These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 576 fasta sequence [CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCAGGGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA] [+] EMBL CA846260 [CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCATTGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGGCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCA ] [+] EMBL CA589289 [ GCGAGCGCCAGGTAGCCCAGGGAAGGTCACCTGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCA ] [+] EMBL CA845849 [ cATGATGTTGTTCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAAATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTCTTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGGAGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCAGCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTGTTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA] consensusID : consensus_2025#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 211 fasta sequence [TCCTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAGGAAGCGAGGAAGCAGCGTGAGCGCCAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAAA] [+] EMBL FR0059873 [TCCTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAGGAAGCGAGGAAGCAGCGTGAGCGCCAGTTACGGTTGAACGTGTCCGTGGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCATAGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2025#0 CATCTGTTAACAGGAAGCGAGGAAGCAGCGCGAGCGCCAGGTAGCCCAGGGAAGGTCACC 60 consensus_2025#1 ----------------------------------------------------------TC 2 * consensus_2025#0 TGGTCTTTGCGGGGCGGACCAGTTTCAAAAATGGACTTTCGATAGAAGCAAAGATGTTGT 120 consensus_2025#1 CTGCGCTCCCTGCACGGATCAGTGCGCGCAGGTGACAACAG---GAAGCGAGGAAGCAGC 59 * * * * **** **** * *** * ***** * ** * * consensus_2025#0 TCGACTTTATCGTGGTTTTTTTTCTCTCCTCCTTCTCAAGTTACGGTTGAACGTGTCCGT 180 consensus_2025#1 GTGAG-----------------------------CGCCAGTTACGGTTGAACGTGTCCGT 90 ** * * ********************** consensus_2025#0 GGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTTACCTGATAAGCGAGTTCAT 240 consensus_2025#1 GGCGACCTCAGGCACGAAGGGGAAGACTCGGACCTGGATTCACCTGATAAGGCGAGTCAT 150 **************************************** ********** **** consensus_2025#0 AGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGCAA 300 consensus_2025#1 AGTCACGGCAGAAAAGGCTGAAACCAGTGGAGTCACACCTGTCCAGTGGATGGCATGTAA 210 ********************************************************* ** consensus_2025#0 ATCCCAGACTTACCTGAGAGGCCGTGTCTGAATGGCGCCCTAGACCTTCTCCTCCACCTC 360 consensus_2025#1 A----------------------------------------------------------- 211 * consensus_2025#0 TTCTCTGCAGCCCGTCGAGACTAAAACAACCCGACATGGACACGCTGACGGACGACACGG 420 consensus_2025#1 ------------------------------------------------------------ consensus_2025#0 AGGGATGCTACTTCAACCGCTCCGTCAAGTTCTTCTATGAATCCAGCGGGAAGAACATCA 480 consensus_2025#1 ------------------------------------------------------------ consensus_2025#0 GCGACCACTGGCGTAAACGGGACTACACCATCGTCTCTCTGGGCATGGCCGTCTGCTTTG 540 consensus_2025#1 ------------------------------------------------------------ consensus_2025#0 TTGTCATCTTCTCCAACATTTTGGTCATAGCTGCCA 576 consensus_2025#1 ------------------------------------ |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |