Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2574 cluster # 2574       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2574#0 length = 982 sequences # 8  
consensusID : consensus_2574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 982
fasta sequence 
                              [ATGAAAGAACGGCGTGTTACTTACACTTTGAGTCAAACATAAGTAAAGTATAAAGTAGCGTTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTGTGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGGTGGAGAGCCCATGGAAATTAATGAACAGGTGGGAATGACTCCGGAGATCATCCAGAAGCTCCAAGACAAAGCTACCATCCTCACTACAGAAAGGAAGAAGAGGGGAAAAACTGTCCCAGAGGACTTGGTTAGAGCTGAGGATCTTGGCAAATATCACCAAGTGGCCTCGCATGTGGGTCTTCATAGTGCAAGTGTTCCTGGTATCCTGGCTCTGGATCTGTGTCCTTCAGACACCAGCAAAGTTCTCACTGGTGGAGCTGATAAGAATGTGGTGGTATTTGACAAAAATGAGGAGCAGATTGTGGCAACATTTAAGGGTCACACCAAGAAGGTCACCTCTGTTATTTACCATCCATCCCAGTCTGTGGTCTTCTCGGCATCT]

[+] EMBL BU808315             [ATGAAAGAACGGCGTGTTACTTACACTTTGAGTCAAACATAAGTAAAGTATAAAGTAGCGTTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTGTGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA589333             [ATGAAAGAACGGCGTGTTACTTACACTTTGAGTCAAACATAAGTAAAGTATAAAGTAGCGTTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTGTGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0060650            [                             GAGTCAAACATAAGTAAAGGATAAAGTAGCGTTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTGTGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGGGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCTTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA589298             [                                             AAGTATAAAGTAGCGTTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTGTGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGGACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGGTGGAGAGCCCATGGAAATTAATGAACAGGTG                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BU807613             [                                                                                                                                                               AGTGCCGGAGCACCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGGTGGAGAGCCCATGGAAATTAATGAACAGGTGGGAATGACTCCGGAGATCATCCAGAAGCTCCAAGACAAAGCTACCATCCTCACTACAGAAAGGAAGAAGAGGGGAAAAACTGTCCCAGAGGACTTGGTTAGAGCTGAGGATCTTGGCAAATATCACCAAGTGGCCTCGCATGTGGGTCTTCATAGTGC                                                                                                                                                                                                 ]
[+] EMBL CA846170             [                                                                                                                                                                       ACCATCCTTGCGTCTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGGTGGAGAGCCCATGGAAATTAATGAACAGGTGGGAATGACTCCGGAGATCATCCAGAAGCTCCAAGACAAAGCTACCATCCTCACTACAGAAAGGAAGAAGAGGGGAAAAACTGTCCCAGTGGACTTGGTTAGAGCTGAGGATCTTGGCAAATATCACCAAGTGGCCTCGCATGTGGGTCTTCATAGTGCAAGTGTTCCTGGTATCCTGGCTCTGGATCTGTGTCCTTCAGACACCAGCAAAGTTCTCACTGGTGGAGCTGATAAGAATGTGGTGGTATTTGACAAAAATGAGGAGCAGATTGTGGCAACATTTAAGGGTCACACCAAGAAGGTCACCTCTGTTATTTACCATCCATCCCAGTCTGTGGTCTTCTCGGCATCT]
[+] EMBL BU806294             [                                                                                                                                                                             CTTGCGTCTCCCCGGTGTCCAACCAGGTGCTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCATTCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGGTGGAGAGCCCATGGAAATTAATGAACAGGTGGGAATGACTCCGGAGATCATCCAGAAGCTCCAAGACAAAGCTACCATCCTCACTACAGAAAGGAAGAAGAGGGGAAAAACTGTCCCAGAGGACTTGGTTAGAGCTGAGGATCTTGGCAAATATCACCAAGTGGCCTCGCATGTGGGTCTTCATAGTGCAAGTGTT                                                                                                                                                                                          ]
[+] EMBL FR0060154            [                                                                                                                                                                                       CCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAGGTACATCGCAGAGAATGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGTCTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTCACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCAGACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCATTGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCT TTGCTACACTCAAGCCCCAAGCTGGATTGGTTGCCCCCCAGGCTATTGCTGGCTtcta                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_2574#0
ATGAAAGAACGGCGTGTTACTTACACTTTGAGTCAAACATAAGTAAAGTATAAAGTAGCG
TTATTAATTACACGATATAGGACCAACTGGATTTCATTTTTAGAAGTAACGCCATAATTG
TGTTGGGAAAATGTCTTTAGTTTGTGCAATCTGCAATGAAGTGCCGGAGCACCCTTGCGT
CTCCCCGGTGTCCAACCAGGTGTTTGAACGCAGGCTGATCGAGAAGTACATCGCAGAGAA
TGGGACGGATCCGATGAATGGGCAACCGTTGTCTGAAGAACAGCTCATAGATATAAAAGT
CTCGCATCCTATTCGGCCAAAAGCCCCCTCAGCAACAAGCATTCCTGCCATTCTTAAGTC
ACTTCAAGATGAGTGGGATGCTGTTATGCTTCATAGCTTCACCCTTCGACAACAGCTGCA
GACTACTCGCCAAGAACTGTCGCATGCTCTGTACCAACATGATGCCGCCTGCAGAGTCAT
TGCTCGACTCACCAAAGAGGTCACTGCTGCAAGAGAAGCTCTTGCTACACTCAAGCCCCA
AGCTGGATTGGTTGCCCCCCAGGCTATTGCTGCCTCTCAGCCAACTGCCGTGGGTGCTGG
TGGAGAGCCCATGGAAATTAATGAACAGGTGGGAATGACTCCGGAGATCATCCAGAAGCT
CCAAGACAAAGCTACCATCCTCACTACAGAAAGGAAGAAGAGGGGAAAAACTGTCCCAGA
GGACTTGGTTAGAGCTGAGGATCTTGGCAAATATCACCAAGTGGCCTCGCATGTGGGTCT
TCATAGTGCAAGTGTTCCTGGTATCCTGGCTCTGGATCTGTGTCCTTCAGACACCAGCAA
AGTTCTCACTGGTGGAGCTGATAAGAATGTGGTGGTATTTGACAAAAATGAGGAGCAGAT
TGTGGCAACATTTAAGGGTCACACCAAGAAGGTCACCTCTGTTATTTACCATCCATCCCA
GTCTGTGGTCTTCTCGGCATCT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)