Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1917 cluster # 1917       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1917#0 length = 613 sequences # 3  
consensusID : consensus_1917#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 613
fasta sequence 
                              [ATGGGCTTAAATACTCACGCAGCTCGATTTCTCTCGGATCAAATCAAAATTCAGCTCTCACACAAGCTAACAAGCTGCCAGATAAAAGAACAATCTACAACCTCTGACCTCCACAATGGAAAGTCTGTATGAGATATTGGACCACTTCTTCGGCTTGGATCCCGTTCACCGGCAGCTTTTGGTCGGTTCCGCTTTGGCAGTAGGAGGCATACTAGCGTATTTACTACTCAGAAGAAAGCCAGTCAAAAGTATTCCAGTCGGGGAAGGATGGTGGGGAGCAGGAGAGAAGCCACAGTCGGAGGATGAGAGCATTCGCCCCTTCACAGTGGAAACATCAGATAAAGAAATTGAGGACCTCCACGGGCGCATTGATGGAAGCCGGTACACCGATCCTTTGGAAGGTAGCGCCTTCCAGTATGGCTTCAATTCCACTTACCTCAAGAAAGTGGTTTCATACTGGAAAAATGAGTTTGACTGGAAGAAGCAGGTGGCAGTTCTTAACAAATATCCACACTACAAAACTAAAATTGAAGGATTGGACGTGCACTTCATCCATGTGCGGCCGACAAGCCGCCCAAACCAGCGGGTTCTTCCCATCATGCTGGTTCACGGC]

[+] EMBL BU806129             [ATGGGCTTAAATACTCACGCAGCTCGATTTCTCTCGGATCAAATCAAAATTCAGCTCTCACACAAGCTAACAAGCTGCCAGATAAAAGAACAATCTACAACCTCTGACCTCCACAATGGAAAGTCTGTATGAGATATTGGACCACTTCTTCGGCTTGGATCCCGTTCACCGGCAGCTTTTGGTCGGTTCCGCTTTGGCAGTAGGAGGCATACTAGCGTATTTACTACTCAGAAGAAAGCCAGTCAAAAGTATTCCAGTCGGGGAAGGATGGTGGGGAGCAGGAGAGAAGCCACAGTCGGAGGATGAGAGCATTCGCCCCTTCACAGTGGAAACATCAGATAAAGAAATTGAGGACCTCCACGGGCGCATTGATGGAAGCCGGTACACCGATCCTTTGGAAGGTAGCGCCTTCCAGTATGGCTTCAATTCCACTTACCTCAAGAAAGTGGTTTCATACTGGAAAAATGAGTTTGACTGGAAGAAGCAGGTGGCAGTTCTTAACAAATATCCACACTACAAAACTAAAATTGAAGGATTGGACGTGCACTTCATCCATGTGCGGCCGACAAGCCGCCCAAACCAGCGGGTTCTTC                    ]
[+] EMBL BU805586             [    GCTTAAATACTCACGCAGCTCGATTTCTCTCGGATCAAATCAAAATTCAGCTCTCACACAAGCTAACAAGCTGCCAGATAAAAGAACAATCTACAACCTCTGACCTCCACAATGGAAAGTCTGTATGAGATATTGGACCACTTCTTCGGCTTGGATCCCGTTCACTGGCAGCTTTTGGTCGGTTCCGCTTTGGCAGTAGGAGGCATACTAGCGTATTTACTACTCAGAAGAAAGCCAGTCAAAAGTATTCCAGTCGGGGAAGGATGGTGGGGAGCAGGAGAGAAGCCACAGTCGGAGGATGAGAGCATTCGCCCCTTCACAGTGGAAACATCAGATAAAGAAATTGAGGACCTCCACGGGCGCATTGATGGAAGCCGGTACACCGATCCTTTGGAAGGTAGCGCCTTCCAGTATGGCTTCAATTCCACTTACCTCAAGAAAGTGGTTTCATACTGGAAAAATGAGTTTGACTGGAAGAAGCAGGTGGCAGTTCTTAACAAATATCCACACTACAAAACTAAAATTGAAGGATTGGACGTGCACTTCATCCATGTGCGGCCGACAAGCCGCCCAAACCAGCGGGTTCTTCCCATCATGCTGGTTCACGGC]
[+] EMBL FR0063978            [     CTTAAATACTCACGCAGCTCGATTTCTCTCGGATCAAATCAAAATTCAGCTCTCACACAAGCTAGCAAGCTGCCAGATAAAAGAACAATCTACAACCTCTGACCTCCACAATGGAAAGTCTGTATGAGATATTGGACCACTTCTTCGGCTTGGATCCCGTTCACCGGCAGCTTTTGGTCGGTTCCGCTTTGGCAGTAGGAGGCATACTAGCGTATTTACTGCTCAGAAGAAAGCCAGTCAAAAGTATTCCAGTCGGGGAAGGATGGTGGGGAGCAGGAGAGAAGCCACAGTCGGAGGATGAGAGCATTCGCCCCTTCACAGTGGAAACATCAGATAAAGAAATTGAGGACCTCCACGGGCGCATTGATGGAAGCC                                                                                                                                                                                                                                         ]




>consensus_1917#0
ATGGGCTTAAATACTCACGCAGCTCGATTTCTCTCGGATCAAATCAAAATTCAGCTCTCA
CACAAGCTAACAAGCTGCCAGATAAAAGAACAATCTACAACCTCTGACCTCCACAATGGA
AAGTCTGTATGAGATATTGGACCACTTCTTCGGCTTGGATCCCGTTCACCGGCAGCTTTT
GGTCGGTTCCGCTTTGGCAGTAGGAGGCATACTAGCGTATTTACTACTCAGAAGAAAGCC
AGTCAAAAGTATTCCAGTCGGGGAAGGATGGTGGGGAGCAGGAGAGAAGCCACAGTCGGA
GGATGAGAGCATTCGCCCCTTCACAGTGGAAACATCAGATAAAGAAATTGAGGACCTCCA
CGGGCGCATTGATGGAAGCCGGTACACCGATCCTTTGGAAGGTAGCGCCTTCCAGTATGG
CTTCAATTCCACTTACCTCAAGAAAGTGGTTTCATACTGGAAAAATGAGTTTGACTGGAA
GAAGCAGGTGGCAGTTCTTAACAAATATCCACACTACAAAACTAAAATTGAAGGATTGGA
CGTGCACTTCATCCATGTGCGGCCGACAAGCCGCCCAAACCAGCGGGTTCTTCCCATCAT
GCTGGTTCACGGC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)