Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2230 cluster # 2230       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2230#0 length = 728 sequences # 5  

consensusID : consensus_2230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 728
fasta sequence
                              [CCGTGGGCAGGAATGCTCCACCTGCTGCCACCATGGACGTGTTTGACCGCAACATCAACATCGATGCTCTCTTCAAGTTCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAAAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGCTGTCAATCCCAGCATCATCATCACGGCCTTCATGGGAACCTCGGTGATCTTCATCTGCTTCACTCTCAGCGCTCTGTACGCTAAACGCAGGAGCTA-CCTGTTCCTGGGAGGTACCCTGATGTCTGCCCTCTCGCTGCTGCTCCTCCTGTCCCTCTTCAACATCTTCTTGGGCTCCGTTGTGCTCTTCAAGGCCAACATGTACGTGGGGCTGCTCATTATGTGCGGCTTCGTCCTCTTCGACACTCAGCTCATCATCGAAAAAGCCGAGAACGGGGACAAGGACTACGTGTGGCACTGTGTGGAACTCTTCCTGGACTTTGTCGCCATCTTCAGGAAGCTGATGGTCATCCTGGCCATGAACGACAAGGATAAG]

[+] EMBL CA588224             [CCGTAGGTAGGTATTCTTCACCTGCTGCCACCATGGACGTGTCTTTCCGCAACATCAACATCGATGCTCTCTTCAAGTTCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAGAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGCTGTCAATCCCAGCATCATCATCACGGCCTTCATGGGAACCTCGGTGATCTTCATCTGCTTCACTCTCAGCGCTCTGTACGCTAAACGCAGGAGCTA CCTGTTCCTGGGAGGTACCCTGATGTCTGCCCTCTCGCTGCTGCTCCTCCTGTCCCTCTTCAACATCTTCTTGGGCTCCGTTGTGCTCTTCAAGGCCAACATGTACGTGGGGCTGCTCATTATGTGCGGCTTCGTCCTCTTCGACACTCAGCTCATCATCGAAAAAGCCGAGAACGGGGACAAGGACTACGTGTGGCACTGTGTGGAACTCTTCCTGGACTTTGTCGCCATCTTCAGGAAGCTGATGGTCATCCTGGCCATGAACGACAAGGATAAG]
[+] EMBL CA588538             [    GTCCATAAATGCTCTCCCTGCTGCCACCATGGACGTGTTTGACC CCTTATAAGGATCGATGCTCTCTTCAAGTTCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAAAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCTTTGCTGTCAATCCCAGCATCATCATCACGGCCTTCATGGGAACCTCGGTGATCTTCATCTGCTTCACTCTCAGCGCTCTGTACGCTAAACGCAGGAGCTA CCTGTTCCTGGGAGGTACCCTGATGTCTGCCCTCTCGCTGCTGCTCCTCCTGTCCCTCTTCAACATCTTCTTGGGCTCCGTTGTGCTCTTCAAGGCCAACATGTACGTGGGGCTGCTCATTATGTGCGGCTTCGTCCTCTTCGACACTCAGCTCATCATCGAAAAGGCCGAGAACGGGGACAAGGACTACGTGTGGCACTGTGTGGAACTCTTCCTGGACTTTGGCGCCATCTTCAGGAAGCTGATGGTCATCCTGGCCATGAACGACAAGGATAAG]
[+] EMBL FR0062250            [                                          TTGACCGCATCATCAACATCGATGCTCTCTTCAAGGGCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAAAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGNGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGTTGGCAAACCCAGCATCATCATCACGGGCTTCATGGGAACCTCGGGGATCTTTATCTGCTTCACTCTC                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA846972             [                                             ACCGCAACATCAACATCGATGCTCTCTTCAAGTTCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAGAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGCTGTCAATCCCAGCATCATCATCACGGCCTTCATGGGAACCTCGGTGATCTTCATCTGCTTCACTCTCAGCGCTCTGTACGCTAAACGCAGGAGCTA CCTGTTCCTGGGAGGTACCCTGATGTCTGCCCTCTCGCTGCTGCTCCTCCTGTCCCTCTTCAACATCTTCTTGGGCTCCGTTGTGCTCTTCAAGGCCAACATGTACGTGGGGCTGCTCATTATGTGCGGCTTCGTCCTCTTCGACACTCAGCTCATCATCGAAAAAGCCGAGAACGGGGACAAGGACTACGTGTGGCACTGTGTGGAACTCTTCCTGGACTTTGTC                                                   ]
[+] EMBL FR0062178            [                                                                    CTCTTCAAGGTCTCCCAGATAGGGCGCTCCACTCAGCTGCACCTGAAAAACGTGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCGTTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGTGGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTGGCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGTTGCCAAACCCAGCATCATCATCACGGGCTTCATGGGAACCTCGGGGATCTTCATCTGCTTCACTCTCAGCGCTCTGGACGCTAAAAGCAGGACCTACCCTGTT                                                                                                                                                                                                                                                                               ]


>consensus_2230#0 CCGTGGGCAGGAATGCTCCACCTGCTGCCACCATGGACGTGTTTGACCGCAACATCAACA TCGATGCTCTCTTCAAGTTCTCCCAGATATCTCGCTCCACTCAGCTGCACCTGAAAAACG TGTACTCCAGCCTGGCGGCGTGCATGCTCGTGGCTGCCGCCGGCTCTTACGTCCATGTCG TTACACGCCTCTTTCAGGGGGGCCTTCTGTCAGCCCTGGGCTCCCTGGCGATGATCGTGT GGCTCGGCATGACGCCTCACAGCCCCGAGTCGGAGCGGAAGAGAATGGCCATCCTGGCTG GCTTCGCCTTCCTCACAGGTCTGGGTCTGGGCCCCACTCTGGACTTTGTCATTGCTGTCA ATCCCAGCATCATCATCACGGCCTTCATGGGAACCTCGGTGATCTTCATCTGCTTCACTC TCAGCGCTCTGTACGCTAAACGCAGGAGCTACCTGTTCCTGGGAGGTACCCTGATGTCTG CCCTCTCGCTGCTGCTCCTCCTGTCCCTCTTCAACATCTTCTTGGGCTCCGTTGTGCTCT TCAAGGCCAACATGTACGTGGGGCTGCTCATTATGTGCGGCTTCGTCCTCTTCGACACTC AGCTCATCATCGAAAAAGCCGAGAACGGGGACAAGGACTACGTGTGGCACTGTGTGGAAC TCTTCCTGGACTTTGTCGCCATCTTCAGGAAGCTGATGGTCATCCTGGCCATGAACGACA AGGATAAG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)