Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2258 cluster # 2258       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2258#0 length = 856 sequences # 5  

consensusID : consensus_2258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 856
fasta sequence
                              [CTGGAAGGTCACCGAAGCGCCTCTTTCTTTTCCCATGATCAACATTTCACTGAAACCTCTTTATAGCCTTTGATTAGTCACTTTTGCTGACGGGCCATCATAATTACCCCTCGGCCGGGGTAATTATGGGCTGACCGTGCGGTGACGTCACGCTTGGTTACCGCCCCTTTGCGTTCCCTCCTTCCCTTCGCCGCTCGTGGCTGTGATTTCCCACAGACCCTGAAGGCAGCACTGCCCATATCTTTTCGGCGCTTTAGAGCTTCGTGTCGCAGCGACATCGCAAATCTTTCGCACTTGATCCGGATCGGAAGGAAACCAGCGGCTCCATCGCCTACCGATGGAGCAGAAGAGGCGCCGAGCTGTC-GTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAGCGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGTTGGGTTGGACCACATCAGGAACGCTACGATTCAACGTCACATGCAACCAGACCAACAACACCAGCACGACCCTCCACACCACGACCACGGCGAGGGTC-ACCACGACGACCACGGCGGAGGGTCACC-ACGACGACCACGACCTCGGTGACGCGGAGCGTGTGACGCTGAACCTGAGCTCAGGTGCAGCAGAGTGTCTCAACGCCTCCACCATCCTCTCCTCTCATGGGATGTCTCAGGAAGTGGGCGTGTCCTTGGATGACTTCAGCCTGCT]

[+] EMBL BU807464             [CTGGAAGGTCACCGAAGCGCCTCTTTCTTTTCCCATGATCAACATTTCACTGAAACCTCTTTATAGCCTTTGATTAGTCACTTTTGCTGACGGGCCATCATAATTACCCCTCGGCCGGGGTAATTATGGGCTGACCGTGCGGTGACGTCACGCTTGGTTACCGCCCCTTTGCGTTCCCTCCTTCCCTTCGCCGCTCGTGGCTGTGATTTCCCACAGACCCTGAAGGCAGCACTGCCCATATCTTTTCGGCGCTTTAGAGCTTCGTGTCGCAGCGACATCGCAAATCTTTCGCACTTGATCCGGATCGGAAGGAAACCAGCGGCTCCATCGCCTACCGATGGAGCAGAAGAGGCGCCGAGCTGTC GTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAGCGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGT                                                                                                                                                                                                                                                                                 ]
[+] EMBL BU806485             [                                                                                                                                                                                                                          CCTGAAGGCAGCACTGCCCATATCTTTTCGGCGCTTTAGAGCTTCGTGTCGCAGCGACATCGCAAATCTTTCGCACTTGATCCGGATCGGAAGGAAACCAGCGGCTCCATCGCCTACCGATGGAGCAGAAGAGGCGCCGAGCTGTC GTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAGCGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGTTGGGTTGGACCACATCAGGAACGCTACGATTCAACGTCACATGCAACCAGACCAACAACACCAGCACGACCCTCCACACCACGACCACGGCGAGGGTC ACCACGACGACCACGGC GAGGGTCACC ACGACGACCACGACCTCGGTGACGCGGAGCGTGTGACGCTGAACCTGAGCTCAGGTGCAGCAGAGTGTCTCAACGCCTCCACCATCCTCTCCTCTCATGGGATGTCTCAGGAAGTGGGCGTGTCCTTGGATGACTTCAGCCTGCT]
[+] EMBL FR0058578            [                                                                                                                                                                                                                                                                                             CTTTCGCACTTGATCCGGATCGGAAGGAAGGGAGCGGCTCCATCGCCTACCGATGGAGCATAAGAGGCGCCGAGCTGTC GTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAGCGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGTTGGGTTGGACCACATCAGGAACGCTACGATTCAACGGCACATGCAACCAGACCAACAACACCAGCACGACCCTCCACACCACGACCACGGCGAGGGTC ACCACGACGACCACGG GGAGGGT                                                                                                                                                      ]
[+] EMBL CA590757             [                                                                                                                                                                                                                                                                                                        atcCTGGATGTGACGGTAACCA CGGTAACCTGGAAGACCGATGGAGCAGAAGAGGCGCCGAGCTGTC GTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAGCGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGTTGGGTTGGACCACATCAGGAACGCTACGATTCAACGTCACATGCAACCAGACCAACAACACCAGCACGACCCTCCACACCACGACCACGGCGAGGGTC ACCACGACGACCACGGC GAGGGTCACC ACGACGACCACGACCTCGGTGACGCGGAGCGTGTGACGCTGAACCTGAGCTCAGGTGCAGCAGAGTGTCTCAACGCCTCCACCATCCTCTCCTC                                                   ]
[+] EMBL FR0059950            [                                                                                                                                                                                                                                                                                                                                GGCTCCATCGCCTACCGATGGAGCAGAAGGGGCGCCGAGCTGGCGGGTGCCGCGCTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAGCTCCAACTGCAGCGCGGGCACCAGCCCGCCGGACCGGGTCTCGTCCGTGGCCGACCCCAGCGCCGCCCAGCAGAGCCAGAAACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAATGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGGTGGGTTGGACCACATCAGGAACGCTACGATTCAACGTCACATGCAACCAGACCAACAACACCAGCACGACTCTTCACACCACGACCACGGGGAGGGGCAACCACGACGACCACGGCGGAGGGTCACCAACGACGACCc                                                                                                                                       ]


>consensus_2258#0 CTGGAAGGTCACCGAAGCGCCTCTTTCTTTTCCCATGATCAACATTTCACTGAAACCTCT TTATAGCCTTTGATTAGTCACTTTTGCTGACGGGCCATCATAATTACCCCTCGGCCGGGG TAATTATGGGCTGACCGTGCGGTGACGTCACGCTTGGTTACCGCCCCTTTGCGTTCCCTC CTTCCCTTCGCCGCTCGTGGCTGTGATTTCCCACAGACCCTGAAGGCAGCACTGCCCATA TCTTTTCGGCGCTTTAGAGCTTCGTGTCGCAGCGACATCGCAAATCTTTCGCACTTGATC CGGATCGGAAGGAAACCAGCGGCTCCATCGCCTACCGATGGAGCAGAAGAGGCGCCGAGC TGTCGTTGCCGCGGTGATTTTCCTCGCTGTGAGTTTAGCTCAACACGCCACATCAGCGAG CTCCAACTGCAGCGCGGCCACCAGCCCGCCGGACCGGCTCTCGTCCGTGGTCGACCCCAG CGCCGCCCAGCAGAGCCAGAGACGCCACCTGGAGGCGCTGTTCAACAGGTACGGAGAGAA TGGAACCATCTCCCTGGACGGCCTGAGGCGTCTCCTGCGAACCGTTGGGTTGGACCACAT CAGGAACGCTACGATTCAACGTCACATGCAACCAGACCAACAACACCAGCACGACCCTCC ACACCACGACCACGGCGAGGGTCACCACGACGACCACGGCGGAGGGTCACCACGACGACC ACGACCTCGGTGACGCGGAGCGTGTGACGCTGAACCTGAGCTCAGGTGCAGCAGAGTGTC TCAACGCCTCCACCATCCTCTCCTCTCATGGGATGTCTCAGGAAGTGGGCGTGTCCTTGG ATGACTTCAGCCTGCT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)