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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2610#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1073 fasta sequence
[CGGTCCCAGGGAAGGTGATCCCGGCCGGTCCAGGCGTCTGTCTCATAAGCCGACACTAGCAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGC-CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACCACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCCATCTTTGTCCTCCACGCATGTGCACACAACCCCACTGGTACTGACCCAACTGAGGAGGAGTGGAAGAAGATCGCAAAGGTCATGAAGAGGAGGAAACTCTTTGTGTTCTTCGACTCGGCTTACCAGGGCTTTGCCTCCGGCAGCCTGGATAAAGATGCCTGGGCAATCCGTTACTTTGTCTCTGAGGGCTTTGAGCTGTTTGTGGCTCAATCCTTCTCCAAGAACTTTGGGCTTTACAATGAGAGAGTTGGGAGCCTGACTGTGGTTGCCCATGACAACGAGAACCTGACCCGCATCCTGTCCCAGATGGAGAAGATCGTTAGGACAACTTGGTCCAACCCACCTTCGCAGGGAGCACGCATCGTCAGCAAGACACTCAATTCTCCCGAGCTCTTTGCTGAATGGAAGGACAACG]
[+] EMBL BU805015 [CGGTCCCAGTGAAGGTGATCCCGGCCGGTCCAGTCGTCTGTCTCATAAGCCGACACTAGCAACACCTCCACCCGAACGTCCTTCAGTTGTCCGGGGATCATCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCCGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGAACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCCGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACTACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGAT ]
[+] EMBL CA846322 [ GCACGTTGATCCCGGCCGGTCCAGGCGTCTGTCTCATAAGCCGACACTATCAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGAGCAGAGTTTCTGCGGCGCTGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACCACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCCATCTTTGTCCTCCACGCATGTGCACACAACCCCACTGGTACTGACCCAACTGAGGAGGAGTGGAAGAAGATCGCAAAGGTCATGAAGAGGAGGAAACTCTTTGTGTTCTTCGACTCGGCTTACCAGGGCTTTGCCTCCGGCAGCCTGGATAAAGATGCCTGGGCAATCCGT ]
[+] EMBL CA846246 [ GCAGGTGATCCCGGCCGGTCCAGGCGTCTGTCTCATAAGCCGACACTAGCAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGAGCAGAGTTTCTGCGGCGCTGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACCACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCCATCTTTGTCCTCCACGCATGTGCACACAACCCCACTGGTACTGACCCAACTGAGGAGGAGTGGAAGAAGATCGCAAAGGTCATGAAGAGGAGGAAACTCTTTGTGTTCTTCGACTCGGCTTACCAGGGCTTTGCCTCCGGCAGCCTGGATAAAGATGCCTGGGCAATC ]
[+] EMBL CA591095 [ GTGATCCCGGCCGGTCCAGGCGTCTGTCTCATAAGCCGACACTAGCAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTAC ]
[+] EMBL FR0063181 [ CATAAGCCGACACTAGCAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCAGCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGGAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGGCTGCCAAA ]
[+] EMBL FR0063550 [ CAACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGCGCTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGC ]
[+] EMBL FR0063153 [ TCCTTCAGCTGTCCGGGGATCAGCCGC CTCCGTCATGTCCATTTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCGGGAGGACGACCACCAGCAGAAGGTGAACCTGGGAGTTGGAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACG ]
[+] EMBL CA333502 [ TGTGCACACAACCCCACTGGTACTGACCCAACTGAGGAGGAGTGGAAGAAGATCGCAGAGGTCATGAAGAGGAGGAAACTCTTTGTGTTCTTCGACTCGGCTTACCAGGGCTTTGCCTCCGGCAGCCTGGATAAAGATGCCTGGGCAATCCGTTACTTTGTCTCTGAGGGCTTTGAGCTGTTTGTGGCTCAATCCTTCTCCAAGAACTTTGGGCTTTACAATGAGAGAGTTGGGAGCCTGACTGTGGTTGCCCATGACAACGAGAACCTGACCCGCATCCTGTCCCAGATGGAGAAGATCGTTAGGACAACTTGGTCCAACCCACCTTCGCAGGGAGCACGCATCGTCAGCAAGACACTCAATTCTCCCGAGCTCTTTGCTGAATGGAAGGACAACG]
consensusID : consensus_2610#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[TTTAGGACTGACTGACTGACTCAAACATGGACGTGACCATGCTCGAATCCCTCTGGCGGCACCTGGCTGACTAACGGCCTGATATCTGACACCCCTGAGCAGCAGCAGGGGGACGTGTTCAGGGATTAAACACAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACTACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCCATCTTTGTCCTCCACGCATGTGCA]
[+] EMBL CA332917 [TTTAGGACTGACTGACTGACTCAAACATGGACGTGACCATGCTCGAATCCCTCTGGCGGCACCTGGCTGACTAACGGCCTGATATCTGACACCCCTGAGCAGCAGCAGGGGGACGTGTTCAGGGATTAAACACAGCTTACCGTACCGATGACTGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGCAGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCCAAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAGTCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTACAATGGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAACGGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACTACTGGGATGCTGCTAAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCCATCTTTGTCCTCCACGCATGTGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2610#0 CGGTCCCAGGGAAGGTGATCCCGGCCGGTCCAGGCGTCTGTCTCATAAGCCGACACTAGC 60
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 AACACCTCCACCCGAACGTCCTTCAGCTGTCCGGGGATCATCCGCCTCCGTCATGTCCAT 120
consensus_2610#1 -------------------TTTAGGACTGACTGACTGAC-TCAAACATGGACGTGACCAT 40
* *** * * * ** * * * ** ****
consensus_2610#0 TTTCAGCGATGTCCCTCAGGCGCCGCCGGTCGCAGTCTTCAAGCTGACGGCTGATTTCCG 180
consensus_2610#1 GCTCGA----ATCCCTCTGGCGGCACCTGGC-TGACTAACGGCCTGATATCTGACACCCC 95
** ****** **** * ** * * * **** **** **
consensus_2610#0 GGAGGACGACCACCAGCAGAAGGTGAACCTGGG--AGTTGGAGCTTACCGTACCGATGAC 238
consensus_2610#1 TGAGC---AGCAGCAGGGGGACGTGTTCAGGGATTAAACACAGCTTACCGTACCGATGAC 152
*** * ** *** * * *** * ** * *******************
consensus_2610#0 TGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGC 298
consensus_2610#1 TGCCAGCCTTGGGTGCTACCGGTAGTGAAAAAGGTGGAGCAGCTGATTGTGGAGGACTGC 212
************************************************************
consensus_2610#0 AGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCC 358
consensus_2610#1 AGCCTGAACCACGAGTACCTTCCCATCCTTGGCCTGCCAGAGTTCCGCTCCGCTGCTGCC 272
************************************************************
consensus_2610#0 AAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAG 418
consensus_2610#1 AAGGTTGCCCTGGGAGACGACAACCCCGCCATCAAGGAGAGCCGGGTGGGAGGGGTCCAG 332
************************************************************
consensus_2610#0 TCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTACAAT 478
consensus_2610#1 TCTTTGGGCGGGACTGGAGCATTGAGGATGGGGGCAGAGTTTCTGCGGCGCTGGTACAAT 392
************************************************************
consensus_2610#0 GGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAAC 538
consensus_2610#1 GGTGTCAACAACATGACAACCCCCGTCTATGTGTCGGCACCCACCTGGGAAAACCACAAC 452
************************************************************
consensus_2610#0 GGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACCACTGGGATGCTGCT 598
consensus_2610#1 GGTGTGTTCGCTGATGCTGGTTTTAAAGATATCCGCCCTTATCACTACTGGGATGCTGCT 512
********************************************* **************
consensus_2610#0 AAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCC 658
consensus_2610#1 AAAAGGGGTCTGGACATCAGTGGGCTCCTGGATGACCTGGAGAAAGCTTCAGAACACTCC 572
************************************************************
consensus_2610#0 ATCTTTGTCCTCCACGCATGTGCACACAACCCCACTGGTACTGACCCAACTGAGGAGGAG 718
consensus_2610#1 ATCTTTGTCCTCCACGCATGTGCA------------------------------------ 596
************************
consensus_2610#0 TGGAAGAAGATCGCAAAGGTCATGAAGAGGAGGAAACTCTTTGTGTTCTTCGACTCGGCT 778
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 TACCAGGGCTTTGCCTCCGGCAGCCTGGATAAAGATGCCTGGGCAATCCGTTACTTTGTC 838
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 TCTGAGGGCTTTGAGCTGTTTGTGGCTCAATCCTTCTCCAAGAACTTTGGGCTTTACAAT 898
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 GAGAGAGTTGGGAGCCTGACTGTGGTTGCCCATGACAACGAGAACCTGACCCGCATCCTG 958
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 TCCCAGATGGAGAAGATCGTTAGGACAACTTGGTCCAACCCACCTTCGCAGGGAGCACGC 1018
consensus_2610#1 ------------------------------------------------------------
consensus_2610#0 ATCGTCAGCAAGACACTCAATTCTCCCGAGCTCTTTGCTGAATGGAAGGACAACG 1073
consensus_2610#1 -------------------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |