Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2530 cluster # 2530       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2530#0 length = 618 sequences # 7  

consensusID : consensus_2530#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 618
fasta sequence
                              [TTACATGGAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG-AGCCAGTGAAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCAGCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAGCAGCTCCAGGCTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTTCCACTTTGCACAACAGGTGGG]

[+] EMBL CA331032             [TTACATGGAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAATACACACACCCACCCACGCG AGCCAGTGAAGATTCTAAAAGGAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGG                                                                                                                                                                                       ]
[+] EMBL CA331829             [   CATGGAGAGGTTTTTATTATCCCGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCGTAGCCAGTGAAGATTCTAAAAGGAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCAGCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAGCAGCTCCAGGGTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTTTCACTTTGC            ]
[+] EMBL CA329178             [    ATGGAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG AGTCAGTGAAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCAGCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAGCAGCTCCAGGCTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTTCCACTTTGCACAACAGGTGGG]
[+] EMBL CA331666             [    ATGGAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG AGCCAGTGAAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCAGCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAGCAGCTCCAGGCTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTT                     ]
[+] EMBL CA331983             [       GAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG AGCCAGTGAAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTTGGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCAGCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAGCAGCTCCAGGCTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTTCCACTT               ]
[+] EMBL CA329526             [         GAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG AGCCAGTGTAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGA                                                                                                                                                                                                                             ]
[-] EMBL FR0055518            [                   TTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGAAGCAAAACCCAGAGCAGATGCCAAAGCAGAGACGATTACATACATCACATAAACCGTTTCTATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAGTGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCG AGCCAGTGAAGATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTTGGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCACATCAGTGGAATCATCAT                                                                                                                                                                                                                                                ]


>consensus_2530#0 TTACATGGAGAGGTTTTTATTATCCTGCGCAGATGAGCCTACATCATCAGGTCTGAAGGA AGCAAAAACCAGAGCAGATGGCCAAGCAGAGACGATTACATACATCACATAAACCGTTTC TATACTTGCAGACTGTATGCAAGATGGTGCAGGGACACTCAGGGAACAACTATGCATAAG TGACACAGCAATACTCATTCTCACACAAACACACACACCCACCCACGCGAGCCAGTGAAG ATTCTAAAAGCAGCAGTAGAACTTCAAACACATCGGAGATCAAACCCAGTTTCAGGTGTT GGGACCATCAGGTGACCAGTCAGCAGGTTAACCTGGAAAAACAGTGTCCACCTCCCCCCA CATCAGTGGAATCATCATCAGGTTGTGATAAGGCAGAGGGCTCCGCTGCATTCTGCGTTT GGAGAAGCTCTCAGGAATCTTGTGACAAACACACACGTCCACACAAGCACACACACTTCA GCTGATGGAAGTTTAGATGCTGCTCAGAGCATCCACGCCTGGCAGCACTTTACCCTCCAG CAGCTCCAGGCTGGCACCACCTCCAGTGCTCACGTGACTGACCTTATCTTCTGTGTTCCA CTTTGCACAACAGGTGGG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)