Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2288 cluster # 2288       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2288#0 length = 831 sequences # 5  
consensusID : consensus_2288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 831
fasta sequence 
                              [AAAGCAGAATTTCTGTATTATCTTTACAAAAGCATCAACACCAGCAGTTTTCAACATTACATTTCCAAAGTGTGCTGATTTTATTCCTTTAAACCCACAATTGAAACCGATGCGTTACTCTTCTGTGCGTCCAGCTGCAGGAAGCAGCGAGGAGCCACGTTGCTGCTCTAACGAACCTGTTTTTCACTTCTGGATTTACAGGAAACGTTGCTGATTTTCCCTCCATTACAATTCAAACAAAACAGGGAAAAATGACGGCCTCCACTTTTCCAGTGACTCTGATCATCTTCAGCCGGACGGGAAAGAACAGAAGAGCTCAGATCAGAAGTTCACTCCAGACAGTCACCGTTCAGCTTTTTAATTCTTTAAAAGAAAAACTTCCACAGAAACCAATCATGCCGTTTTATTTATGTGAGTGTGTGTGTGAGAGGAACAAAAGGATGAAAGCAGCTGCTCAACATTGACAAACACATTCGGGACTTAAAGTATTAGTTCGTTAATCAATAACTTATCAATATTTAAACGTGTTAAGTCATTTAAGTAAATGTTGGTGAAAATCATGAAAATTGCCTTATCTGTTGATTTTTCTTCAGTTTGTATGAACTTTAGGTATATGTAGCAAGTTTATGGAGATTTCCCGGAATAAATAATAAATGCTAATTGAGTTTGTAATGGAATCATCAACCACGCAAACAGCAACAAGTCTTTGATGTTTACTCAGGTTTTCTAATTTCTCACCCTTCGTGAACAAAAACAACAGAAATTGATAAATGCTTCTAATGGTTTTACTGCAGTTTACTTGCAGTCCAGCAGAGGGCGCACTGTGTTCTA]

[+] EMBL CA329664             [AAAGCAGAATTTCTGTATTATCTTTACAAAAGCATCAACACCAGCAGTTTTCAACATTACATTTCCAAAGTGTGCTGATTTTATTCCTTTAAACCCACATTTGAAACCGATGCGTTACTCTTCTGTGCGTCCAGCTGCAGGAAGCAGCGAGGAGCCACGTTGCTGCTCTAACGAACCTGTTTTTCACTTCTGGATTTACAGGAAACGTTGCTGATTTTCCCTCCATTACAATTCAAACAAAACAGGGAAAAATGACGGCCTCCACTTTTCCAGTGACTCTGATCATCTTCAGCCGGACGGGAAAGAACAGAAGAGCTCAGATCAGAAGTTCACTCCAGACAGTCACCGTTCAGCTTTTTAATTCTTTAAAAGAAAAACTTCCACAGAAACCAATCATGCCGTTTTATTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA329460             [    CAGAATTTCTGTATTATCTTTACAAAAGCATCAACACCAGCAGTTTTCAACATTACATTTCCAAAGTGTGCTGATTTTATTCCTTTAAACCCACAATTGAAACCGATGCGTTACTCTTCTGTGCGTCCAGCTGCAGGAAGCAGCGAGGAGCCACGTTGCTGCTCTAACGAACCTGTTTTTCACTTCTGGATTTACAGGAAACGTTGCTGATTTTCCCTCCATTACAATTCAAACAAAACAGGGAAAAATGACGGCCTCCACTTTTCCAGTGACTCTGATCATCTTCAGCCGGACGGGAAAGAACAGAAGAGCTCAGATCAGAAGTTCACTCCAGACAGTCACCGTTCAGCTTTTTAATTCTTTAAAAGAAAAACTTCCACAGAAACCAATCATGCCGTTTTATTTATGTGAGTGTGTGTGTGAGAGGAACAAAAGGATGAAAGCAGCTGCTCAACATTGACAAACACATTCGGGACTTAAAGTATTAGTTCGTTAATCAATAACTTATCAATATTTAAACGTGTTAAGTCATTTAAGTAAATGTTGGTGAAAATCATGAAAATTGCCTTATCT                                                                                                                                                                                                                                                              ]
[-] EMBL CA846660             [                                                                                                                                        GCAGGAAGCAGCGAGGAGCCACGTTGCTGCTCTAACGAACCTGTTTTTCACTTCTGGATTTACAGGAAACGTTGCTGATTTTCCCTCCATTACAATTCAAACAAAACAGGGAAAAATGACGGCCTCCACTTTTCCAGTGACTCTGATCATCTTCAGCCGGACGGGAAAGAACAGAAGAGCTCAGATCAGAAGTTCACTCCAGACAGTCACCGTTCAGCTTTTTAATTATATAAAAGAAAAACTTCCACAGAAACCAATCATGCCGTTTTATTTATGTGAGTGTGTGTGTGAGAGGAACAAAAGGATGAAAGCAGCTGCTCAACATTGACAAACACATTCGGGACTTAAAGTATTAGTTCGTTAATCAATAACTTATCAATATTTAAACGTGTTAAGTCATTTAAGTAAATGTTGGTGAAAATCATGAAAATTGCCTTATCT                                                                                                                                                                                                                                                              ]
[-] EMBL CA845323             [                                                                                                                                                                                                                                                                                                                                                                                                    ACCAATCATGCCGTTTTATTTATGTGAGTGTGTGTGTGAGAGGAACAAAAGGATGA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA331729             [                                                                                                                                                                                                                                                                                                                                                                                                       AATCATGCCGTTTTATTTATGTGAGTGTGTGTGTGAGAGGAACAAAAGGATGAAAGCAGCTGCTCAACATTGACAAACACATTCGGGACTTAAAGTATTAGTTCGTTAATCAATAACTTATCAATATTTAAACGTGTTAAGTCATTTAAGTAAATGTTGGTGAAAATCATGAAAATTGCCTTATCTGTTGATTTTTCTTCAGTTTGTATGAACTTTAGGTATATGTAGCAAGTTTATGGAGATTTCCCGGAATAAATAATAAATGCTAATTGAGTTTGTAATGGAATCATCAACCACGCAAACAGCAACAAGTCTTTGATGTTTACTCAGGTTTTCTAATTTCTCACCCTTCGTGAACAAAAACAACAGAAATTGATAAATGCTTCTAATGGTTTTACTGCAGTTTACTTGCAGTCCAGCAGAGGGCGCACTGTGTTCTA]




>consensus_2288#0
AAAGCAGAATTTCTGTATTATCTTTACAAAAGCATCAACACCAGCAGTTTTCAACATTAC
ATTTCCAAAGTGTGCTGATTTTATTCCTTTAAACCCACAATTGAAACCGATGCGTTACTC
TTCTGTGCGTCCAGCTGCAGGAAGCAGCGAGGAGCCACGTTGCTGCTCTAACGAACCTGT
TTTTCACTTCTGGATTTACAGGAAACGTTGCTGATTTTCCCTCCATTACAATTCAAACAA
AACAGGGAAAAATGACGGCCTCCACTTTTCCAGTGACTCTGATCATCTTCAGCCGGACGG
GAAAGAACAGAAGAGCTCAGATCAGAAGTTCACTCCAGACAGTCACCGTTCAGCTTTTTA
ATTCTTTAAAAGAAAAACTTCCACAGAAACCAATCATGCCGTTTTATTTATGTGAGTGTG
TGTGTGAGAGGAACAAAAGGATGAAAGCAGCTGCTCAACATTGACAAACACATTCGGGAC
TTAAAGTATTAGTTCGTTAATCAATAACTTATCAATATTTAAACGTGTTAAGTCATTTAA
GTAAATGTTGGTGAAAATCATGAAAATTGCCTTATCTGTTGATTTTTCTTCAGTTTGTAT
GAACTTTAGGTATATGTAGCAAGTTTATGGAGATTTCCCGGAATAAATAATAAATGCTAA
TTGAGTTTGTAATGGAATCATCAACCACGCAAACAGCAACAAGTCTTTGATGTTTACTCA
GGTTTTCTAATTTCTCACCCTTCGTGAACAAAAACAACAGAAATTGATAAATGCTTCTAA
TGGTTTTACTGCAGTTTACTTGCAGTCCAGCAGAGGGCGCACTGTGTTCTA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)