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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2388#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 828 fasta sequence
[ACGTCCCCTGCTGGTTCCGAACCGCGCGAGCGAGCACTTAAGGAGCGCTTAGAAGACCAGGCATCGTCGTCATCGTCGTCCTCTCGCAACCATGACTGACAGGAAAGCCGTGATTAAGAACGCGGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGGAGAAGTACAACATCGAGAAGGACATCGCAGCCTTCATCAAGAAGGAGTTTGACAAGAAGTACAATCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTGACCCACGAGACGAAGCATTTCATTTACTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCAGGCTGAAAATTGTTCTTAGGAGCATTGAGGGTTTTTTTTTCCTCCCTAAACTTAAATCAGAAATGCACTGGTGGCTGATGTGTCCCATACACTAATAACATACCATAACGATGCAAACCCGTGCACATTTGCATGGACTCTACACTATTTAATATGTATGTTACAGTAAGTTTACTTTTCAGTAGTTGCCATGTTAATGCAACTAAACCTTTCTTTCCCCCCCCTTGTTTTGCCTTTAAATTCAGTTGTACGAGACATTAACATGGCCCTTGATTGTATAAATAAAGGAAAGCTGTAGAATGTAGTCGTGCATCGGCTTTCCTTCACACCAAACTCCGAGTGTTGGATTAGATGGTTTAAAAAAAATAAATAGTGTGAGCACCAGTTTAACAACCCCTCATAAAAATTGTGCATTTTTCGCGCCACTTTCAAGGGGAACGTTACCTGCAGGTGCCAACCCAAAACCTTCATGC]
[+] EMBL CA844733 [ACGTCCCCTGCTGGTTCCGAACCGCGCGAGCGAGCACTTAAGGAGCGCTTAGAAGACCAGGCATCGTCGTCATCGTCGTCCTCTCGCAACCATGACTGACAGGAAAGCCGTGATTAAGAACGCGGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGGAGAAGTACAACATCGAGAAGGACATCGCAGCCTTCATCAAGAAGGAGTTTGACAAGAAGTACAATCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTGACCCACGAGACGAAGCATTTCATTTACTTCTACCTGGGCCAGGTGGTCATCCTGCTCTTCAAATCAGGCTGAAAATTGTTCTTAGGAGCATTGAGGGTTTTTTTTTCCTCCCTAAACTTAAATCAGAAATGCACTGGTGGCTGATGTGTCCCATACACTAATAACATACCATAACGATGCAAACCCGTGCACATTTGCATGGACTCTACACTATTTAATATGTATGTTACAGTAAGTTTACTTTTCAGTAGTTGCCATGTTAATGCAACTAAACCT ]
[+] EMBL CA329897 [ CCCACGAGACGAAGCATTTCATTTACTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCAGGCTGAAAATTGTTCTTAGGAGCATTGAGGGTTTTTTTTTCCTCCCTAAACTTAAATCAGAAATGCACTGGTGGCTGATGTGTCCCATACACTAATAACATACCATAACGATGCAAACCCGTGCACATTTGCATGGACTCTACACTATTTAATATGTATGTTACAGTAAGTTTACTTTTCAGTAGTTGCCATGTTAATGCAACTAAACCTTTCTTTCCCCCCCCTTGTTTTGCCTTTAAATTCAGTTGTACGAGACATTAACATGGCCCTTGATTGTATAAATAAAGGAAAGCTGTAGAATGTAGTCGTGCATCGGCTTTCCTTCACACCAAACTCCGAGTGTTGGATTAGATGGTTTAAAAAAAATAAATAGTGTGAGCACCAGTTTAACAACCCCTCATAAAAATTGTGCATTTTTCGCGCCACTTTCAAGGGGAACGTTACCTGCAGGTGCCAACCCAAAACCTTCATGC]
consensusID : consensus_2388#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 530 fasta sequence
[CACTTCGCGAGAGTTGTCGCTGCCAGTGCTGTCCTCTCTTCAAAGATCAATTTACAGCACACGGAAGAGCAAAAGAGCAACCATGTCTGAAAGGAAGGCAGTGATCAAAAATGCCGACATGTCGGAGGACATGCAGCAGGACGCCGTGGAGTGCGCCACGCAGGCTCTGGAGAAGTTCAACATTGAGAAGGATATCGCTGCCTACATCAAAAAGGAGTTTGACAAGAAATATAACCCGACCTGGCACTGCATCGTGGGAAGGAACTTCGGCAGCTACGTGACTCACGAGACCAAGCACTTCATTTATTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCTGGCTGAAGGGAGGAAGGAAGGAATGTCTTCATGAGCTGACTGTAAACACTATACTGACTGACTCCACAAAGGCACTTATCATTCCTTGGCGAGGGGCCGCTGCCTTTTCTGTTGATTTCTATGTTCCATTTTTGAGGATTACAAAAACTGTGGCCATGTTAAAAAAAAAATAAACAGTTCTATT]
[+] EMBL FR0057218 [CACTTCGCGAGAGTTGTCGCTGCCAGTGCTGTCCTCTCTTCAAAGATCAATTTACAGCACACGGAAGAGCAAAAGAGCAACCATGTCTGAAAGGAAGGCAGTGATCAAAAATGCCGACATGTCGGAGGACATGCAGCAGGACGCCGTGGAGTGCGCCACGCAGGCTCTGGAGAAGTTCAACATTGAGAAGGATATCGCTGCCTACATCAAAAAGGAGTTTGACAAGAAATATAACCCGACCTGGCACTGCATCGTGGGAAGGAACTTCGGCAGCTACGTGACTCACGAGACCA ]
[+] EMBL CA844543 [ CTCTTCAAAGATCAATTTACAGCACACGGAAGAGCACAAGAGCAACCATGTCTGAAAGGAAGGCAGTGATCAAAAATGCCGACATGTCGGAGGACATGCAGCAGGACGCCGTGGAGTGCGCCACGCAGGCTCTGGAGAAGTTCAACATTGAGAAGGATATCGCTGCCTACATCAAAAAGGAGTTTGACAAGAAATATAACCCGACCTGGCACTGCATCGTGNGAAGGAACTTCGGCAGCTACGTGACTCACGAGACCAAGCACTTCATTTATTTCTACCTGGGCCAGGTGGCCATCCTG ]
[+] EMBL CA847257 [ ATGTCTGAAAGCCTGGCAGTGATCAAAAATGCCGACATGTCGGAGGACATGCAGCAGGACGCCGTGGAGTGCGCCACGCAGGCTCTGGAGAAGTTCAACATTGAGAAGGATATCGCTGCCTACATCAAAAAGGAGTTTGACAAGAAATATAACCCGACCTGGCACTGCATCGTGGGAAGGAACTTCGGCAGCTACGTGACTCACGAGACCAAGCACTTCATTTATTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCTGGCTGAAGGGAGGAAGGAAGGAATGTCTTCATGAGCTGACTGTAAACACTATACTGACTGACTCCACAAAGGCACTTATCATTCCTTGGCGAGGGGCCGCTGCCTTTTCTGTTGATTTCTATGTTCCATTTTTGAGGATTACAAAAACTGTGGCCATGTTAAAAAAATA ]
[+] EMBL CA330722 [ CTGTTGATTTCTATGTTCCATTTTTGAGGATTACAAAAACTGTGGCCATGTTAAAAAAAAAATAAACAGTTCTATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2388#0 ACGTCCCCTGCTGGTTCCGAACCGCGCGAGCGAGCACTTAAGGAGCGCTTAGAAGACCAG 60
consensus_2388#1 --------CACTTCGCGAGAGTTGTCGCTGCCAGTGCT--GTCCTCTCTTCAAAGATCAA 50
** ** * ** ** ** * *** **** **
consensus_2388#0 GCATCGTCGT-CATCGTCGTCCTCTCGCAACCATGACTGACAGGAAAGCCGTGATTAAGA 119
consensus_2388#1 TTTACAGCACACGGAAGAGCAAAAGAGCAACCATGTCTGAAAGGAAGGCAGTGATCAAAA 110
* * * * ********* **** ***** ** ***** ** *
consensus_2388#0 ACGCGGACATGTCCGAGGACATGCAGCAGGACGCGGTGGACTGTGCCACCCAGGCCATGG 179
consensus_2388#1 ATGCCGACATGTCGGAGGACATGCAGCAGGACGCCGTGGAGTGCGCCACGCAGGCTCTGG 170
* ** ******** ******************** ***** ** ***** ***** ***
consensus_2388#0 AGAAGTACAACATCGAGAAGGACATCGCAGCCTTCATCAAGAAGGAGTTTGACAAGAAGT 239
consensus_2388#1 AGAAGTTCAACATTGAGAAGGATATCGCTGCCTACATCAAAAAGGAGTTTGACAAGAAAT 230
****** ****** ******** ***** **** ****** ***************** *
consensus_2388#0 ACAATCCCACCTGGCACTGCATCGTCGGGAGGAACTTCGGCAGCTACGTGACCCACGAGA 299
consensus_2388#1 ATAACCCGACCTGGCACTGCATCGTGGGAAGGAACTTCGGCAGCTACGTGACTCACGAGA 290
* ** ** ***************** ** *********************** *******
consensus_2388#0 CGAAGCATTTCATTTACTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCAGGCT 359
consensus_2388#1 CCAAGCACTTCATTTATTTCTACCTGGGCCAGGTGGCCATCCTGCTCTTCAAATCTGGCT 350
* ***** ******** ************************************** ****
consensus_2388#0 GAAAATTGTTCTTAGGAGCATTGAGGGTTTTTTTTTCCTCCCTAAACTTAAATCAGAAAT 419
consensus_2388#1 GAAG----------GGAGGAAGGAAGGAATGTCTT-----CATGAGCT--GACTGTAAAC 393
*** **** * ** ** * * ** * * * ** * ***
consensus_2388#0 GCACTGGTGGCTGATGTGTCCCATACACTAATAACATACCATAACGATGCAAACCCGTGC 479
consensus_2388#1 ACTATACTGACTGACTCCACAAAGGCACT--TATCATTCCTTGGCGAGG--GGCCGCTGC 449
* * ** **** * * **** ** *** ** * *** * ** ***
consensus_2388#0 ACATTTGCATGGACTCTACACTATTTAATATGTATGTTACAGTAAGTTTACTTTTCAGTA 539
consensus_2388#1 CTTTTCTGTTGATTTCTATGTTCCATT-TTTGAGGATTACAAAAACT------------- 495
** ** **** * * * ** ***** ** *
consensus_2388#0 GTTGCCATGTTAATGCAAC--TAAACCTTTCTTTCCCCCCCCTTGTTTTGCCTTTAAATT 597
consensus_2388#1 GTGGCCATGTTAAAAAAAAAATAAACAGTTCTATT------------------------- 530
** ********** ** ***** **** *
consensus_2388#0 CAGTTGTACGAGACATTAACATGGCCCTTGATTGTATAAATAAAGGAAAGCTGTAGAATG 657
consensus_2388#1 ------------------------------------------------------------
consensus_2388#0 TAGTCGTGCATCGGCTTTCCTTCACACCAAACTCCGAGTGTTGGATTAGATGGTTTAAAA 717
consensus_2388#1 ------------------------------------------------------------
consensus_2388#0 AAAATAAATAGTGTGAGCACCAGTTTAACAACCCCTCATAAAAATTGTGCATTTTTCGCG 777
consensus_2388#1 ------------------------------------------------------------
consensus_2388#0 CCACTTTCAAGGGGAACGTTACCTGCAGGTGCCAACCCAAAACCTTCATGC 828
consensus_2388#1 ---------------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |