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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 663 fasta sequence
[TGTCATCGGCTGAAGATGGCTGAAGGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCGACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTCAGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGAGCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATATTTCTACAAAGTCTTCCAGTTAGATCAGGAGGAGGCCAGGAGAGTGGCACTGAAGCAGAGAGCAGAACAGATTGCAAACACTGAG]
[+] EMBL BU805775 [TGTCATCGGCTGAAGATGGCTGAAGGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGGAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCGACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTCAGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGAGCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATATTTCTACAAAGTCTTCCAGTTAGATCAGGAG ]
[+] EMBL BU805921 [TGTCATCGGCTGAAGATGGCTGAAGGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTTTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCGACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTCAGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGAGCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATATTTCTACAAAGTCTTCCAGTTAGATCA ]
[+] EMBL BU807411 [ GGCTGAAGGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCGACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTCAGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGAGCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATATTTCTACAAAGTCTTCCAG ]
[+] EMBL CA846917 [ GATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACGGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCGACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTCAGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGAGCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATATTTCTACAAAGTCTTCCAGTTAGATCAGGAGGAGGCCAGGAGAGTGGCACTGAAGCAGAGAGCAGAACAGATTGCAAACACTGAG]
consensusID : consensus_2358#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence
[TCCGACTTTAGCCGTGTTGATTTCGTAAAATGTAACGTGGCAAAATGCTGCGATTGTTCTATATATGTATCTGACAGCTTCATCTAAAGCAACTGTTTTAATTACAGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACTTAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTCCA]
[+] EMBL BU807592 [TCCGACTTTAGCCGTGTTGATTTCGTAAAATGTAACGTGGCAAAATGCTGCGATTGTTCTATATATGTATCTGACAGCTTCATCTAAAGCAACTGTTTTAATTACAGAGAAGCGTGGTGGGGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAATTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACTTAACGTGTTCTCTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACCACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCGCCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGGACTACAGAAGTCTACGACAGTCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2358#0 ------------------------------------------------------------
consensus_2358#1 TCCGACTTTAGCCGTGTTGATTTCGTAAAATGTAACGTGGCAAAATGCTGCGATTGTTCT 60
consensus_2358#0 -----------------TGTCATCGGCTGAAGATGGCTGAA----GGAGAAGCGTGGTGG 39
consensus_2358#1 ATATATGTATCTGACAGCTTCATCTAAAGCAACTGTTTTAATTACAGAGAAGCGTGGTGG 120
***** * * ** * ** **************
consensus_2358#0 GGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAA 99
consensus_2358#1 GGAGGCTGGTTTCAGCAGAGCTTCCAGGCCGTCAAAGATAAGTCATCTGAGGCCTTGGAA 180
************************************************************
consensus_2358#0 TTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACACAACGTGTTCT 159
consensus_2358#1 TTCCTAAAGCGGGACCTGACAGAGTTTTCCACTGTGGTGCAACATGACTTAACGTGTTCT 240
************************************************ **********
consensus_2358#0 CTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACC 219
consensus_2358#1 CTTGTGGCCACAGCAAATGCTGTCCGGAGCAAGCTTGCGACGGAAGGCTCATCAGAGACC 300
************************************************************
consensus_2358#0 ACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCG 279
consensus_2358#1 ACAGAAAAGCTAAAGAAGGGCATCTCTGGATTCTTGGGGGTGATCTCAGAAACACTTGCG 360
************************************************************
consensus_2358#0 CCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGG 339
consensus_2358#1 CCACCCCCAGATAAAACCATTGACTGTGATGTGATCACACTCATGGCAACACCAACAGGG 420
************************************************************
consensus_2358#0 ACTACAGAAGTCTACGACAGTTCAAAGGCCCGTCTTTACAGTCTGCAAGCAGACCCGGCG 399
consensus_2358#1 ACTACAGAAGTCTACGACAGTCCA------------------------------------ 444
********************* **
consensus_2358#0 ACATACTGCAACGAGCCTGATGGACCTCCAGAGCAGTTTGAAAACTGGCTGTCCACTTTC 459
consensus_2358#1 ------------------------------------------------------------
consensus_2358#0 AGAATGGAAGAAATGAAAGGGGAAATCTCAGAACTCCTGGTCAACAGTCCCTCCATACGA 519
consensus_2358#1 ------------------------------------------------------------
consensus_2358#0 GCCTTGTACACCAAAATGGTTCCGGCAGCTGTTGCGCATTCAGAATTCTGGCAGAGATAT 579
consensus_2358#1 ------------------------------------------------------------
consensus_2358#0 TTCTACAAAGTCTTCCAGTTAGATCAGGAGGAGGCCAGGAGAGTGGCACTGAAGCAGAGA 639
consensus_2358#1 ------------------------------------------------------------
consensus_2358#0 GCAGAACAGATTGCAAACACTGAG 663
consensus_2358#1 ------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |