Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2346 cluster # 2346       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2346#0 length = 402 sequences # 5  

consensusID : consensus_2346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 402
fasta sequence
                              [GGGAGAAAGGTTTCTGCCTGAAGCCGAG-GTCCAGATCCAGCCGC-CACCATGTCCAGC-AAGCGCGCCAAGGGCAAGACCACCAAGAAGCGCCCCCAGAGGGCCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAACAGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTGGCCTCGCTGGGTAAGAACCCTTCTGATGAGTACCTGGAGGGAATGATGGCAGAGGCGCCCGGGCCCATCAACTTCACCATGTTCCTCACCATGTTCGGAGAGAGGCTCAACGGCACCGACCCCGAGGACGTCATCCGCATCGCCTTCGCCTGTTTTGACGAGGAGGGCTCCGGGGTGATC]

[+] EMBL FR0062543            [GGGACAAATATTTCTGTCTGAAGCCGAG GACCAGATCCAGCCGCGCACCATGTCCAGC AAGCGCTCCAA GTCAACACCACCAAGAAGCGCCCCCAGA GGCCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAACAGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTTGCCTCGGTGGGGAAGAACCCTTTTGAGGAGGACCT GAGGGAATGATGGCAG                                                                                                                                ]
[+] EMBL FR0055450            [  GAGACAGGTTTCTGCCTGGAGCCGAG GTCCAGATCCAGCCGC CACCATGTCCAGC ATGCGCGCCAAGGGCACGACCACCAGGTCGCGCCCCCAGAGGGTCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCACCGTGGCGTTCATCATGATCGACCAGCACAGGGACGGCTTCATCGACATGGAGGATCTGCACGACATGCTGGCCTCGCTGGATAAGTACCCTTCTGATGAGTACCTGGAGGGAATGCTGGCATCGGTGCCCGGGCCCATCACCTTCACCATGTTCCTCACCATGTTCGGAGAGAGGCTCAACGGCACCGACCCCGAGGACGTCATCCGCATCGCCTTCGCCTGTTTTGACGAGGAGGGCTCCGGGGTGATC]
[+] EMBL FR0062382            [            TCTGCCTGAAGCCGAGTGTCCAGATCCAGCCGC CACCATGTCCAGCGAAGCGCACCAAGGGCAAGACCACCAACAAGCGCCCCCAGAGGGCCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAACAGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTGGCCTCGCTGGGTAAGAACCCTTCTGATGAGTACCTGGAGGGAATGATGGCAGAGGCGCCCGGGCCCATCAACTTCACCATGTTCCTCACCATGTTCGGAGAGAGGCTCAACGGCACCGACCCCGAGGACGTCAT                                              ]
[+] EMBL FR0062966            [                                      CAGCCGC CACCATGTCGGGC AAGCGCGCCAAGGGCAAGACCACCAAGAAGCGCCCCCAGAGGGCCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAACAGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTGGCCTCGCTGGAGAAGAACCCTTCTGATGAGTACCTGGAGGGAGAGATGGCAGAGGCGCCCGGGCCCATCAACTTCACCATGTTCCTCACCATGTTCGGAGAGAGGCTCAACGGC                                                                  ]
[+] EMBL FR0062772            [                                       AGCCGC CACCATGTCCAGC AAGCGCGCCAAGGGCAAGACCACCAAGAAGCGCCCCCAGA GGCCACCTCCAATGTCTTCGCCATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAACAGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTGGCCTCGCTGGGTAAGAACCCTTCTGATGAGTACCTGGGAGGAATGATGGCAGAGGCGCCCGGGCCCATCAACTTCACC                                                                                                      ]


>consensus_2346#0 GGGAGAAAGGTTTCTGCCTGAAGCCGAGGTCCAGATCCAGCCGCCACCATGTCCAGCAAG CGCGCCAAGGGCAAGACCACCAAGAAGCGCCCCCAGAGGGCCACCTCCAATGTCTTCGCC ATGTTCGACCAGTCTCAGATCCAGGAGTTCAAAGAGGCGTTCAACATGATCGACCAGAAC AGGGACGGCTTCATCGACAAGGAGGATCTGCACGACATGCTGGCCTCGCTGGGTAAGAAC CCTTCTGATGAGTACCTGGAGGGAATGATGGCAGAGGCGCCCGGGCCCATCAACTTCACC ATGTTCCTCACCATGTTCGGAGAGAGGCTCAACGGCACCGACCCCGAGGACGTCATCCGC ATCGCCTTCGCCTGTTTTGACGAGGAGGGCTCCGGGGTGATC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)