Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2167 cluster # 2167       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2167#0 length = 661 sequences # 4  
consensusID : consensus_2167#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 661
fasta sequence 
                              [AGCCTGAGATAAAAACACGTAGCAAGACAAGCAGGGACGAGGATAATACATCTTCTGAAGGCTTACTACAAAAGAATGGAAATGTAATAGCTGTATATTTTTAGATATTGTCAGATAAGGCCATATTACCCAAGTACAAGCCGAGTCCATGATGGTACGAGCAGTCTTGGTGACTGCCACCAGTCTGGCATTGACTGGGGCTGTGGTGGCACATGCTTATCTACTTAAACACCAGTTCTACCCAACTGTGGTCTACCTCACCAAGAGCA-GCCCGAGCATGGCGGTGTTGTATATTCAGGCCTTTGTGTTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAGGGCGGCAGAAATGGAGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCTGGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCTGCTTTTTCTTAAGTGCTTTCACTGGCTGGCTGAGGACCGGGTGGACTTTATGGAGAGAAGTCCAAATATATCATGGCTTTTCCACTTCAGAGTATTGTCTCTCTTGGGGATGTTGGGTGNTCTGGATTTCCTGTTTGTCAACCATGCCTGTCACAGCATCCTCACCAGAGGAGCATCAATC]

[+] EMBL BU806191             [AGCCTGAGATAAAAACACGTAGCAAGACAAGCAGGGACGAGGATAATACATCTTCTGAAGGCTTACTACAAAAGAATGGAAATGTAATAGCTGTATATTTTTAGATATTGTCAGATAAGGCCATATTACCCAAGTACAAGCCGAGTCCATGATGGTACGAGCAGTCTTGGTGACTGCCACCAGTCTGGCATTGACTGGGGCTGTGGTGGCACATGCTTATCTACTTAAACACCAGTTCTACCCAACTGTGGTCTACCTCACCAAGAGCA GCCCGAGCATGGCGGTGTTGTATATTCAGGCCTTTGTGTTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAGGGCGGCAGAAATGGAGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCTGGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCTGCTTTTTCTTAAGTGCTTTCACTGGCTGGCTGAGGACCGGGTGGACTTTATG                                                                                                                                 ]
[+] EMBL CA589067             [                                                 ATCTTCTGAAGGCTTACTACAAAAGAATGGAAATGTAATAGCTGTATATTTTTAGATATTGTCAGATAAGGCCATATTACCCAAGTACAAGCCGAGTCCATGATGGTACGAGCAGTCTTGGTGACTGCCACCAGTCTGGCATTGACTGGGGCTGTGGTGGCACATGCTTATCTACTTAAACACCAGTTCTACCCAACTGTGGCCTACCTCACCAAGAGCA GCCCGAGCATGGCGGTGTTGTATATTCAGGCCTTTGTATTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAGGGCGGCAGAAATGGAGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCTGGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCTGCTTTTTCTTAAGTGCTTTCACTGGCTGGCTGAGGACCGGGTGGACTTTATGGAGAGAAGTCCAAATATATCATGGCTTTTCCACTTCAGAGTATTGTCTCTCTTGGGGATGTTGGGTGTTCTGGATTTCCTGTTTGTCAACCATGCCTGTCACAGCATC                     ]
[+] EMBL BU808293             [                                                 ATCTTCTGAAGGCTTACTACAAAAGAATGGAAATGTAATAGCTGTATATTTTTAGATATTGTCAGATAAGGCCATATTACCCAAGTACAAGCCGAGTCCATGATGGTACGAGCAGTCTTGGTGACTGCCACCAGTCTGGCATTGACTGGGGCTGTGGTGGCACATGCTTATCTACTTAAACACCAGTTCTACCCAACTGTGGTCTACCTCACCAAGAGCATTCTCTAGCATGGCGGTGTTGTATATTCAGGCCTTTGTGTTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAGGGCGGCAGAAATGGAGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCTGGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCTGCTTTTTCTTAAGTGCTT                                                                                                                                                                   ]
[+] EMBL BU806812             [                                                                                                                                                                                                                                       CCAGTTCTACCCAACTGTGGTCTACCTCACCAAGAGCA GCCCGAGCATGGCGGTGTTGTATATTCAGGCCTTTGTATTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAGGGCGGCAGAAATGGTGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCTGGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCTGCTTTTTCTTAAGTGCTTTCACTGGCTGGCTGAGGACCGGGTGGACTTTATGGAGAGAAGTCCAAATATATCATGGCTTTTCCACTTCAGAGTATTGTCTCTCTTGGGGATGTTGGGTGNTCTGGATTTCCTGTTTGTCAACCATGCCTGTCACAGCATCCTCACCAGAGGAGCATCAATC]




>consensus_2167#0
AGCCTGAGATAAAAACACGTAGCAAGACAAGCAGGGACGAGGATAATACATCTTCTGAAG
GCTTACTACAAAAGAATGGAAATGTAATAGCTGTATATTTTTAGATATTGTCAGATAAGG
CCATATTACCCAAGTACAAGCCGAGTCCATGATGGTACGAGCAGTCTTGGTGACTGCCAC
CAGTCTGGCATTGACTGGGGCTGTGGTGGCACATGCTTATCTACTTAAACACCAGTTCTA
CCCAACTGTGGTCTACCTCACCAAGAGCAGCCCGAGCATGGCGGTGTTGTATATTCAGGC
CTTTGTGTTGGTGTTCATCCTGGGAAAGTTCATGAGGAAGGTCTTTTTTGGACAGCTGAG
GGCGGCAGAAATGGAGCATCTCATCGAGCGCTCCTGGTATGCAGTGACGGAGACGTGCCT
GGCATTCACTGTGTTCAGAGATGACTTCTCTCCCCGCTTCGTTGCTCTCTTCACCCTTCT
GCTTTTTCTTAAGTGCTTTCACTGGCTGGCTGAGGACCGGGTGGACTTTATGGAGAGAAG
TCCAAATATATCATGGCTTTTCCACTTCAGAGTATTGTCTCTCTTGGGGATGTTGGGTGN
TCTGGATTTCCTGTTTGTCAACCATGCCTGTCACAGCATCCTCACCAGAGGAGCATCAAT
C

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)