Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2107 cluster # 2107       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2107#0 length = 621 sequences # 4  

consensusID : consensus_2107#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 621
fasta sequence
                              [AGAAGCGGTGAGGATCTTTTGTATTTCAGTCCACTCTGCTATTTTATAGCTTTATAGAAGCAAAGATGTCCTTCTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATGAGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACCCAGACTTCGACCCACGAAGTGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAGTGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGATCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTCTCCGGTCAGACATGGAGGACGTCTCTCTGGCTCTGCTCATGTCACCCGCTACTTTTGACGCTTACCTGATCAGGAAGGCCACAAAGCGTCTGGGCACAGATGAAGATGTCCTGGTGGAAATTTTTGCAACAAGAACAAACAAGGAGATTCTGGAAATCAAGAGCGCCTTCAAGGAAGAATATAACATAGATCTGGAGGATGTCATCAGGGATGAGACCAGCGGGGACTTCGCCACAGCCCTGCTGGCCATGCTCCAAGCTC]

[+] EMBL BU807257             [AGAAGCGGTGAGGATCTTTTGTATTTCAGTCCACTCTGCTATTTTATAGCTTTATAGAAGCAAAGATGTCCTTCTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATGAGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACCCAGACTTCGACCCACGAAGTGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAGTGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGATCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTCTCCGGTCAGACATGGAGGACGTCTCTCTGGCTCTGCTCATGTCACCCGCTACTTTTGACGCTTACCTGATCAGGAAGGCCACAAAGCGTCTGGGCACAGATGAAGATGTCCTGGTGGAAATTTTTGCAACAAGAACAAACAAGGAGATTCTGGAAATCAAGAGCGCCTTCAAGGAAGAATATAACATAGATCTGGAGGATGTCATCAGGGATGAGACCAGCGGGGACTTCACCACAGCCCTGCTGGCCATG          ]
[+] EMBL CA591188             [  AAGCGGTGAGGATCTTTTGTATTTCAGTCCACTCTGCTATTTTATAGCTTTATAGAAGCAAAGATGTCCTTCTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATGAGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACCCAGACTTCGACCCACGAAGTGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAGTGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGATCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTCTCCGGTCAGACATGGAGGACGTCTCTCTGGCTCTGCTCATGTCACCCGCTACTTTTGACGCTTACCTGATCAGGAAGGCCACAAAGCGTCTGGGCACAGATGAAGATGTCCTGGGGGAAATTTTTGCAACAAGAACAAACAAGGAGATTCTGGAAATCAAGAGC                                                                                                 ]
[+] EMBL CA589070             [                                                     ATAGAAGCAAAGATGTCCTTCTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATGAGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACCCAGACTTCGACCCACGAAGTGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAGTGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGATCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTCTCCGGTCAGACTTGGAGGACGTCTCTCTGGCTCTGCTCATGTCACCCGCTACTTTTGACGCTTACCTGATCAGGAAGGCCACAAAGCGTCTGGGCACAGATGAAGATGTCCTGGTGGAAATTTTTGCAACAAGAACAAACAAGGAGATTCTGGAAATCAAGATCGCCTTCAAGGAAGAATATAACATAGATCTGGAGGATGTCATCAGGGATGAGACCAGCGGGGACTTCGCCACAGCCCTGCTGGCCATGCTCCAAGCTC]
[+] EMBL FR0061687            [                                                       AGAAGCAAAGATGTCCTGGTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATGAGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACCCAGACTTCGACCCACGAAGGGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAGTGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGATCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTCTCCGGTCAGACTTGGAGGACGTCTCTCT                                                                                                                                                                                                                                         ]


>consensus_2107#0 AGAAGCGGTGAGGATCTTTTGTATTTCAGTCCACTCTGCTATTTTATAGCTTTATAGAAG CAAAGATGTCCTTCTTTAAGAAGTTCTTCAAAAACGTCATCCATGACAGAGACCCAGATG AGACCGTCACAGTAAAGGGCAAAAAGAAACCAAAGTATTATGGAACAATTGCCCCGTACC CAGACTTCGACCCACGAAGTGACGCCTCAAATCTGCAGAGTTCAATTGAATCAAGAGGAG TGGACGAGGACGTGATCGTCTCAATCCTGGTGAAGAGAAACAATGAGCAGCGGCAGAAGA TCAAAGTAGTTTATGAAGCAACGGCTGGGGAGAGATTGGACAAAGCTCTGAAGTCAGCTC TCCGGTCAGACATGGAGGACGTCTCTCTGGCTCTGCTCATGTCACCCGCTACTTTTGACG CTTACCTGATCAGGAAGGCCACAAAGCGTCTGGGCACAGATGAAGATGTCCTGGTGGAAA TTTTTGCAACAAGAACAAACAAGGAGATTCTGGAAATCAAGAGCGCCTTCAAGGAAGAAT ATAACATAGATCTGGAGGATGTCATCAGGGATGAGACCAGCGGGGACTTCGCCACAGCCC TGCTGGCCATGCTCCAAGCTC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)