These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1677#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 596 fasta sequence [TTGCTGGCTCTGCTCTCCGTTGGCTTGTGCGAGGAGAAGACGTTTCTGCAGCGTGCTGGCACAGCCTTCAACAGCAGATCCTACAAATCCATCCTCAGCGTCACCAATGGAGAGAAGTTTGGAGACTGGACATGGCCCGAGATGAGTCCTGAAACCTTCTACGCAGTTGGCTTCAGTCTCAGGGTGGAGTCCAACCAGTTTGGCATGGACGATACCGCCCTGAACGGCATCCGCCTCATTTGTGCCCAAGACGGGGACAGAAGCTTCCTGTACTCCATTGAATCTCACACTGGCTACTTTGGTGAGTGGTCCCACAGCATGTACTGCCCCTCCGGCTACCTCACCTCCTTCCAGATCCGCGTGGAGCCCCATCAGGGTCTGTTCGGCGACGACACGGCGGTCAACAACATCAAGTTCCGCTGCAGCAGCAACCCGATGCTGGAGGGACCCGGCATGTCCTGGGGGGAGTACGGCCAGTGGAGCCAGGAATGCCAGGACGNGGGGATCTGTGGTATTGAGAGCAAGATGGAGGCGTACCAGTACGGCCTTGACGACAGCACCCTCAACGACGTCCGCTTCCACTGGTGCTCCGTGCC] [+] EMBL FR0057914 [TTGCTGGCTCTGCTCTCCGTTGGCTTGTGCGAGGAGAAGACGTTTCTGCAGCGTGCTGGCACAGCCTTCAACAGCAGATCCTACAAATCCATCCTCAGCGTCACCAATGGAGAGAAGTTTGGAGACTGGACATGGCCCGAGATGTGTCCTGAAACCTTCTACGCAGTTGGCTTCAGTCTCAGGGTGGAGTCCAACCAGTTTGGCATGGACGATACCGCCCTGAACGGCATCCGCCTCATTTGTGCCCAAGACGGAGACAGAAGCTTCCTGTACTCCATTGAATCTCACACTGGCTACTTTGGTGAGTGGTCCCACAGCATGTACTGCCCCTCCGGCTACCTCACCTCCTTCCAGATCCGCGTGGAGCCCCATCAGGGTCTGTTCGGCGACGACACGGCGGTCAACAACATCAAGTTCCGCTGCAGCAGCAACCCGATGCTGGAGGGACCCGGCATGTCCTGGGGGGAGTACGGCCAGTGGAGCCAGGAATGCCAGGACGNGGGGATCTGTGGTATTGAGAGCAAGAT ] [+] EMBL FR0057856 [ ATGAGTCCTGAAACCTTCTACGCAGTTGGCTTCAGTCTCAGGGTGGAGTCCAACCAGTTTGGCATGGACGATACCGCCCTGAACGGCATCCGCCTCATTTGTGCCCAAGACGGGGACAGAAGCTTCCTGTACTCCATTGAATCTCACACTGGCTACTTTGGTGAGTGGTCCCACAGCATGTACTGCCCCTCCGGCTACCTCACCTCCTTCCAGATCCGCGTGGAGCCCCATCAGGGTCTGTTCGGCGACGACACGGCGGTCAACAACATCAAGTTCCGCTGCAGCAGCAACCCGATGCTGGAGGGACCCGGCATGTCCTGGGGGGAGTACGGCCAGTGGAGCCAGGAATGCCAGGACGGGGGGATCTGTGGTATTGAGAGCAAGATGGAGGCGTACCAGTACGGCCTTGACGACAGCACCCTCAACGACGTCCGCTTCCACTGGTGCTCCGTGCC] consensusID : consensus_1677#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 169 fasta sequence [AGCACCCTCAACGACGTCCGCTTCCACTGCTGCTCCGTGCCACAGAAGGTGGGAGGGACGGCTGATTAGGAAGATGTGAGCAGCGGTTCAATGTCAGAGAGGTGAGCAGCGTGATCCAGGCTACGACAATCAGCCGTAACCAAGAAAAAGAACCTTTTTTATAAGGAAA] [+] EMBL CA330983 [AGCACCCTCAACGACGTCCGCTTCCACTGCTGCTCCGTGCCACAGAAGGTGGGAGGGACGGCTGATTAGGAAGATGTGAGCAGCGGTTCAATGTCAGAGAGGTGAGCAGCGTGATCCAGGCTACGACAATCAGCCGTAACCAAGAAAAAGAACCTTTTTTATAAGGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1677#0 TTGCTGGCTCTGCTCTCCGTTGGCTTGTGCGAGGAGAAGACGTTTCTGCAGCGTGCTGGC 60 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 ACAGCCTTCAACAGCAGATCCTACAAATCCATCCTCAGCGTCACCAATGGAGAGAAGTTT 120 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 GGAGACTGGACATGGCCCGAGATGAGTCCTGAAACCTTCTACGCAGTTGGCTTCAGTCTC 180 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 AGGGTGGAGTCCAACCAGTTTGGCATGGACGATACCGCCCTGAACGGCATCCGCCTCATT 240 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 TGTGCCCAAGACGGGGACAGAAGCTTCCTGTACTCCATTGAATCTCACACTGGCTACTTT 300 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 GGTGAGTGGTCCCACAGCATGTACTGCCCCTCCGGCTACCTCACCTCCTTCCAGATCCGC 360 consensus_1677#1 ------------------------------------------------------------ consensus_1677#0 GTGGAGCCCCATCAGGGTCTGTTCGGCGACGACACGGCGGTCAACAACATCAAGTTCCGC 420 consensus_1677#1 ---------------------------------AGCACCCTCAACGACGTCCGCTTCCAC 27 * * ***** ** ** **** * consensus_1677#0 TGCAGCAGCAACCCGATGCTGGAGGGACCCGGCATGTCCTGGGGGGAGTACGGCCAGTGG 480 consensus_1677#1 TGCTGCTCCGTGCCACAGAAGGTGGGAGG-GACGGCTGATTAGGAAGATGTGAGCAGCGG 86 *** ** * ** * ** **** * * * * ** * * *** ** consensus_1677#0 AGCCAGGAATGCCAGGACGNGGGGATCTGTGGTATTGAGAGCAAGATGGAGGCGTACCAG 540 consensus_1677#1 TTC----AATGTCAGAGAGGTGAGCAGCGTGATCCAGGCTACGACAATCAGCCGTAACCA 142 * **** *** * * * *** * * * * * ** **** * consensus_1677#0 TACGGCCTTGACGACAGCACCCTCAACGACGTCCGCTTCCACTGGTGCTCCGTGCC 596 consensus_1677#1 AGAAA----AAGAACCTTTTTTATAAGGAAA------------------------- 169 * ** ** ** |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |