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Takifugu rubripes
cluster # 2025 cluster # 2025       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2025#0 length = 576 sequences # 3  
 consensus_2025#1 length = 211 sequences # 1  
consensusID : consensus_2025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 576
fasta sequence 
                              [CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCAGGGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA]

[+] EMBL CA846260             [CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCATTGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGGCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCA                              ]
[+] EMBL CA589289             [                             GCGAGCGCCAGGTAGCCCAGGGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCA                              ]
[+] EMBL CA845849             [                                                                                                             cATGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA]




>consensus_2025#0
CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCAGGGAAGGTCACC
TGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGT
TCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGT
GGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCAT
AGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAA
ATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTC
TTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGG
AGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCA
GCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTG
TTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA

consensusID : consensus_2025#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 211
fasta sequence 
                              [TCCTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAGGAAGCGAGGAAGCAGCGTGAGCGCCAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAAA]

[+] EMBL FR0059873            [TCCTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAGGAAGCGAGGAAGCAGCGTGAGCGCCAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAAA]




>consensus_2025#1
TCCTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAGGAAGCGAGGAAGCAGCG
TGAGCGCCAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCG
GACCTGGATTCACCTGATAAGGCGAGTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGG
AGTCACACCTGTCCAGTGGATGGCATGTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2025#0      CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCAGGGAAGGTCACC 60
consensus_2025#1      ----------------------------------------------------------TC 2
                                                                                 *

consensus_2025#0      TGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGT 120
consensus_2025#1      CTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAG---GAAGCGAGGAAGCAGC 59
                        *   *  * *  **** ****      *   ***    *   ***** * ** *  * 

consensus_2025#0      TCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGT 180
consensus_2025#1      GTGAG-----------------------------CGCCAGTTACGGTTGAACGTGTCCGT 90
                        **                              * * **********************

consensus_2025#0      GGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCAT 240
consensus_2025#1      GGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCAT 150
                      **************************************** **********     ****

consensus_2025#0      AGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAA 300
consensus_2025#1      AGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAA 210
                      ********************************************************* **

consensus_2025#0      ATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTC 360
consensus_2025#1      A----------------------------------------------------------- 211
                      *                                                           

consensus_2025#0      TTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGG 420
consensus_2025#1      ------------------------------------------------------------
                                                                                  

consensus_2025#0      AGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCA 480
consensus_2025#1      ------------------------------------------------------------
                                                                                  

consensus_2025#0      GCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTG 540
consensus_2025#1      ------------------------------------------------------------
                                                                                  

consensus_2025#0      TTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA 576
consensus_2025#1      ------------------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)