Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2012 cluster # 2012       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2012#0 length = 602 sequences # 4  

consensusID : consensus_2012#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 602
fasta sequence
                              [CCACCTGAGTTCTACCGTCTACCGGAGTCGGTTCGGCTGCACCGGTTTACTTTGAAAACACTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGATGATCCGAGCCATCAGGTCAGCAAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGGAGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACCTGGCTAAGCTGCTCTACGTGCACATGTTGGGTTATCCCGCCCACTTTGGTCAGATGGAGTGCGTTCGGATGATAGCCAGCCCTCGCTACAGCGAGAAACGCATAGGATACCTCGGAGCCATGATGCTTCTGGATGAGAAGCAGGATGCCAGTCTGCTCATTACCAACTCCATCAAGAATGACCTCTTCCACAGTAACCAGTACATCCAGTCTCTGGCTCTGTGCACCCTGGCCTGTATGGGTTCTGCTGAGATGTGCAGAGATTTGGCTCCGGAGATTGAGCGGCTGCTCCGAGCATCCAACTCCTACGTGAAGAAGAAGGCTGCTCTTTGTGCGGTTCACATCGTGAGGAAGGTCCCGGAT]

[+] EMBL CA589083             [CCACCTGAGTTCTACCGTCTACCGGAGTCGGTTCGGCTGCACCGGTTTACTTTGAAAACACTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGATGATCCGAGCCATCAGGTCAGCAAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGGAGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACCTGGCTAAGCTGCTCTACGTGCACATGTTGGGTTATCCCGCCCACTTTGGTCAGATGGAGTGCGTTCGGATGATAGCCAGCCCTCGCTACAGCGAGAAACGCATAGGATACCTCGGAGCCATGATGCTTCTGGATGAGAAGCAGGATGCCAGTCTGCTCATTACCAACTCCATCAAGAATGACCTCTTCCACAGTAACCAGTACATCCAGTCTCTGGCTCTGTGCACCCTGGCCTGTATGGGTTCTGCTGAGATGTGCAGAGATTTGGCTCCGGAGATTGAGCGGCTGCTCCGAGCATCCAACTCCTACGTGAAGAAGAAGGCTGCTCTTTGTGCGGTTCACATCGTGAGGAAGGTCCCGGAT]
[+] EMBL CA589175             [    CTGAGTTCTACCGTCTACCGGAGTCGGTTCGGCTGCACCGGTTTACTTTGAAAACACTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGATGATCCGAGCCATCAGGTCAGCGAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGGAGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACCTGGCTAAGCTGCTCTACGTGCACATGTTGGGTTATCCCGCCCACTTTGGTCAGATGGAGTGCGTTCGGATGATAGCCAGCCCTCGCTACAGCGAGAAACGCATAGGATACCTCGGAGCCATGATGCTTCTGGATGAGAAGCAGGATGCCAGTCTGCTCATTACCAACTCCATCAAGAATGACCTCTTCCACAGTAACCAGTACATCCAGTCTCTGGCTCT                                                                                                                                              ]
[+] EMBL FR0058961            [                                                        AACACTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGATGATCCGAGCCATCAGGTCAGCAAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGGAGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACCTGGCTAAGCTGCTCTACGGGCACATGTTG                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0058970            [                                                         ACACTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGATGATCCGAGCCATCAGGTCAGCAAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGGAGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACCTGGCTAAGCTGCTCTACGTGCACATGTTGGGGTATCCCGCCCACTTTGGTCAGATGGAGTGCGTTCGGATGATAGCCAGCCCTCGCTACAGCGAGAAACGCATAGGATACCTCGGAGCCATGATGCTTCTGGATG                                                                                                                                                                                                                                   ]


>consensus_2012#0 CCACCTGAGTTCTACCGTCTACCGGAGTCGGTTCGGCTGCACCGGTTTACTTTGAAAACA CTGGCGAGTGTCGGAACACTATAGAGAGAGCCATGTCTCCATCAGTACCTCTGCAGGAGA TGATCCGAGCCATCAGGTCAGCAAAGACCCAGTGTGAGGAGCGGGGTGTGATCCAGAGGG AGTGTGCAGCCATCCGGGCGCAGTTTCGACAGTCCGACAATGGAGGCCGATCACACAACC TGGCTAAGCTGCTCTACGTGCACATGTTGGGTTATCCCGCCCACTTTGGTCAGATGGAGT GCGTTCGGATGATAGCCAGCCCTCGCTACAGCGAGAAACGCATAGGATACCTCGGAGCCA TGATGCTTCTGGATGAGAAGCAGGATGCCAGTCTGCTCATTACCAACTCCATCAAGAATG ACCTCTTCCACAGTAACCAGTACATCCAGTCTCTGGCTCTGTGCACCCTGGCCTGTATGG GTTCTGCTGAGATGTGCAGAGATTTGGCTCCGGAGATTGAGCGGCTGCTCCGAGCATCCA ACTCCTACGTGAAGAAGAAGGCTGCTCTTTGTGCGGTTCACATCGTGAGGAAGGTCCCGG AT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)