Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2618 cluster # 2618       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2618#0 length = 1098 sequences # 9  

consensusID : consensus_2618#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1098
fasta sequence
                              [GTTTTCAGTTCCTTTTGTTGCGCGTCAGGCATAAAAGTACAAACTCGACTGTTGCCATTCTTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAGAGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAATCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCTTATATCTGCTTATAACACATTTTACTCCACTCATTTATCTGTTTATTTTTAGTTGGTTAGAGGTTCTTTATTGACAATTGGGATTGATTCTAAAACCTTTTCTGTAGTAGAAAACAATCCAAGAGGATTTTAAAAGAAAGTGTAATTCATTTGAATATTGCAGGATTTATACATTTTTATGATGCCTATAAATTACTGTGATCTCTCAAACCAGAATAGTTATTAACTTTGTGCATGCGCTTATTAAAAACAACAAATTAAAACAATGATATTAAAACAAAATGTTCTGCTTTTATTGGGCAATAAACTTTTTAAAGCC]

[+] EMBL CA589822             [GTTTTCAGTTCCTTTTGTTGCGCGTCAGGCATAAAAGTACAAACTCGACTGTTGCCATTCTTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA588985             [                GTTGCGCGTCAGGCATAAAAGTACAAACTCGACTGTTGCCATTCTTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA846838             [                                      ACAAACTCGACTGTTGCCATTCTTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA591669             [                                        AAACTCGACTGTTGCCTTTCTTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAGAGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAATCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCTTATATCTGCTTATAACA                                                                                                                                                                                                                                                                                                              ]
[+] EMBL FR0056469            [                                                                             TGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAGACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAGTCAAGTCTCTGGAGGAGCAAGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGACAGAATATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0056447            [                                                                                 TCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGACCGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCGCTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGGCCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGAGCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCAGATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAGGGACACGTCATCAGAGGAGAAAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0056097            [                                                                                                                                                                                                                                                                                                                                                                                             CATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACACCTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAAGTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAGAGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAATCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCCTATATCTGCTTATA                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA332233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGTGTGATGAGCGTGGGTTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAGAGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAATCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCTTATATCTGCTTATAACACATTTTACTCCACTCATTTATCTGTTTATTTTTAGTTGGTTAGAGGTTCTTTATTGACAATTGGGATTGATTCTAAAACCTTTTCTGTAGTAGAAAACAATCCAAGAGGATTTTAAAAGAAAGTGTAATTCATTTGAATATTGCAGGATTTATACATTTTTATGATGCCTATAAATTACTGTGATCTCTCAAACCAGAATAGTTATTAACTTTGTGCATGCGCTTATTAAAAACAACAAATTAAAACAATGATATTAAAACAAAATGTTCTGCTTTTATTTGGCAATAAACTTTTTA     ]
[-] EMBL CA331832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGTACCAGGCGGAGCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGGATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAGAGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAATCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCTTATATCTGCTTATAACACATTTTACTCCACTCATTTATCTGTTTATTTTTAGTTGGTTAGAGGTTCTTTATTGACAATTGGGATTGATTCTAAAACCTTTTCTGTAGTAGAAAACAATCCAAGAGGATTTTAAAAGAAAGTGTAATTCATTTGAATATTGCAGGATTTATACATTTTTATGATGCCTATAAATTACTGTGATCTCTCAAACCAGAATAGTTATTAACTTTGTGCATGCGCTTATTAAAAACAACAAATTAAAACAATGATATTAAAACAAAATGTTCTGCTTTTATTGGGCAATAAACTTTTTAAAGCC]


>consensus_2618#0 GTTTTCAGTTCCTTTTGTTGCGCGTCAGGCATAAAAGTACAAACTCGACTGTTGCCATTC TTATTTGTGAACGGCCTTGAATCCTCACCTGAAGTAAGGTGTAAAGATGGACCCAGAGAC CGCAAACCAGCCTCTTATCACAGGCAACGCAGCCGTCAACGAGCCACCAAATGGCGGCCG CTCAACTCGTGCCTACAAAGTGGCAGGTATCACCCTGTTGGCCTGTGTTCTGATCGCGGG CCAGGTCATGACTGCCTACTTCCTCCTTGCCCAGAAAGGTGAAATCAAGTCTCTGGAGGA GCAGGGCAACAAGCTAAAATCTGTGATGACCAATGGAAGATCTGCAGCTTCCCCCAGCCA GATGCGCATACCAGCCAACTCCATTGCCGGGCTGTATGACGTGTCTCTGGACAAGGACAC CTCATCAGAGGAGAAAGAAAATCCAGCCACAGACTGCCAGCTGAAGGCCCTCGGACTGAA GTCCACGGGGCTTCCAGGGTTTCGCCCCGTGTGTGATGAGCGTGGGTTGTACCAGGCGGA GCAGTGCTTCAAGAGTCAGTGCTGGTGTGTCAGCCCTAAAGATGGACAGGCTATCTCTGG ATCCATGCACAGAGGACGGGCCAGCTGCACTTCTGCAGTCGCATCTGGCAGCATGTTCAG AGCCATGAGTGTGCCTGAATAAAACAGGGATTTAGGGTTCTTCCTCTGACACTGGTAGAA TCTCTACAAGACAACTCCCGCTCCATCTGCTTTATCTGCTCAGAAATCAGTGATTTGCTT ATATCTGCTTATAACACATTTTACTCCACTCATTTATCTGTTTATTTTTAGTTGGTTAGA GGTTCTTTATTGACAATTGGGATTGATTCTAAAACCTTTTCTGTAGTAGAAAACAATCCA AGAGGATTTTAAAAGAAAGTGTAATTCATTTGAATATTGCAGGATTTATACATTTTTATG ATGCCTATAAATTACTGTGATCTCTCAAACCAGAATAGTTATTAACTTTGTGCATGCGCT TATTAAAAACAACAAATTAAAACAATGATATTAAAACAAAATGTTCTGCTTTTATTGGGC AATAAACTTTTTAAAGCC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)