Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2575 cluster # 2575       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2575#0 length = 870 sequences # 8  

consensusID : consensus_2575#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 870
fasta sequence
                              [AGTTCACGATAAATGCGGAAAAAACCGAGTGGATTGAAAACATCTGAATTAGTCACTGGACTCCGCTTTGAAGCCAACTGAAGGCACAAATCGACCACTTGGTAGGCTACAGCACAGCTATTTTGGAGCTTTTACTCTGTTTTGATAGATTTGATCTTCGGTTATTAATTCAGCGGGACTTTGCGCTGAAGACCAGACGGGACACTGACGCCTCGGTGCCTAAGAAGCGCCCTTTGCTGCGTACTCTTATATTCTGACTGTCTGATTTGAAATATGTCGACAATAATGGAACAACCTTTTTATGACGACTCGTTTCTCTCTGCTTATGGCCATCCAGGCGCAGCTCTGCCAGACTACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCACCTTCGCGCCGACAGTGATTTCTATTCTTCGGGGACGGACGTGGGNTCCCTGAAACTCGCTTCTCCTGAACTGGAGCGGCTGATCATCCAAAACAGCAACGGGGTCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGGAGGAGCAGGAGGGCTTCGCTGACGGCTTCGTCAAAGCATTGGACGACTTACACAAGATGAATCAGATGGCTCCTCCGAACGTGTCCATCGGTACCGGCGGCGTTCCCTGTCCGGCACCGGCAACCGTGTACGGGTCATCCATGCAGCCCGAGCCCCTAGAGTACACCACCTTGAGCAGCTGCACCACAAACTCCAGCCTCTCATCTGCAGCCAGCTACCCGTGCACCACTATCAGCTACCTGCCGCACCACCAGTACCACCCGCACTCCCAGGGTGTTGCG]

[+] EMBL BU807372             [AGTTCACGATAAATGCGGAAAAAACCGAGTGGATTGAAAACATCTGAATTAGTCACTGGACTCCGCTTTGAAGCCAACTGAAGGCACAAATCGACCACTTGGTAGGCTACAGCACAGCTATTTTGGAGCTTTTACTCTGTTTTGATAGATTTGATCTTCGGTTATTAATTCAGCGGGACTTTGCGCTGAAGACCAGACGGGACACTGACGCCTCGGTGCCTAAGAAGCGCCCTTTGCTGCGTACTCTTATATTCTGACTGTCTGATTTGAAATATGTCGACAATAATGGAACAACCTTTTTATGACGACTCGTTTCTCTCTGCTTATGGCCATCCAGGCGCAGCTCTGCCAGACTACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCACCTTCGCGCCGACAGTGATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL FR0058498            [                                ATTGAAAACATCTGAATTAGTCACTGGACTCCGCTTTGAAGCCAACTGAAGGCACAAATCGACCACTTGGTAGGCTACAGCACAGCTATTTTGGAGCTTTTACTCTGTTTTGATAGATTTGATCTTCGGTTATTAATTCAGCGGGACTTTGCGCTGAAGACCAGACGGGACACTGACGCCTCGGTGCCTAAGAAGCGCCCTTTGCTGCGTACTCTTATATTCTGACTGTCTGATTTGAAATATGTCGACAATAATGGAACAACCTTTTTATGACGACTCGTTTCTCTCTGCTTATGGCCATCCAGGCGCAGCTCTGCCAGACTACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL FR0062091            [                                                      ACTGGACTCCGCTTTGAAGGCAACTGAAGGCACAAATCGACCACTTGGTAGGCTACAGCACAGCTATTTTGGAGCTTTTACTCTGTTTTGATAGATTTGATCTTCGGTTATTAATTCAGCGGGACTTTGCGCTGAAGACCAGACGGGACACTGACGCCTCGGTGCCTAAGAAGCGCCCTTTGCTGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU807182             [                                                                                                                                                                                                                                                                                                                                            aCTTGGCGCAGCTCTGCCAGACTACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCACCTTCGCGCCGACAGTGATTTCTATTCTTCGGGGACGGACGNGTGNTCCCTGAAACTCGCTTCTCCTGAACTGGAGCGGCTGATCATCCAAAACAGCAACGGGGTCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGGAGGAGCAGGAGGGCTTCGCTGACGGCTTCGTCAAAGCATTGGACGACTTACACAAGATGAATCAGATGGCTCCTCCGAACGTGTCCATCGGTACCGGCGGCGTTCCCTGTCCGGCACCGGCAACCGTGTACGGGTCATCCATGCAGCCCGAGCCCCTAGAGTACACCACCTTGAGCAGCTGCACCACAAACTCCAGCCTCTCATCTGCAGCCAGCTACCCGTGCACCACT                                                   ]
[+] EMBL CA846725             [                                                                                                                                                                                                                                                                                                                                                     AGCTCTGCCAGACTACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCACCTTCGCGCCGACAGAGATTTCTATTCTTCGGGGACGGACGTGGGTTCCCTGAAACTCGCTTCTCCTGAACTGGATCTGCTGATCATCCAAAACAGCAACGGGGTCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGGAGGAGCAGGAGGGCTTCGCTGACGGCTTCGTCAAAGCATTGGACGACTTACACAAGATGAATCAGATGGCTCCTCCGAACGTGTCCATCGGTACCGGCGGCGTTCCCTGTCCGGCACCGGCAACCGTGTACGGGTCATCCATGCAGCCCGAGCCCCTAGAGTACACCACCTTGAGCAGCTGCACCACAAACTCCAGCCTCTCATCTGCAGCCAGCTACCCGTCCACCACTATCAGCTACCTGCCGCACCACCAGTACCACCCGCACTCCCAGGGTGTTGCG]
[+] EMBL CA844853             [                                                                                                                                                                                                                                                                                                                                                                   ACAAACTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAGTCGCAACAGCACCTTCGCGCCGACAGGGATTTCTATTCTTCGGGGACGGACGTGGGGTCCCTGAAACTCGCTTCTCCTGAACTGGTTTTTTTGATCATCCAAAACAGCAACGGGGGCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGCACGAGCACGAGGGCTTCGCTGACCGCTTCGTCAAAGCATTGGACGACTTACACTAGATGAATGAGATGGCTCCTCCGAACGTGGCCATCCGTACCGGCGGCGTTCCCTGACCGGCCCCGGCAACCGTGCACGGGCCATCCATCCAGCCCGAa                                                                                                                                 ]
[+] EMBL FR0061570            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tggggGAAACTCGCTTCTCCTGAACTGGAGCGGCTGATCATCCAAAACAGCAACGGGGTCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGGAGGAGCAGGAGGGCTTCGCTGACGGCTTCGTCAAAGCATTGGACGACTTACACAAGATGAATCAGATGGCTCCTCCGAACGTGTCCATCGGTACCGGCGGCGTTCCCTGTCCGGCACCGGCAACCGGGTACAGGTCATCCATGCAGCCCGAGCCCCTAGAGTACACCACCTTGAGCAGCTGCACCACAAACTCCAGCCTCTCATCTGCAGC                                                                      ]
[+] EMBL FR0061572            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACTAAACATCCAAAACAGCAACGGGGTCATCACTACAACACCCACACCTGCCCATTACCTTTACAATCAGTGTA                                                                                                                                                                                                                                                                                               ]


>consensus_2575#0 AGTTCACGATAAATGCGGAAAAAACCGAGTGGATTGAAAACATCTGAATTAGTCACTGGA CTCCGCTTTGAAGCCAACTGAAGGCACAAATCGACCACTTGGTAGGCTACAGCACAGCTA TTTTGGAGCTTTTACTCTGTTTTGATAGATTTGATCTTCGGTTATTAATTCAGCGGGACT TTGCGCTGAAGACCAGACGGGACACTGACGCCTCGGTGCCTAAGAAGCGCCCTTTGCTGC GTACTCTTATATTCTGACTGTCTGATTTGAAATATGTCGACAATAATGGAACAACCTTTT TATGACGACTCGTTTCTCTCTGCTTATGGCCATCCAGGCGCAGCTCTGCCAGACTACAAA CTGCTAAAGCAGAATATGAACTTGAACTTCGCCGATTCATATCGGAACTCAAACTTCAAG TCGCAACAGCACCTTCGCGCCGACAGTGATTTCTATTCTTCGGGGACGGACGTGGGNTCC CTGAAACTCGCTTCTCCTGAACTGGAGCGGCTGATCATCCAAAACAGCAACGGGGTCATC ACTACAACACCCACACCTGCCCATTACCTTTACAATCGGGGTATCACGGAGGAGCAGGAG GGCTTCGCTGACGGCTTCGTCAAAGCATTGGACGACTTACACAAGATGAATCAGATGGCT CCTCCGAACGTGTCCATCGGTACCGGCGGCGTTCCCTGTCCGGCACCGGCAACCGTGTAC GGGTCATCCATGCAGCCCGAGCCCCTAGAGTACACCACCTTGAGCAGCTGCACCACAAAC TCCAGCCTCTCATCTGCAGCCAGCTACCCGTGCACCACTATCAGCTACCTGCCGCACCAC CAGTACCACCCGCACTCCCAGGGTGTTGCG



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)