Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2398 cluster # 2398       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2398#0 length = 744 sequences # 6  

consensusID : consensus_2398#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 744
fasta sequence
                              [ATTTACAACCAGAGGAGCTTTATTAAGTGTCCGACAAAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTCGATACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATTTGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCACCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAGGGAACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGTGGGATAATTCTCCAGGTAGATTGACAGAGCGGCCTCCACAGCG-CCCCCACCTGGAACGACACACTT-GGACTCCAGCACCCTCTTGACCACACAGAGAGCGTCGTGCAATGAGCGCTCCATCTCGTCGCACATGAAGTCGTTGGCCCCGCGCAGAACGATGGACGCTGATGTGCGTGCTTTGGTGTTTTTGACCAAGATGAGCTCATCGTCGCAGA]

[+] EMBL CA331143             [ATTTACAACCAGAGGAGCTTTATTAAGTGTCCGACAAAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCTTCTATACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATTTGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCACCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAGGGAACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGTGGCATAATTCTCCAGGAAGATTGACAGAGCGGCCTCCACAGCG CCCCCACCTGGAACGGACCACTT GGACTTCAG                                                                                                                                            ]
[+] EMBL CA329515             [   TACAACCAGAGGAGCTTTTTTAAGTGTCCGACAAAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATTCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTTTTTACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATTTGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCACCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAGGGAACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAA CCATGCTGGTGGGATAATTCTCCAGGTAGATTGACAGAGCGGGCTCCACAGCGCCCCCCACCTGGAACGACACACTT GGACTC                                                                                                                                               ]
[+] EMBL CA329403             [        CCAGAGGAGCTTTATTATTTGTCCGACAAAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTCGATACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATTTGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCACCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAAGGAACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGTGGGATAATTCTCCAGGTAGATTGACAGAGCGGCCTCCACAGCG CCCCCACCTGGAACGACCCACTTGGGACTCCAGCACCCTCTTGACCCCACAAAG                                                                                                                       ]
[+] EMBL CA332003             [         CAGAGGAGCTTTATTAAGTGTCCGACACAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAACCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTCGATACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGCTGTCTCGCGGTTTGCCGCTCACCAGGTCCAGACCGATCCCTTTGCGATTCTTGGGTTCGGGGGTAACCTGACCTTCATTGTGGAAGGCTCGGACCTTAACCCCCATGCCCCTGGc                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA331405             [          AGAGGAGCTTTATTAAGTGTCCGACCAAACTGAAAAGGTAGAGCAGTAACCAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAACACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGTACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTCGATACGGAGGATGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGTACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATTTGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCACCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAGGGGACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGGGGGATAATTCTCCAAGGAGAATGACAGAAGGGGCTCCCCAG G GCCCCACCTGGAA GAAACCCTT GG                                                                                                                                                   ]
[-] EMBL FR0058011            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGAGGAGGGAACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGTGGCATAATTCTCCAGGTAGATTGACAGAGCGGCCTCCACAGCG CCCCCACCTGGAACGACACACTT GGACTCCAGCACCCTCTTGACCACACAGAGAGCGTCGTGCAATGAGCGCTCCATCTCGTCGCACATGAAGTCGTTGGCCCCGCGCAGAACGATGGACGCTGATGTGCGTGCTTTGGTGTTTTTGACCAAGATGAGCTCATCGTCGCAGA]


>consensus_2398#0 ATTTACAACCAGAGGAGCTTTATTAAGTGTCCGACAAAACTGAAAAGGTAGAGCAGTAAC CAGGCAAAGTGCACAGCCTATACTAGAGCCAGAGCCACCAAGAGCTCCGTTTGTTTAAAC ACAGACAACCAGCAACGGCGTTTTATCCCTCCAGAGAACCAGACTGCACAGCGTCCCTGT ACGACTGGCCGCCCTCCTTCTGCTCGGGGAATAATTTGATGAGGTCGTCGATACGGAGGA TGGTGATGGCGGCCTCTGTGGCAAACTTCAGACTCTTTGTTTTGACCGTGATGGGCTCGT ACACGCCGGCTTGACGGTTGTCTCGTGGTTTGCCGTTCACCAGGTCCAGACCGATCCATT TGAGATTCTTGCGTTCGGGGTTAACCTGAGCTTCATTGTGGAAGGCTCGGAGCTTAGCCA CCAGGTCAGTGGAGTCCTGTGCTGCGTTCACGGCCAGCGTCTTGGGAATCACGAGGAGGG AACGGGCAAACTCTGCAATAGCCAGCTGCTCTCGGGAACCCATGCTGGTGGGATAATTCT CCAGGTAGATTGACAGAGCGGCCTCCACAGCGCCCCCACCTGGAACGACACACTTGGACT CCAGCACCCTCTTGACCACACAGAGAGCGTCGTGCAATGAGCGCTCCATCTCGTCGCACA TGAAGTCGTTGGCCCCGCGCAGAACGATGGACGCTGATGTGCGTGCTTTGGTGTTTTTGA CCAAGATGAGCTCATCGTCGCAGA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)