Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2542 cluster # 2542       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2542#0 length = 720 sequences # 7  

consensusID : consensus_2542#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 720
fasta sequence
                              [GTTTAATTGACCTGTCAGCACTGTAGTATCAGCTGTCACTGCTGGTTATTTGCATGTCCGTCTGTTAGTCGCACCTTTCTTTTATCCGACCCACAGGATTACTTTAATATACCGTTGTAGTTTGCATCGGCTAATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG-GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG-ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCCACTCGGGCCATGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCAATACACACCTGATCGTCGGAGTGTGCAGTGATGACATGACCCACAAATACAAGGGCTTCACGGTGATGAACGAGGACGAGCGCTACGACGCCATCAGACACTGCCGCTACGCCGACGAAGTTGTGAGGGACG]

[+] EMBL CA591107             [GTTTAATTGACCTGTCAGCACTGTAGTATCAGCTGTCACTGCTGGTTATTTGCATGTCCGTCTGTTAGTCGCACCTTTCTTTTATCCGACCCACAGGATTACTTTAATATACCGTTGTAGTTTGCATCGGCTAATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCCACTCGGGCCACGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCCATACACACCTGATCGTCGGAGTGTGCAGTGATGACATGACCCACAAATACAAGGGC                                                                            ]
[+] EMBL BU807369             [                               GCTGTCACTGCTGGTTATTTGCATGTCCGTCTGTTAGTCGCACCTTTCTTTTATCCGACCCACAGGATTACTTTAATATACCGTTGTAGTTTGCATCGGCTAATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCCCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACC                                                                                                                                                                                                                                   ]
[+] EMBL CA588682             [                                                      cGTACAACTGCTAGNCGCACCTTTCTTTTATCCGACCCACACGATAACAATAATATACCGTTGTAGTTTGCATCGGCTAATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGGTTATTCTGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCCACTCGGGCCATGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCAATACACACCTGATCGTCGGAGTGTGCAGTGATGACATGACCCACAAAT                                                                                    ]
[+] EMBL FR0064049            [                                                                TTAGTCGCACCTTTCTTTTATTCGACCCACAGGATTACTTTAATATACGGTTGTAGTTTGCATCGGCTAATTTGCACGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGGAATAAACCCTATAAACGAGTCAGCATGGACc                                                                                                                                                                                                                                                         ]
[+] EMBL BU805343             [                                                                                              AGGATTACTTTAATATACCGGTGTAGGTTGCATCGGGTAATTTGCAAGGTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTTTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGTATGTTCAGAGCTCCAGCGAGCTGGTGGTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGANTGGGAAAATCCCCAAATGGACCGTGG GACTGAGGGAGCCCGGACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACCAGTCAGCATGGgg                                                                                                                                                                                                                                                          ]
[+] EMBL BU806635             [                                                                                                                                    AATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACAGAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCCACTCGGGCCATGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCAATACACACCTGATCGTCGGAGTGTGCAGTGATGACATGACCCACAAATACAAGGGCTTCACGGTGATGAACGAGGACGAGCGCTACGACGCCATCAGACACTGCCGCTACGCCGACGAAGTTGTGAGGGACG]
[+] EMBL CA591365             [                                                                                                                                                                                                                   GTTTGCTACTAAGACGAAGCGTTGAAGCCACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCAGCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGGGAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGG GACTGAGGCACCCCGCACCTTTCTCAGACGACCTCGAACCTGCGG ATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGCGGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCCACTCGGGCCATGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCAATACACACCTGATCGTCGGAGTGTGCAGTGATGACATGACCCACAAATACAAGGGCTTCACGG                                                                     ]


>consensus_2542#0 GTTTAATTGACCTGTCAGCACTGTAGTATCAGCTGTCACTGCTGGTTATTTGCATGTCCG TCTGTTAGTCGCACCTTTCTTTTATCCGACCCACAGGATTACTTTAATATACCGTTGTAG TTTGCATCGGCTAATTTGCAAGCTATAAGCTAGCTGCCAAACCAGCTTTAGCATTGGACA GAGGGTTAGCATCGTTAGCTAGCTCTATGCTGTTTGCTACTAAGACGAAGCGTTGAAGCC ACCCACTTGTCTGAAGCAGCAGCCCCTAAAAAGAAAGAACAATGCAGGCCCAGAGCTCCA GCGAGCTGCTGCTGTCCAGAAAACGAAAGAGAGATGGTTCCAATGGCGAGATGGAGGAGG GAGAGAGGAGTGGGAAAATCCCCAGATGTACCGTGGGACTGAGGCACCCCGCACCTTTCT CAGACGACCTCGAACCTGCGGATAAACCCTATAAACGAGTCAGCATGGACGAAGCAAAGC GGGGGACGTCACCTGACCGACCGGTGCGGGTGTATGCAGATGGCATCTTTGACGTTTTCC ACTCGGGCCATGCCAGAGCGCTGATGCAGGCTAAGTGCCTTTTCCCCAATACACACCTGA TCGTCGGAGTGTGCAGTGATGACATGACCCACAAATACAAGGGCTTCACGGTGATGAACG AGGACGAGCGCTACGACGCCATCAGACACTGCCGCTACGCCGACGAAGTTGTGAGGGACG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)