Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2270 cluster # 2270       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2270#0 length = 643 sequences # 5  

consensusID : consensus_2270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 643
fasta sequence
                              [CCGCCCCACACCGCTGTATCCAGTTCTACTAGTTTTACGGTATGGATGACACGCAGAAATGGCCAGAAATAGAAAAAGCATCGG-CGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTGAGCTGTAACAGTTTGGAGGTCCTGCCGGATGGACTGAACCAGTGCACCAAGCTCTCCACCATCAACATCTCCAAGAACCGCATCATGGGCTTTCCATCCGGTTTCTTCTCGGAGGATCTGGATCTTCTGAGCTCAGTGATGGCTTCTGACAACTCCATTGACCGGTTGACTGCAGATATTCAAAAGCTGGCTGCTCTGAAGGTGCTTGACCTCTCCAATAACAAGCTGAGCGA]

[+] EMBL BU807439             [CCGCCCCACACCGCTGTATCCAGTTCTACTAGTTTTACGGTATGGATGACACGCAGAAATGGCCAGAAATAGAAAAAGCATCGG CGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTGAGCTGTAACAGTTTGGAGGTCCTGCCGGATGGACTGAACCAGTGCACCAAGCTCTCCACCATCAACATCTCCAAGAACCGCATCATGGGCTTTCCATCCGGTTTCTTCTCGGAGGATCTGGATCTTCTGAGCTCAGTGATGGCTTCTGACAACTCCATTGACCGGTTGACTGCAGATATTCAAAAGCTGGCTGCTCTGAAGGTGCTTGACCTCTCCAATAACAAG        ]
[+] EMBL BU804544             [CCGCCCCACACCGCTGTATCCAGTTCTACTAGTTTTACGGTATGGATGACACGCAGAAATGGCCAGAAATAGAAAAAGCATCGG CGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATACCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTGAGCTGTAACAGTTTGGAGGTCCTGCCGGATGGACTGAACCAGTGCACCAAGCTCTCCACCATCAACATCTCCAAGAACCGCATCATGGGCTTTCCATCCGGTTTCTTCTCGGAGGATCTGGATCTTCTGAGCTCAGTGATGGCTTCTGACAACTCCATTGACCGGTTGACTGCAGATATTCAAAAGCTGGCTGCTCTGAAGGTGC                            ]
[+] EMBL BU805333             [                              AGTTTTACGGTATGGATGACACGCAGAAATGGCCAGAAATAGAAAAAGCATCGGACGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTGAGCTGTAACAGTTTGGAGGTCCTGCCGGATGGACTGAACCAGTGCACCAAGCTCTCCACCATCAACATCTCCAAGAACCGCATCATGGGCTTTCCATCCGGTTTCTTCTCGGAGGATCTGGATCTTCTGAGCTCAGTGATGGCTTCTGACAACTCCATTGACCGGTTGACTGCAGATATTCAAAAGCTGGCTGCTCTGAAGGTGCTTGACCTCTCCAATAACAAGCTGAGCGA]
[+] EMBL FR0061522            [                                                   CGCAGAAATGGCCAGAAATAGAAAAAGCATCGG CGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTCACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTG                                                                                                                                                                                                                                         ]
[+] EMBL FR0062100            [                                                   CGCAGAAATGGCCAGAAGGAGAAAAAGCATCGG CGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGGTAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACACTATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCCAGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGGATGTCATCGATAAATTAACGTCTCTGAGAGTCCTGGACCTTTCAGTCAACAACCTCACGAGTTTGCCAGAGGGAATAACTtc                                                                                                                                                                                                                                                                     ]


>consensus_2270#0 CCGCCCCACACCGCTGTATCCAGTTCTACTAGTTTTACGGTATGGATGACACGCAGAAAT GGCCAGAAATAGAAAAAGCATCGGCGGGAAAGAGACGTGAACTGGTTTTACAGGGTTCGG TAGTGGATGGGAGAATATCGTCAAATGGGGGACTTGCCTCTGCGATTTATTCACTGACAC TATTGAATTACCTAGAGATAAGCCAGTGTCCAAGTTTGACAGAGATCCACGAGGATATCC AGCAGCTAACGAACCTCCAAAGCCTCATCTTGTGCAGAAACAAGTTAGCCTCGATCCCGG ATGTCATCGATAAATTAACGTCTCTGAAAGTCCTGGACCTTTCAGTCAACAACCTCACGA GTTTGCCAGAGGGAATAACTCGGCTACGAGAGCTGAACACCCTGAATGTGAGCTGTAACA GTTTGGAGGTCCTGCCGGATGGACTGAACCAGTGCACCAAGCTCTCCACCATCAACATCT CCAAGAACCGCATCATGGGCTTTCCATCCGGTTTCTTCTCGGAGGATCTGGATCTTCTGA GCTCAGTGATGGCTTCTGACAACTCCATTGACCGGTTGACTGCAGATATTCAAAAGCTGG CTGCTCTGAAGGTGCTTGACCTCTCCAATAACAAGCTGAGCGA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)