Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2249 cluster # 2249       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2249#0 length = 474 sequences # 5  
consensusID : consensus_2249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 474
fasta sequence 
                              [GTGTTCTCCCCACAATGTGGGCAGGTCAGGAACATGGCAACCT-TGAAGGACAT--CACCATCCGGTTGAAGTC-CATC-AAGAACATC-CAGAAGATCAC-CAAGTCCATGAA-AATGGTT-GCTGCTGCCAAGTAC-GCTCGTGC-TGAGAAGCAGT-TGAAGCC-CGCCAGGATCTATGGCAACGGTGCTCTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGTGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAGACCATCAAGAATGAGATCGCTAACCTGACTGGTTCGGGC-AAAGAGGTCATGGTCATCAATGTGGGCGACAAGCTGAGAGGTCTGCTGCACAGAACTCACGGNAAACACATCATCCTCAACTGTAAAGAAGTCGGCCGCAAGCCGCCCAGTTTTGGCGACGCCTCGATCGTGGGC]

[+] EMBL FR0063035            [GTGTTCTCCCCACAATGTGGGCAGGTCAGGAACATGGCAACCT TGAAGGACAT  CACCATCCGGTTGAAGTC CATC AAGAACATC CAGAAGATCAC CAAGTCCATGAA AATGGTT GCTGCTGCCAAGTAC GCTCGTGC TGAGAAGCAGT TGAAGCC CGCCAGGATCTATGGCAACGGTGCTCTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGTGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAGACCATCAAGAATGAGATCGCTAACCTGACTGGTTCGGGC AAAGAGGTCATGGTCATCAATGTGGGCGACAAGCTGAGAGGTCTGCTGCACAGAACTCACG                                                                          ]
[+] EMBL FR0062482            [    TCTCCCCACAATGTGGGCAGGACAGGAACATGGCAACCTGTGAAGGACATC CACCATCCGGTTGAAGTC CATC AAGAACATC CAGAAGATCAC CAAGTCCATGAA AATGGAT GCTGCTGCCAAGTAC GCTCGTGC TGAGAAGCAGT TGAAGCC CGCCAGTATCTATGGCAACGTGGCTCTGACGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGGGCGACCTCCGACCGTGCCCTGTGTGGCGCCATCCACTCCGGGGTGGCCAAGACCATCAAGAGTGAGATCG                                                                                                                                                            ]
[+] EMBL FR0062877            [           ACAATGTGGGCAGGTCAGGAACATGGCAACCT TGAAGGAGAT  CACCATCCGGTTGAAGTC CATC AAGAACATC CAGAAGATCAC CAAGTCCATGAA AATGGTT GCTGCTGCCAAGTAC GCTCGTGC TGAGAAGCAGT TGAAGCC CGCCAGGATCTATGGCAACGGTGCTCTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGTGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAGACCATCAAGAATGAGATCGCTAACCTGACTGNGTTCGGC AAAGAGGGCATGGTCATCAATG                                                                                                                 ]
[+] EMBL FR0057200            [                   GGCAGGTCAGGAACATGGCAACCT TGAAGGACAT  CACCATCCGGTTGAAGTC CATC AAGAACATC CAGAAGATCAC CAAGTCCATGAA AATGGTT GCTGCTGCCAAGTAC GCTCGTGC TGAGAAGCAGT TGAAGCC CGCCAGGATCTATGGCAACGGTGCTCTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGTGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAGACCATCAAGAATGAGATCGCTAACCTGACTGGTTCGGGC AAAGAGGTCATGGTCATCAATGTGGGCGACAAGCTGAGAGGTCTGCTGCACAGAACTCACGGNAAACACATCATCCTCAACTGTAAAGAAGTCGGCCGCAAGCCGCCCAGTTTTGGCGACGCCTCGATCGTGGGC]
[+] EMBL FR0059330            [                                       cCTT TGAAGGACATGGAGCCATCCGGGTGAAGTCGCATCNAAGAACATCTCAGAAGATCACTCAAGTCCATGAANAATGGTTGGCTGCTGCCAAGTACTGCTCGTGCTTGAGAAGCAGTATGAAGCCTCGCCAGGATCTATGGCAACGGTGCTCTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTGATCATTGGGGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAGACCATCAAGAATGAGATCGCTAACCTGACTGGTTCGGGCAAAAGAGGCCATTGTCATCAATGTGGGCGACAAGCTGAGAGGTCTGCTGCACAGAACTCACGGAAAACACATCATCCT                                                          ]




>consensus_2249#0
GTGTTCTCCCCACAATGTGGGCAGGTCAGGAACATGGCAACCTTGAAGGACATCACCATC
CGGTTGAAGTCCATCAAGAACATCCAGAAGATCACCAAGTCCATGAAAATGGTTGCTGCT
GCCAAGTACGCTCGTGCTGAGAAGCAGTTGAAGCCCGCCAGGATCTATGGCAACGGTGCT
CTGGCGCTGTACGAGAAGGCCGACATTAAGGCTCCCGAGGACAAGTCCGGCAAGCATTTG
ATCATTGGTGTGACCTCCGACCGTGGCCTGTGTGGCGCCATCCACTCCGGTGTGGCCAAG
ACCATCAAGAATGAGATCGCTAACCTGACTGGTTCGGGCAAAGAGGTCATGGTCATCAAT
GTGGGCGACAAGCTGAGAGGTCTGCTGCACAGAACTCACGGNAAACACATCATCCTCAAC
TGTAAAGAAGTCGGCCGCAAGCCGCCCAGTTTTGGCGACGCCTCGATCGTGGGC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)