Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2475 cluster # 2475       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2475#0 length = 1083 sequences # 6  
consensusID : consensus_2475#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1083
fasta sequence 
                              [CCTCAGCTCTGGCTAGGCTAGCTAATTAATTTCGGCATCGCAGTGT-GGAGGAAACCTTTGGAAATAGAGTGCAGTCAAGCCGTGTGATTCAGAGCTGGTAGCAGAACAGGAGGGACAGCACCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACGATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGTGCTGATGATGCAGCGTGTCTTCA-GGGGGAAACTTCAAAGTAATGATGAGGTTACCATCAAATACAAGGATGAAGATGATGATCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGTGCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCAGTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCCTGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAATCAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTCCAGTTAGTGCAGCCAGCATGTCGGCCTTTGACCCCTTAAAGAACCAGGACGAGGTCAACAAGAATGTCATCTCTGCTTTTGGCCTGAGTGAGGAGCAGGCCCCAGTTGCTCACCCAGCAGTTGCAGCAGAGGAGCGCTCGGCAACCCCCGACAGCATTGCCTCATCCTCCTCTGCAGCCCCTCAGCCAGCTGTGCCCCCCCAACCACAGGCTCCATACCCAGGAGTACAGCAGGGACCACCTTCTGGAATGGATGGCCAGGTGTACCAGCAGTACCAGGCTCCAGGTGGTTACCCGCCCCAACAGCCCGGCGCTCCGCCCCAGCAGCAGCAGTATGCTATGCAGTACTCTGGTAAGACTAAAGCTGGGTCGGGTAAAAGGAAATGAGTGCTGTAGAATGAAATGTTGCTCATTCCTCTTTGGGGGAAAAAAAAATCAAGAAATTCTTCCTTCCTCCCTCCATCATTCCCTCCACAGGATACAG]

[+] EMBL CA332714             [CCTCAGCTCTGGCTAGGCTAGCTAATTAATTTCGGCATCGCAGTGT GGAGGAAACCTTTGGAAATAGAGTGCAGTCAAGCCGTGTGATTCAGAGCTGGTAGCAGAACAGGAGGGACAGCACCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACGATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGTGCTGATGATGCAGCGTGTCTTCA GGGGGAAACTTCAAAGTAATGATGAGGTTACCATCAAATACAAGGATGAAGATGATGATCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGTGCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCAGTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCCTGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAATCAATAGATGGACCCGAAAGCAAAAGGGTTGCAGCCGATCCCACAATGAACCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BU808060             [  TCAGCTCTGGCTAGGCTAGCTAATTAATTTCGGCATCGCAGTGT GGAGGAAACCTTTGGAAATAGAGTGCAGTCAAGCCGTGTGATTCAGAGCTGGTAGCAGAACAGGAGGGACAGCACCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACGATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGTGCTGATGATGCAGCGTGTCTTCA GGGGGAAACTTCAAAGTAATGATGAGGTTACCATCAAATACAAGGATGAAGATGATGATCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGTGCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCAGTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCCTGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAATCAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTCCAGTTAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0059724            [                            ATTTCTTTATCGCAGNGTCGGAGGAAACCTTGGGGGATAGTATTCAGTCAACCCGTGTTATTCACACCTTGTAGCACAACAGTAGTGACAGCACCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACGATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGCGCTGATGATGCAGCGTGTCTTCAGGGGGGAAACTTCAAAGTAATGATGAGGGTACCATCAAATACAAGGATGAAGATGATGATCTTATTACCATCTTTGACAGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BU805913             [                                         AGTGT GGAGGAAACCTTTGGAAATAGAGTGCAGTCAAGCCGTGTGATTCAGAGCTGGTAGCAGAACAGGAGGGACAGCACCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACGATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGTGCTGATGATGCAGCGTGTCTTCA GGGGGAAACTTCAAAGTAATGATGAGGTTACCATCAAATACAAGGATGAAGATGATGATCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGTGCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCAGTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCCTGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAATCAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTCCAGTTAGTGCAGCCAGCATGTCGGCCTTTGACCCCTTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA332700             [                                                                                                                                                                                                                                                                                                                           TCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGTGCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCAGTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCCTGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAATCAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTCCAGTTAGTGCAGCCAGCATGTCGGCCTTTGACCCCTTAAAGAACCAGGACGAGGTCAACAAGAATGTCATCTCTGCTTTTGGCCTGAGTGAGGAGCAGGCCCCAGTTGCTCACCCAGCAGTTGCAGCAGAGGAGCGCTCGGCAACCCCCGACAGCATTGCCTCATCCTCCTCTGCAGCCCCTCAGCCAGCTGTGCCCCCCCAACCACAGGCTCCATACCCAGGAGTACAGCAGGGACCACCTTCTGGAATGGATGGCCAGGTGTACCAGCAGTACCAGGCTCCAGGTGGTTACCCGCCCCAACAGCCCGGCGCTCCGCCCCAGCAGCAGCAG                                                                                                                                                       ]
[+] EMBL CA847151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCTGGAGCCTCCCACAGAGCCTGGTCTCACCGCCACAGCACCTGAAAGTGAATCAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTCCAGTTAGTGCAGCCAGCATGTCGGCCTTTGACCCCTTAAAGAACCAGGACGAGGTCAACAAGAATGTCATCTCTGCTTTTGGCCTGAGTGAGGAGCAGGCCCCAGTTGCTCACCCAGCAGTTGCAGCAGAGGAGCGCTCGGCAACCCCCGACAGCATTGCCTCATCCTCCTCTGCAGCCCCTCAGCCAGCTGTGCCCCCCCAACCACAGGCTCCATACCCAGGAGTACAGCAGGGACCACCTTCTGGAATGGATGGCCAGGTGTACCAGCAGTACCAGGCTCCAGGTGGTTACCCGCCCCAACAGCCCGGCGCTCCGCCCCAGCAGCAGCAGTATGCTATGCAGTACTCTGGTAAGACTAAAGCTGGGTCGGGTAAAAGGAAATGAGTGCTGTAGAATGAAATGTTGCTCATTCCTCTTTGGGGGAAAAAAAAATCAAGAAATTCTTCCTTCCTCCCTCCATCATTCCCTCCACAGGATACAG]




>consensus_2475#0
CCTCAGCTCTGGCTAGGCTAGCTAATTAATTTCGGCATCGCAGTGTGGAGGAAACCTTTG
GAAATAGAGTGCAGTCAAGCCGTGTGATTCAGAGCTGGTAGCAGAACAGGAGGGACAGCA
CCATGAACGGCCAGCTAGACCTAAGTGGGAAGCTGATCATCAAAGCCCAGTTAGGCGACG
ATATCAGACGCATCCCCATCCACAACGAAGACATCACCTACGATGAGCTGGTGCTGATGA
TGCAGCGTGTCTTCAGGGGGAAACTTCAAAGTAATGATGAGGTTACCATCAAATACAAGG
ATGAAGATGATGATCTTATTACCATCTTTGACAGCTCTGACCTCTCTTTTGCCATTCAGT
GCAGTAGAATACTCAAACTGACTCTGTTTGTGAACGGTCAGCCGCGGCCCTTGGAGTCCA
GTCAGGTGAAGTACCTGCGCAGGGAGCTGATTGAGCTCAGGAAGAAAGTCAACAACCTCC
TGGATAGCCTGGAGCCTCCCACAGAGCCCGGTCTCACCGCCACAGCACCTGAAAGTGAAT
CAGTAGATGGACGTGAAGGCAAAGTGGTTGCAGCCGATCCCACAATGAAACAGGCCACTC
CAGTTAGTGCAGCCAGCATGTCGGCCTTTGACCCCTTAAAGAACCAGGACGAGGTCAACA
AGAATGTCATCTCTGCTTTTGGCCTGAGTGAGGAGCAGGCCCCAGTTGCTCACCCAGCAG
TTGCAGCAGAGGAGCGCTCGGCAACCCCCGACAGCATTGCCTCATCCTCCTCTGCAGCCC
CTCAGCCAGCTGTGCCCCCCCAACCACAGGCTCCATACCCAGGAGTACAGCAGGGACCAC
CTTCTGGAATGGATGGCCAGGTGTACCAGCAGTACCAGGCTCCAGGTGGTTACCCGCCCC
AACAGCCCGGCGCTCCGCCCCAGCAGCAGCAGTATGCTATGCAGTACTCTGGTAAGACTA
AAGCTGGGTCGGGTAAAAGGAAATGAGTGCTGTAGAATGAAATGTTGCTCATTCCTCTTT
GGGGGAAAAAAAAATCAAGAAATTCTTCCTTCCTCCCTCCATCATTCCCTCCACAGGATA
CAG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)