Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2586 cluster # 2586       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2586#0 length = 925 sequences # 8  

consensusID : consensus_2586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 925
fasta sequence
                              [AGCGGGGAAATCACTTCGGGAAACACGTTGGTTTGTGGCATTTGACTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC-GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAAATCA-TACCCCACGGTGTGTGGACACACAGGCCCAGTGTTGGACATTGAATGGTGCCCCCACAACGATCAGGTCATTGCCAGCGGCTCTGAGGACTGCACAGTGATGGTTTGGCAGATTCCTGAGAATGGGCTTGTCACCCCCATGGCTGAGCCTGTAGTGGTACTGGAAGGCCACTCCAAGCGCGTCGGCATTATTACATGGCACCCCACAGCACGCAACGTCCTCCTGAGTGCAGGTTGCGACAACCAAATCATCATCTGGAACGTGGGCACAGGCCAGGCTATGATTTCCCTGGAGGACATGCACCCTGATGTCATTTACAGGGCGGGCTGGAATCGCAACGGGAGCCTCATCTGCACCTCCTGCAAAGACAAGGCTATCCGCGTCATCGACCCCCGGAAGGAGGAGATCGTTGCCGAGAAGGAGAGAGCACACGAAGGCGCACGACCCATGAGAGCCATTTTCCTGTCTGATGGGAACGTCCTCACGACGGGTTTCAGTCGTCTCAGTGAGAGACAGTTGGCCCTCTGGAATGTGCAAAACATGGAGGAGCCCATGAATGTAACTGAGACGGACCCCAGCAACGGAGTGTTCCTGCCTTTCTATGACCCAGACACCAGTGTA]

[+] EMBL CA589584             [AGCGGGGAAATCACTTCGGGAAACACGTTGGTTTGTGGCATTTGACTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAAATCA TACCCCACGGTGTGTGGACACACAGGCCCAGTGTTGGACATTGAATGGTGCCCCCACAACGATCAGGTCATTGCCAGCGGTTCTGAGGACTGCACAGTGATGGTTTGGNAGATTCCTGAGAATGGGCTTGTCACCCCCATGGNTGAGNCTGTAGTGGNACTGGAAGGGNCCCTCCAGCGCGTCGGNTTTATTACATGGNNCCCCCNAGAACGAAACGaa                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0061957            [ GCGGGGAAATCACTTCGGGAAACACGTTGGTTTGTGGCATTTGAGTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAGGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAAATCA TACCCCACGG GGGGGGACACACAGGCCCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BU807979             [     GGAAATCACTTCGGGAAACACGTTGGTTTGCGGCATTTGACTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTTTATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAAATCA TACCCCACGGTGTGTGGACACACAGGCCCAGTGTTGGACATTGAATGGTGCCCCCACAACGATCAGGTCATTGCCAGCGGCTCTGAGGACTGCACAGTGATGGTTTGGCAGATTCCTGAGAATGGGCTTGTCACCCCCATGGCTGAGCCTGTAGTGGTACTGGAAGGCCACTCCAAGCGCGTCGGCATTATTACATGGCACCCCACAGCACGCAACGTCCTCCTGAGTGCAGGTTGCGACAACCAAATCATCATCTGGAACGTGGGCACAGGCCAGGCTATGATTTCCCTGGAGGACATGCACCCTGATGTCATTTACAGGGCGGGCTGTAATCGCAACGGG                                                                                                                                                                                                                                                                                       ]
[+] EMBL FR0061285            [                       CACGTTGGTTTGTGGCATTGGACTCGGCTTTCGGAAATACTCTTAGCTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAAATCATTACCCCACGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0059156            [                        ACGTTGGTTTGTGGCATTTGACTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATGTGTTCAAACGAGTTGTACGACAGAGCAAATTCCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGGCGATGCCAGTGGAGGCGGAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0059615            [                               TTTGTGGCATTTGACTCGGCTTTCGGAAATACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCGTCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAGGGTCAC GTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGATGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGGTAAATCA TACCCCACGGTGTGGGGGCACACAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0058673            [                                                           ATACTCTTAG GGGGGGGCAGCAGATATGTTCAAACGAGCTGCACGACAGAGCAAATTTCGTCACGTCTCCGGCCAGGCGTCTAAGAATGACCAATGCTACGATTATATCCGGGCGTCATGGGTCACTGTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGCCGATGCCAGTGGAGGCGGCGCTTGCCTTGTTCTCCCTCTTAATAAGACGGG CGCATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA589976             [                                                                                                                                                                                                                                                                                                 ACGCATTGATAAATCA TACCCCACGGTGTGTGGACACACGGGCCCAGTGTTGGACATTGAATGGTGCCCCCACAACGATCAGGTCATTGCCAGCGGCTCTGAGGACTGCACAGTGATGGTTTGGCAGATTCCTGAGAATGGGCTTGTCACCCCCATGGCTGAGCCTGTAGTGGTACTGGAAGGCCACTCCAAGCGCGTCGGCATTATTACATGGCACCCCACAGCACGCAACGTCCTCCTGAGTGCAGGTTGCGACAACCAAATCATCATCTGGAACGTGGGCACAGGCCAGGCTATGATTTCCCTGGAGGACATGCACCCTGATGTCATTTACAGTGCGGCCTGGAATCGCAACGGGAGCCTCATCTGCACCTCCTGCAAAGACAAGGCTATCCGCGTCATCGACCCCCGGAAGGAGGAGATCGTTGCCGAGAAGGAGAGAGCACACGAAGGCGCACGACCCATGAGAGCCATTTTCCTGTCTGATGGGAACGTCCTCACGACGGGTTTCAGTCGTCTCAGTGAGAGACAGTTGGCCCTCTGGAATGTGCAAAACATGGAGGAGCCCATGAATGTAACTGAGACGGACCCCAGCAACGGAGTGTTCCTGCCTTTCTATGACCCAGACACCAGTGTA]


>consensus_2586#0 AGCGGGGAAATCACTTCGGGAAACACGTTGGTTTGTGGCATTTGACTCGGCTTTCGGAAA TACTCTTAGTTTCCTCCCAGCAGATATGTTCAAACGAGTTGTACGACAGAGCAAATTTCG TCACGTCTTCGGCCAGGCGGCTAAGAATGACCAATGCTACGATGATATCCGGGTGTCAAG GGTCACGTGGGACAGCGCCCTCTGCACAGTCAACCCTACATTCGTTGCCATAATCGTCGA TGCCAGTGGAGGCGGAGCTTTCCTTGTTCTCCCTCTTAATAAGACGGGACGCATTGATAA ATCATACCCCACGGTGTGTGGACACACAGGCCCAGTGTTGGACATTGAATGGTGCCCCCA CAACGATCAGGTCATTGCCAGCGGCTCTGAGGACTGCACAGTGATGGTTTGGCAGATTCC TGAGAATGGGCTTGTCACCCCCATGGCTGAGCCTGTAGTGGTACTGGAAGGCCACTCCAA GCGCGTCGGCATTATTACATGGCACCCCACAGCACGCAACGTCCTCCTGAGTGCAGGTTG CGACAACCAAATCATCATCTGGAACGTGGGCACAGGCCAGGCTATGATTTCCCTGGAGGA CATGCACCCTGATGTCATTTACAGGGCGGGCTGGAATCGCAACGGGAGCCTCATCTGCAC CTCCTGCAAAGACAAGGCTATCCGCGTCATCGACCCCCGGAAGGAGGAGATCGTTGCCGA GAAGGAGAGAGCACACGAAGGCGCACGACCCATGAGAGCCATTTTCCTGTCTGATGGGAA CGTCCTCACGACGGGTTTCAGTCGTCTCAGTGAGAGACAGTTGGCCCTCTGGAATGTGCA AAACATGGAGGAGCCCATGAATGTAACTGAGACGGACCCCAGCAACGGAGTGTTCCTGCC TTTCTATGACCCAGACACCAGTGTA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)