Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2040 cluster # 2040       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2040#0 length = 691 sequences # 4  

consensusID : consensus_2040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 691
fasta sequence
                              [GCGCTGCGCGGAGTCAGAGGGTTTATTTAACTCGTCGCTCTGTTCTCCCCCACTTTCCCAACGCGCCACCGAAAGGGTTTGTCGTCCTTCTGCGGCGGGACCACGGCGTGGAAGTCGCGGGGACTTCACGAGAGCCCAAAATAACCTTGAGGAGAAGCGGGACGAGAGTCAAAATTTGGAATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGATTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGACAAAAGGCACCTTGACTTTGATCGCGTCGTTGGGCTACAGAGAATGGAGAGAATTCCGAGCGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGATTTCCCGATGTATGTTTATAAACCCAGGCGAGGGTTGAAGCGAGGAGAAGAGAACAAGGAGACCTACAAGCTGCCTCACAGGCTTATCGAGAAGAAAAGGCGTGACCGGATAAACGAGTGCATAGCTCAGCTGAAAGACTTACTGCCGGAGCACCTGAAACTCACGACTCTGGGACATCTGGAGAAGGCCGTGGTCTTAGAGCTGACTCTGAAACACGTGAAAGCCCTCACCTCCCTCCTGGAACAGCAGCAGCAGAAAATTCTGGCCCTG]

[+] EMBL CA591151             [GCGCTGCGCGGAGTCAGAGGGTTTATTTAACTCGTCGCTCTGTTCTCCCCCACTTTCCTAACGCGCCACCGAAAGGGTTTGTCGTCCTTCTGCGGCGGGACCACGGCGTGGAAGTCGCGGGGACTTCACGAGAGCCCAAAATAACCTTGAGGAGAAGCGGGACGAGAGTCAAGATTTGGAATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGATTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGACAAAAGGCACCTTGACTTTGATCGCGTCGTTGGGCTACAGAGAATGGAGAGAATTCCGAGCGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGATTTCCCGATGTATGTTTACAAACCCAGGCGAGGGTTGAAGC                                                                                                                                                                                                                                      ]
[+] EMBL CA589830             [         GGAGTCAGAGGGTTTATTTAACTCGTCGCTCTGTTCTCCCCCACTTTCCCAACGCGCCACCGAAAGGGTTCGTCGTCCTTCTGCGGCGGGACCACGGCGTGGAAGTCGCGGGGACTTCACGAGAGCCCAAAATAACCTTGAGGAGAAGCGGGACGAGAGTCGAAATTTGGAATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGATTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGACAAAAGGCACCTTGACTTTGATCGCGTCGTTGGGCTACAGAGAATGGAGAGAATTCCGAGCGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGATTTCCCGATGTATGTTTATAAACCCAGGCGAGGGTTGAA                                                                                                                                                                                                                                        ]
[+] EMBL CA589805             [                                                                  CACCGAAAGGGTTTGTCGTCCTTCTGCGGCGGGACCACGGCGTGGAAGTCGCGGGGACTTCACGAGAGCCCAAAATAACCTTGAGGAGAAGCGGGACGAGAGTCAAAATTTGGAATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGATTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGACAAAAGGCACCTTGACTTTGATCGCGTCGTTGGGCTACAGAGAATGGAGAGAATTCCGAGCGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGATTTCCCGATGTATGTTTATAAACCCAGGCGAGGGTTGAAGCGAGGAGAAGAGAACAAGGAGACCTACAAGCTGCCTCACAGGCTTATCGAGAAGAAAAGGCGTGACCGGATAAACGAGTGCATAGCTCAGCTGAAAGACTTACTGCCGGAGCACCTGAAACTCACGACTCTGGGACATCTGGAGAAGGCCGTGGTCTTAGAGCTGACTCTGAAACACGTGAAAGCCCTCACCTCCCTCCTGGAACAGCAGCAGCAGAAAATTCTGGCCCTG]
[+] EMBL FR0059139            [                                                                                                                                               ACGTTGAGGAGAAGCGGGACGAGAGTCAAAATTTGGAATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGATTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGACAAAAGGCACCTTGACTTTGATCGCGTCGGTGGGCTACAGAGAATGGAGAGAATTCCGAGCGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGATTTCCCGATGTATGTTTATAAACCCAGGCGAGGGTTGAAGCGAGGAGAAGA                                                                                                                                                                                                                            ]


>consensus_2040#0 GCGCTGCGCGGAGTCAGAGGGTTTATTTAACTCGTCGCTCTGTTCTCCCCCACTTTCCCA ACGCGCCACCGAAAGGGTTTGTCGTCCTTCTGCGGCGGGACCACGGCGTGGAAGTCGCGG GGACTTCACGAGAGCCCAAAATAACCTTGAGGAGAAGCGGGACGAGAGTCAAAATTTGGA ATTTCATCCAAAAATCGAGGGTTTTCTTTTGTTGAGCGAATTTTGAGCGCGTTATACTGA TTGCGGGGTTTGGTACCTGCGAGGCTCCAGTAAATGCGCATTTCTTTGCGAGCGCACCGA CAAAAGGCACCTTGACTTTGATCGCGTCGTTGGGCTACAGAGAATGGAGAGAATTCCGAG CGCGCAACCGCCTCCTCTGTCCAAACACCAGGCGGATCTGTCAGACGTCCAGGGAATGGA TTTCCCGATGTATGTTTATAAACCCAGGCGAGGGTTGAAGCGAGGAGAAGAGAACAAGGA GACCTACAAGCTGCCTCACAGGCTTATCGAGAAGAAAAGGCGTGACCGGATAAACGAGTG CATAGCTCAGCTGAAAGACTTACTGCCGGAGCACCTGAAACTCACGACTCTGGGACATCT GGAGAAGGCCGTGGTCTTAGAGCTGACTCTGAAACACGTGAAAGCCCTCACCTCCCTCCT GGAACAGCAGCAGCAGAAAATTCTGGCCCTG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)