGGTGCCCCGACCAGCAGGGTGACCTTGGCGGGAAG 368 consensus_1635#1 -------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |