Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2535 cluster # 2535       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2535#0 length = 900 sequences # 6  
consensusID : consensus_2535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 900
fasta sequence 
                              [CCGTTTTTTTAAATCTGATCTTTTAGCTGACCTCGTTTAAAAAACAACGTAAACATCCTCCACCGGGTGCCGGTCACAGAAACGGAGCACATTAAAATGCACTAAATATGTTGAAGTTGTGACTTTTTTTTTCTCTTTTTTTAAATTTGGAGACGCGAAGAGTCTCTCCTGGAATGTATCGCCAAACTCAGGCCTCAGACATCCAATAAAATACCCCGGTGGGAAAAGTCGTGCATGTTGACGTGAGGCAGGAAGGGAACGGTTTCATCGTGGTCGTCCAAATTCGCCATTGCTCAGTTGCATTATTGCCACTTTCACATTTGAGGTGTTTGACATGTCGTAGAATGTATCGTAACTGTACAACCGATGGTAGAATACATGACATTTACACATGGGAAGTGCCAATAATTGCTATCCGGAGGTGTTTTCAGATGTATTCCTTC-TTTTTTTTGTGTTTCATCTTCTAAACATGGATGATTTTGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAAAGTTGTTCTGGTGAAAGAAAAGAAAAAAAAAGAAATCTTAGTTTCCATGATCTGTAATCGTAGACGTATCCTTTGTTTTTCTTCATTTTGCTTTTTAAAAAATTCTTTTCCCCCCCTTTTTTCTTTTTACTTACAAATGCAGAAAATAGACAAAAAAAAAATCTGAGCTTACCCAAGAAGAAAAGCTGTCTCGTGATCATGTCAGTACATCTTTATCGGTGTTCGGTTTTCTTTTCCTTGGGTATGTCGTGATGAACTGCTGTAAATTTGTACAGTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTTTGGAAGAAAAAAGTTTTTTTTCTCTGTAATAAAAGATTTCCTATCTTGGCATCATAAAAA]

[-] EMBL CA331673             [CCGTTTTTTTAAATCTGATCTTTTAGCTGACCTCGTTTAAAAAACAACGTAAACATCCTCCACCGGGTGCCGGTCACAGAAACGGAGCACATTAAAATGCACTAAATATGTTGAAGTTGTGACTTTTTTTTTCTCTTTTTTTAAATTTGGAGACGCGAAGAGTCTCTCCTGGAATGTATCGCCAAACTCAGGCCTCAGACATCCAATAAAATACCCCGGTGGGAAAAGTCGTGCATGTTGACGTGAGGCAGGAAGGGAACGGTTTCATCGTGGTCGTCCAAATTCGCCATTGCTCAGTTGCATTATTGCCACTTTCACATTTGAGGTGTTTGACATGTCGTAGAATGTATCGTAACTGTACAACCGATGGTAGAATACATGACATTTACACATGGGAAGTGCCAATAATTGCTATCCGGAGGTGTTTTCAGATGTATTCCTTC TTTTTTTTGTGTTTCATCTTCTAAACATGGATGATTTTGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAAAGTTGTTC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0056732            [                                                                                                                                                                                                                                                     AGGCAGGAAGGGAACGGTTTCATCGTGGTCGTCCAAATTCGCCATTGCTCAGTTGCATTATTGCCACTTTCACATTTGAGGTGTTTGACATGTCGTAGAATGTATCGTAACTGTACAACCGATGGTAGAATACATGACATTTACACATGGGAAGTGCCAATAATTGCTATCCGGAGGTGTTTTCAGATGTATTCCTTCTTTTTTTTTGTGTTCCATCTTCTAAACAGGGATGATTTTGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAGAGTTGT                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA329184             [                                                                                                                                                                                                                                                                                                                                       GTTTGACATGTCGTAGAATGTATCGTAACTGTACAACCGATGGTAGAATACATGACATTTACACATGGGAAGTGCCAATAATTGCTATCCGGAGGTGTTTTCAGATGTATTCCTTC TTTTTTTTGTGTTTCATCTTCTAAACATGGATGATTTTGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAAAGTTGTTCTGGTGAAAG AAAGAAAAAAAAAGAAATCTTAGTTTCCATGATCTGTAATCGTAGACGTATCCTTTGTTTTTCTTCATTTTGCTTTTTAAAAAATTCTTTTCCCCCCCTTTTTTCTTTTTACTTACAAATGCAGAAAATAGAC  AAAAAAAATCTGAGCTTACCCAAGAAGAAAAGCTGTCTCGTGATCATGTCAGTACATCTTTATCGGTGTTCGGTTTTCTTTTCCTTGGGTATGTCGTGATGAACTGCTGTAAATTTGTACAGTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTTTGGAAGAAAAAAGTTTTTTTTCTCTGTGATAAAAGATTTCCTATCTTGGCA         ]
[+] EMBL CA847270             [                                                                                                                                                                                                                                                                                                                                                                                                            AAGTGCCAATAATTGCTATCCGGAGGTGTTTTCAGATGTCTTCCTTC TTTTTTTTGTGTTTCATCTTCTAAACATGGATGATTTTGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAAAGTTGTTCTGGTGAAAGAAAAAAAAAAAAAAGAAATCTTAGTTTCCATGATCTGTAATCGTAGACGTATCCTTTGTTTTTCTTCATTTTGCTTTTTTAAAAATTCTTTTCCCCCCCTTTTTTCTTTTTACTTACAAATGCAGAAAATAGACAAAAAAAAAATCTGAGCTTACCCAAGAAGAAAAGCTGTCTCGTGATCATGTCAGTACATCTTTATCGGTGTTCGGTTTTCTTTTCCTTGGGTATGTCGTGATGAACTGCTGTAAATTTGTACAGTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTTTGGAAGAAAAAAGTTTTT                                          ]
[+] EMBL CA845041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTATGTCGTGATGAACTGCTGTAAATTTGTACAGTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTTTGGAAGAAAAAAGTTTTTTTTCTCTGTAATAAAAGATTTCCTATCTTGGCAT        ]
[+] EMBL CA330619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGTGATGAACTGCTGTAAATTTGTACTTTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTTTGGAAGAAAAAAGTTTTTTTTCTCTGTAATAAAAGATTTCCTATCTTGGCATCATAAAAA]




>consensus_2535#0
CCGTTTTTTTAAATCTGATCTTTTAGCTGACCTCGTTTAAAAAACAACGTAAACATCCTC
CACCGGGTGCCGGTCACAGAAACGGAGCACATTAAAATGCACTAAATATGTTGAAGTTGT
GACTTTTTTTTTCTCTTTTTTTAAATTTGGAGACGCGAAGAGTCTCTCCTGGAATGTATC
GCCAAACTCAGGCCTCAGACATCCAATAAAATACCCCGGTGGGAAAAGTCGTGCATGTTG
ACGTGAGGCAGGAAGGGAACGGTTTCATCGTGGTCGTCCAAATTCGCCATTGCTCAGTTG
CATTATTGCCACTTTCACATTTGAGGTGTTTGACATGTCGTAGAATGTATCGTAACTGTA
CAACCGATGGTAGAATACATGACATTTACACATGGGAAGTGCCAATAATTGCTATCCGGA
GGTGTTTTCAGATGTATTCCTTCTTTTTTTTGTGTTTCATCTTCTAAACATGGATGATTT
TGTGAAGCCATTTCGTGACGGGAGCGTTGGCAAGGACCAAAGTTGTTCTGGTGAAAGAAA
AGAAAAAAAAAGAAATCTTAGTTTCCATGATCTGTAATCGTAGACGTATCCTTTGTTTTT
CTTCATTTTGCTTTTTAAAAAATTCTTTTCCCCCCCTTTTTTCTTTTTACTTACAAATGC
AGAAAATAGACAAAAAAAAAATCTGAGCTTACCCAAGAAGAAAAGCTGTCTCGTGATCAT
GTCAGTACATCTTTATCGGTGTTCGGTTTTCTTTTCCTTGGGTATGTCGTGATGAACTGC
TGTAAATTTGTACAGTTCATGTAAATTGATTGTGCGGAAGTTGTACAGATTTCTATATTT
TGGAAGAAAAAAGTTTTTTTTCTCTGTAATAAAAGATTTCCTATCTTGGCATCATAAAAA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)