Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2218 cluster # 2218       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2218#0 length = 856 sequences # 4  

consensusID : consensus_2218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 856
fasta sequence
                              [AGGAGTCGGAGCCGGAGCGCTTCAGTTTACCTTTAACGGAGAGCTGTCAGCACCGGCGGATATACGAGCTGCGCACACCCGCTCCTACTCCTCCGCTCCAGCTGAGAATAGACCAAAAAGTCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACATTACGTAGCTGGAGCCAGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAACATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCCTCTGGCGGATCTCCCTCTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGCCACGCCA-GGGACGTGGAGCAGGTGTATCTGCGCTGCTCGCAGGGCTCCCTGGAGTGGCTCTACCCCACCGGGGCCATCATCGTCAATCTCCGACCCAACATCCTCTCCCCGGCCGCCGCCCGTCTCTCCGTCTGCATCAAACCCGCTCCGGACTCCAGAGGCACCAACGTCTACCTGGACCGCAGCGGCAAGCTGCGGCTGCTGCTGCGCGAGCAGGACCAGGCTCGGGGCAAGGTGCAGTGCTTCGGCATCACCGAGGGGGCGCTCTTCATCGAAGCCGTCCCACACATGGACATCAGTCGCAGAACCACAGCGTTCCAGTACGAGCTGCTCAGCAACAGGCCGGGACCAGATGCGCGCTCTCTGGGTGCGCCGTGTCAGCCCTGCAGTGATGCCGAGATCCTTCTGGCTGTCTGCACCAGTGACATCGTGGCGCGAGGCAGCATCACAAAGGTGGAGCAGGAAGAGGAACACTCGTCCATCAGTGTGGGTCTAAGC]

[+] EMBL BU807850             [AGGAGTCGGAGCCGGAGCGCTTCAGTTTACCTTTAACGGAGAGCTGTCAGCACCGGCGGATATACGAGCTGCGCACACCCGCTCCTACTCCTCCGCTCCAGCTGAGAATAGACCAAAAAGTCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACATTACGTAGCTGGAGCCAGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAACATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCCTCTGGCGGATCTCCCTCTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGCCACGCCA GGGACGTGGAGCAGGTGTATCTGCGCTGCTCGCAGGGCTCCCTGGAGTGGCTCTACCCCACCGGGGCCATCATCGTCAATCTCCGACCCAACATCCTCTCCCCGGCCGCCGCCCGTCTCTCCGTCTGCATCAAACCCGCTCCGGACTCCAGAGGCACCAACGTCTACCTGGACCGCAGCGGCAAGCTGCGGCTG                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA846321             [                                           CTGTTAGCACCGGCGGATATACGAGCTGCGCACACCCGCTCCTACTCCTCCGCTCCAGCTGAGAATAGACCAAAAAGTCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACATTACGTAGCTGGAGCCAGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAACATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCCTCTGGCGGATCTCCCTCTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGCCACGCCA GGGACGTGGAGCAGGTGTATCTGCGCTGCTCGCAGGGCTCCCTGGAGTGGCTCTACCCCACCGGGGCCATCATCGTCAATCTCCGACCCAACATCCTCTCCCCGGCCGCCGCCCGTCTCTCCGTCTGCATCAAACCCGCTCCGGACTCCAGAGGCACCAACGTCTACCTGGACCGCAGCGGCAAGCTGCGGCTGCTGCTGCGCGAGCAGGACCAGGCTCGGGGCAAGGTGCAGTGCTTCGGCATCACCGAGGGGGCGCTCTTCATCGAAGCCGTCCCACACATGGACATCAGTCGCAGAACCACAGCGTTCCAGTACGAGCTGCTCAGCAACAGGCCGGGACCAGATGCGCGCTCTCTGGGTGCGCCGTGTCAGCCCTGCAGTGATGCCGAGATCCTTCTGGCTGTCTGCACCAGTGACATCGTGGCGCGAGGCAGCATCACAAAGGTGGAGCAGGAAGAGGAACACTCGTCCATCAGTGTGGGTCTAAGC]
[+] EMBL FR0057040            [                                                                             CCCGCTCCTACTCCTCCGCTCCAGCTGAGAATAGACCAAAAAGTCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACACTACGTAGCTGGAGCCAGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAACATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCGTCTGGCGGATCTCCCTCTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGGCACGCCAGGGGACGTGGGGGAGGTGTATCTGCACTGCTCGCAGGGCTCCCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BU808005             [                                                                              CCGCTCCTACTCCTCCGCTCCATTTGACAATAGACCAAAAAGTCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACATTACGTAGCTGGAGCCAGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAACATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCCTCTGGCGGATCTCCCTCTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGCCACGCCA GGGACGTGGAGCAGGTGTATCTGCGCTGCTCGCAGGGCTCCCTGGAGTGGCTCTACCCCACCGGGGCCATCATCGTCAATCTCCGACCCAACATCCTCTCCCCGGCCGCCGCCCGTCTCTCCGTCTGCATCAAACCCGCTCCGGACTCCAGAGGCACCAACGTCTACCTGGACCGCGGCGGCAAGCTGCGGCTGCTGCTGCGCGAGCAGGACCAGGCTCGGGGCAAGGTGCAGTGCTTCGGCATCACCGAGGGGGCGCTCTTCATCGAAGCCGTCCCACACATGGACATCAGTCGCAGAACCACAGCG                                                                                                                                                                                       ]


>consensus_2218#0 AGGAGTCGGAGCCGGAGCGCTTCAGTTTACCTTTAACGGAGAGCTGTCAGCACCGGCGGA TATACGAGCTGCGCACACCCGCTCCTACTCCTCCGCTCCAGCTGAGAATAGACCAAAAAG TCCCGGACAACGACGCGGAGCGGACCCGGGGGCACATGGAAACATTACGTAGCTGGAGCC AGGGCGGCGGACTTCATCTGAGTTTCACCCCGGAGGAGGCGAAGTGAGCGGCGACGTCAA CATGCTCAGCCCGACGTTGGCCCCCCTGTTGCCGCTGCTGCTCCTCTGGCGGATCTCCCT CTGCCAGTACTCCAGCGACCAGTGTAGCTGGAAGGGCAGCGGTCTGATGCACGAAGGCCA CGCCAGGGACGTGGAGCAGGTGTATCTGCGCTGCTCGCAGGGCTCCCTGGAGTGGCTCTA CCCCACCGGGGCCATCATCGTCAATCTCCGACCCAACATCCTCTCCCCGGCCGCCGCCCG TCTCTCCGTCTGCATCAAACCCGCTCCGGACTCCAGAGGCACCAACGTCTACCTGGACCG CAGCGGCAAGCTGCGGCTGCTGCTGCGCGAGCAGGACCAGGCTCGGGGCAAGGTGCAGTG CTTCGGCATCACCGAGGGGGCGCTCTTCATCGAAGCCGTCCCACACATGGACATCAGTCG CAGAACCACAGCGTTCCAGTACGAGCTGCTCAGCAACAGGCCGGGACCAGATGCGCGCTC TCTGGGTGCGCCGTGTCAGCCCTGCAGTGATGCCGAGATCCTTCTGGCTGTCTGCACCAG TGACATCGTGGCGCGAGGCAGCATCACAAAGGTGGAGCAGGAAGAGGAACACTCGTCCAT CAGTGTGGGTCTAAGC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)