Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1773 cluster # 1773       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1773#0 length = 961 sequences # 3  

consensusID : consensus_1773#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 961
fasta sequence
                              [ACAAGGTCCGGCGACGGCGGCTGAGGTGCACCAGATCTTGAAACAGAAAAACATGGCAGAAAAGTTTCCTCTTTTCACGGCTGTTTACCAGATCTGCTTTAATGGCCATCCCGTCACGGAGTTCATTAAGTGCTTGCAGGACCACCCGGAACACATGTAAGGGGAATGACAAAAGGGGAAAAGACTTTCATACAGAGCCACTCTTGTTGCAGCCAACTCTGTTACACCAGTTTGACTATTGACACCTGTGGATCTCAAATGGAGCTGAGCTGCTGTTCCAACCACATTTCCACTACTGCTGAAGGAGTAGCCACCATTTTGAATGTCATCAAAAGATGTCAAAATTTCCGCAGTCCCAAACATGGCGCCCCGGGAGCTATCGGCTTTGGAGAAATTTCTTGGCTTAAAAAAGCCTCACAAGTATAGCACGCAAGGAGTTA-AAAAGGTACCTGTGCTCCAGATTAACAGTGGTCCTCCTTTGGTTGGACTGGGGACCATTGCCTGTCATCTCGTGAAAGAAGCCAAGCGCCCAGATCTGCTCGGAGATTCTGCTGAGAGCAGAGCCGTGGTGCAGCAGTGGATAGAACACAGAGTCACCAAGTTGGATCGCTGTAGGAAGGACGATGTTAAAACGTTTCTGAAGGACCTTGACCATTACCTGCAGGACATGGGCTATCTGGCTGGCAACCACTTCACCTTAGCAGATATTCCTATTTACTACGGAATCCACCCATTCATGGGGGACATGGCCATCCACGAGAAGGAGCAGTTTATCAATGTGACAAGATGGTTCGATCATGTCCAGCACTACCCTGGTGTCCAGCACCACCTTCCCCTCGTAACGGTACTGAGGAACAGAATTTACACCAGCAGGCACCACTGATACTGGACCGTAGCTGAATCACCACAACGTTTCGCACCAGAACTGCCCTTTTATTAACCGCATCATCCAGTCTTATCA]

[+] EMBL BU806811             [ACAAGGTCCGGCGACGGCGGCTGAGGTGCACCAGATCTTGAAACAGAAAAACATGGCAGAAAAGTTTCCTCTTTTCACGGCTGTTTACCAGATCTGCTTTAATGGCCATCCCGTCACGGAGTTCATTAAGTGCTTGCAGGACCACCCGGAACACATGTAAGGGGAATGACAAAAGGGGAAAAGACTTTCATACAGAGCCACTCTTGTTGCAGCCAACTCTGTTACACCAGTTTGACTATTGACACCTGTGGATCTCAAATGGAGCTGAGCTGCTGTTCCAACCACATTTCCACTACTGCTGAAGGAGTAGCCACCATTTTGAATGTCATCAAAAGATGTCAAAATTTCCGCAGTCCCAAACATGGCGCCCCGGGAGCTATCGGCTTTGGAGAAATTTCTTGGCTTAAAAAAGCCTCACAAGTATAGCACGCAAGGAGTTA AAAAGGTACCTGTGCTCCAGATTAACAGTGGTCCTCCTTTGGTTGGACTGGGGACCATTGCCTGTCATCTCGTGAAAGAAGCCAAGCGCCCAGATCTGCTCGGAGATTCTGCTGAGAGCAGAGCCGTGGTGCAGCAGTGGATAGAACACAGAGTCACCAAGTTGGATCGCTGTAGGAAGGACGATGTTAAAACGTTT                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BU806969             [                                                                                                                                                                                                                                                                                                                                                                                CCCGGGAGCTATCGGCTTTGGAGAAATTTCTTGGCTTAAAAAAGCCTCACAAGTATAGCACGCAAGGAGTTA AAAAGGTACCTGTGCTCCAGATTAACAGTGGTCCTCCTTTGGTTGGACTGGGGACCATTGCCTGTCATCTCGTGAAAGAAGCCAAGCGCCCAGATCTGCTCGGAGATTCTGCTGAGAGCAGAGCCGTGGTGCAGCAGTGGATAGAACACAGAGTCACCAAGTTGGATCGCTGTAGGAAGGACGATGTTAAAACGTTTCTGAAGGACCTTGACCATTACCTGCAGGACATGGTCTATCTGGCTGGCAACCACTTCACCTTAGCAGATATTCTTATTTACTACGGAATCCACCCATTCATGGTGGACATGGCCATCCACGAGAAGGAGCAGTTTATCAATGTGACAAGATGGTTCGATCATGTCCAGCACTACCCTGGTGTCCAGCACCACCTTCCCCTCGTAACGGTACTGAGGAACAGAATTTACACCAGCAGGCACCACTGATACTGGACCGTAGCTGAATCACCACAACGTTTCGCACCAGAACTGCCCTTTTATTAACCGCATCATCCAGTCTTATCA]
[+] EMBL FR0063658            [                                                                                                                                                                                                                                                                                                                                                                                                 TTGGAGAAATTTCTTGGCTTAAAAAAGCCTCACAAGTATAGCACGCAAGGAGTTAGGGGAGGTACCTGTGCTCCAGATTAACAGTGGTCCTCCTTTGGTTGGACTGGGGACCATTGCCTGTCATCTCGTGAAAGAAGCCAAGCGCCCAGATCTGCTCGGAGATTCTGCTGAGAGCAGAGCCGTGGTGCAGCAGTGGATAGAACACAGAGTCACCAAGTTGGATCGCTGTAGGAAGGACGATGTTAAAACGTTTCTGAAGGACCTTGACCATTACCTGCAGGACATGGGCTATCTGGCTGGCAACCACTTCACCTTAGCAGATATTCCTATTTACTACGGAATCCACCCATTCATGGGGGA                                                                                                                                                                                                                         ]


>consensus_1773#0 ACAAGGTCCGGCGACGGCGGCTGAGGTGCACCAGATCTTGAAACAGAAAAACATGGCAGA AAAGTTTCCTCTTTTCACGGCTGTTTACCAGATCTGCTTTAATGGCCATCCCGTCACGGA GTTCATTAAGTGCTTGCAGGACCACCCGGAACACATGTAAGGGGAATGACAAAAGGGGAA AAGACTTTCATACAGAGCCACTCTTGTTGCAGCCAACTCTGTTACACCAGTTTGACTATT GACACCTGTGGATCTCAAATGGAGCTGAGCTGCTGTTCCAACCACATTTCCACTACTGCT GAAGGAGTAGCCACCATTTTGAATGTCATCAAAAGATGTCAAAATTTCCGCAGTCCCAAA CATGGCGCCCCGGGAGCTATCGGCTTTGGAGAAATTTCTTGGCTTAAAAAAGCCTCACAA GTATAGCACGCAAGGAGTTAAAAAGGTACCTGTGCTCCAGATTAACAGTGGTCCTCCTTT GGTTGGACTGGGGACCATTGCCTGTCATCTCGTGAAAGAAGCCAAGCGCCCAGATCTGCT CGGAGATTCTGCTGAGAGCAGAGCCGTGGTGCAGCAGTGGATAGAACACAGAGTCACCAA GTTGGATCGCTGTAGGAAGGACGATGTTAAAACGTTTCTGAAGGACCTTGACCATTACCT GCAGGACATGGGCTATCTGGCTGGCAACCACTTCACCTTAGCAGATATTCCTATTTACTA CGGAATCCACCCATTCATGGGGGACATGGCCATCCACGAGAAGGAGCAGTTTATCAATGT GACAAGATGGTTCGATCATGTCCAGCACTACCCTGGTGTCCAGCACCACCTTCCCCTCGT AACGGTACTGAGGAACAGAATTTACACCAGCAGGCACCACTGATACTGGACCGTAGCTGA ATCACCACAACGTTTCGCACCAGAACTGCCCTTTTATTAACCGCATCATCCAGTCTTATC A



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)