Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2328 cluster # 2328       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2328#0 length = 615 sequences # 5  
consensusID : consensus_2328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 615
fasta sequence 
                              [AGCTGTCGGGCTGTCTAGCGGAGAGGCTGGGACAGACGTTTCAGCTTCCCCTGGCTTGGCCGCTGAAAGGCTCCGGCCCACAAACATCCCACGAGTATCTGTCAGAATAGCCGTACTTTTGGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGTCAAACTCTCGTCGGTTATTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGTCTCTTATCTCGGATATTTGGTCTTATTAGGGACACAATGGGTGCATTTCTGGACAAACCAAAGATGGAAAAGTACAATTCCTGTGGGGAAGGTAATAACCTGAGGTATGGGCTCAGTAGCATGCAAGGCTGGCGGGTGGAGATGGAAGACGCACACACGGCCGTGATCGGNCTGCCTCACGCCCTCGACCACTGGTCTTTCTTTGCTGTTTATGACGGCCATGCTGGCTCTCAGGTGGCCAAATATTGCTGCGAGCACTTGCTGGAGCACATCACC]

[+] EMBL BU806594             [AGCTGTCGGGCTGTCTAGCGGAGAGGCTGGGACAGACGTTTCAGCTTCCCCTGGCTTGGCCGCTGAAAGGCTCCGGCCCACAAACATCCCACGAGTATCTGTCAGAATAGCCGTACTTTTGGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGTCAAACTCTCGTCGGTTATTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGTCTCTTATCTCGGATATTTGGTCTTATTAGGGACACAATGGGTGCATTTCTGGACAAACCAAAGATGGAAAAATACAATTCCTGTGGTGAAGGTAATAACCTGAGGTATGGGCTCAGTAGCATGCAAGGCTGGCGGGTGGAGATGGAAGACGCACACACGGCCGTGATCGGCCTGCCTCACGCCCTCGACCACTGGTCTTTCTTTGCTGTTTATGACGGCCATGCTGGCTCTCAGGTGGCCAAATATTGCTGCGAGCACTTGCTGGAGCACATCACC]
[+] EMBL CA589867             [                     AGAGGCTGGGACAGACGTTTCAGCTTCCCCTGGCTTGGCCGCTGAAAGGCTCCGGCCCACAAACATCCCACGAGTATCTGTCAGAATAGCCGTACTTTTGGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGTCAAACTCTCGTCGGTTATTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGTCTCTTATCTCGGATATTTGGTCTTATTAGGGACACAATGGGTGCATTTCTGGACAAACCAAAGATGGAAAAATACAATTCCTGTGGTGAAGGTAATAACCTGAGGTATGGGCTCAGTAGCATGCAAGGCTGGCGGGTGGAGATGGAAGACGCACACACGGCCGTGATCGGNCTGCCTCACGCCCTCGACCACTGGTCTTTCTTTGCTGTTTATGACGGCCATGCTGGCTCTCAGGTGGCCAAATATTGCTGC                        ]
[+] EMBL FR0059378            [                                   ACGTTTCAGCTTCCCCTGGCTTGTCCGCTGAAAGGCTCCGGCCCACAAACATGGGACGAGTATCTGTCAGAATAGCCGTACTTTTGGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGGAGTTTTCGTCGTCAAACTCTCGTCTGGTATTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGGCTTTTATCTCGGATATTTGGTCTTATTAGGGACACAATGGGTGCATTTCTGGGCCAAACc                                                                                                                                                                                                                        ]
[+] EMBL FR0063545            [                                                               TGAGAGGCTCCGGCCCACAAACATCCCACGAGTATCTGTCAGAATAGGCGGACTTTTGGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGTCAAACTCTCGTCGGTTATTCAGTCCGTACCACTGTCGTAGTCGAAGGTGCTGTCCGCTCTTATCTCGGATATTTGGCCTTATTAGGGACACAATGGGTGCATTTCTGGACAAACCAAAGATGGAAAAGTACAATTCCTGTGGGGAAGGTAATAACCTGAGGAA                                                                                                                                                                         ]
[+] EMBL FR0061680            [                                                                                      tgggggGAGTATCTGTCAGAATANCCGTACTTTTGCTAGCCAGCTAAAATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACTTCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTAGCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGGCAAACTCTCGTCGGTTATTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGTCTCTTATCTCGGATATTTGGTCTTATTAGGGACACAATGGGGGCATTTCTGGACAAACCAAAGATGGAAAAGTACAATTCCTGTGGGGAAGGTAATAACCTGAGGTATG                                                                                                                                                                       ]




>consensus_2328#0
AGCTGTCGGGCTGTCTAGCGGAGAGGCTGGGACAGACGTTTCAGCTTCCCCTGGCTTGGC
CGCTGAAAGGCTCCGGCCCACAAACATCCCACGAGTATCTGTCAGAATAGCCGTACTTTT
GGTAGCCAGCTAAGATAATGTAACGAATCACGGGTGTACGCAACAGGGGACGTCCGCACT
TCTACAATTTATATGAACTGAGTCTTGAGTGACGATTGCTCATTGCTAGCTAACTGGCTA
GCTAGCCTAGCTAAAACGCTACCGACCCCGTAGTTTTCGTCGTCAAACTCTCGTCGGTTA
TTCAGTCCGTACCACTGTCGTAGTCGAAGTTGCTGTCGTCTCTTATCTCGGATATTTGGT
CTTATTAGGGACACAATGGGTGCATTTCTGGACAAACCAAAGATGGAAAAGTACAATTCC
TGTGGGGAAGGTAATAACCTGAGGTATGGGCTCAGTAGCATGCAAGGCTGGCGGGTGGAG
ATGGAAGACGCACACACGGCCGTGATCGGNCTGCCTCACGCCCTCGACCACTGGTCTTTC
TTTGCTGTTTATGACGGCCATGCTGGCTCTCAGGTGGCCAAATATTGCTGCGAGCACTTG
CTGGAGCACATCACC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)