Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2619 cluster # 2619       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2619#0 length = 660 sequences # 9  
consensusID : consensus_2619#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 660
fasta sequence 
                              [TGGAGTAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAGAGGAGAGCCCACTGGCAAGGAGACCTGGCCTGCTGGATAAACCTGATTGTAATTAAAGCT]

[+] EMBL CA331878             [TGGAGTAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCACTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATCGTGAAACAGAGCGAGACATCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGTTTGATGACTGAGGGGCGTAACAATCCTC                                                                                                                  ]
[+] EMBL CA331954             [   AGTAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGTTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAGAGG                                                         ]
[+] EMBL CA331736             [   AGTAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCACTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGGTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATCGTGAAACAGAGCGAGACATCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACCCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGAACGGGGTATGATGACTGAGAGGCGTAGCCATCCTCCAGAACAAACACAAAATCCTGATTTTGCTCCTC                                                                                 ]
[+] EMBL CA331868             [     TAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAGAGG                                                         ]
[+] EMBL CA332106             [      AAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGTTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAATCCTGATTTTGCTCCTCCAGAGAGACACCCACATACAGAGGAGAGCC                                                   ]
[+] EMBL CA331908             [      AAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGTTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAATCCTGATTTTGCTCCTCCAGAGAGACACCCACATACAGAGGAGAGCC                                                   ]
[+] EMBL CA331708             [       AAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCAATCCTCCAGAACAACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAGAGG                                                         ]
[+] EMBL CA332038             [        AATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCACTAAGTGAATGGATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATTACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTTCCTGCTGTACTGGTTCTGGGTCAGAAACAAAAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAACAATCCTCCAGAACAACCACAAAACCCTGATGTTGCTCCTCCAGAAA                                                                           ]
[+] EMBL CA329191             [           AAGTCAATTTTATTTCATGCAACGCACCAAATTTATCACATTACACTTAAAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATGGTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGCAGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTCCCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGACGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCTGCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACGAGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTTGTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCAATCCTCCAGAAC ACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAGAGGAGAGCCCACTGGCAAGGAGACCTGGCCTGCTGGATAAACCTGATTGTAATTAAAGCT]




>consensus_2619#0
TGGAGTAAAATAAGTCAATTTTATTTCATGCAACGCAGCAAATTTATCACATTACACTTA
AAAGACCAACACCATTATTGTCAATAAATTCATTAAGTGAATGAATAATTAATCAATATG
GTTTGTCACAAATCATGTATTTATACAAAGAGGTGCTACAAGCCGGAGATTGATATGTGC
AGTTTTTATGTCGCTGGAAGGACGTTTGTAGAAGAGGGTTGTTTGCTCATATCACTTGTC
CCAGATGATCGGTCCAACCGAGACTGGTTTTAGAACTTCAGATTGTGAAACAGAGCGAGA
CGTCCTGCCTGTGCAACGAGGTACACAGGAAGATGCTCTTTGGTTACACAGACTGAGGCT
GCAGTGAAGGTACTCGCTGCTGTACTGGTTCTGGGTCAGAAACAACAGGGCTGAAAAACG
AGCCCGCAGGGATACGCCACTCTCAGTCACAGCCACCCGACGACGGTCAGTGGGACACTT
GTTCCGGATGAGGTACTCCCGCGTGGGGTGATCGGGGCTTGATGACTGAGAGGCGTAGCA
ATCCTCCAGAACAACCACAAAGCCCTGATATGGCTCCTCCAGAGAGACACCCACATACAG
AGGAGAGCCCACTGGCAAGGAGACCTGGCCTGCTGGATAAACCTGATTGTAATTAAAGCT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)